MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-055H17
Chromosome	1 (Build37)
Map Location	191,589,828 - 191,590,732
singlet/doublet	singlet
Overlap gene	Ptpn14
Upstream gene	Ush2a, Kctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf
Downstream gene	LOC100042438, Smyd2, Prox1, LOC100039394, EG666975
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ush2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22283 MGI:1341292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kctd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226823 MGI:2444629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16526 MGI:109366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042424 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 3 Proteins

name	LOC100039307 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cenpf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108000 MGI:1313302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptpn14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19250 MGI:102467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042438 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042438
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Smyd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226830 MGI:1915889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19130 MGI:97772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039394 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG666975 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666975 MGI:3648155
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ush2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84662723 GeneID:22283 MGI:1341292
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Usher syndrome 2A (autosomal recessive, mild) homolog (human) transcript_id : NM_021408.2

name	Kctd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46255027 GeneID:226823 MGI:2444629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel tetramerisation domain containing 3 transcript_id : NM_172650.2

name	Kcnk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754431 GeneID:16526 MGI:109366
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 2 transcript_id : NM_010607.1

name	LOC100042424 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149247240 GeneID:100042424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 3 Proteins product : similar to TF-1 apoptosis related protein 19 transcript_id : XM_001478256.1

name	LOC100039307 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149247218 GeneID:100039307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039307 transcript_id : XM_001472640.1

name	Cenpf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486916 GeneID:108000 MGI:1313302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein F transcript_id : NM_001081363.1

name	Ptpn14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110825985 GeneID:19250 MGI:102467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 14 transcript_id : NM_008976.2

name	Smyd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30840983 GeneID:226830 MGI:1915889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET and MYND domain containing 2 transcript_id : NM_026796.1

name	Prox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543512 GeneID:19130 MGI:97772
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prospero-related homeobox 1 transcript_id : NM_008937.2

name	EG666975 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364753 GeneID:666975 MGI:3648155
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG666975 transcript_id : XM_987363.1

name	Ush2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84662724 CCDS:CCDS15607.1 GeneID:22283 MGI:1341292
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 exception : mismatches in translation product : usherin protein_id : NP_067383.2

name	Kctd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369936 CCDS:CCDS15608.1 GeneID:226823 MGI:2444629
definition	codon_start : 1 product : potassium channel tetramerisation domain containing 3 protein_id : NP_766238.1

name	Kcnk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754432 GeneID:16526 MGI:109366
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IDA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IDA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IDA] [Evidence IEA]; GO:0030322 - stabilization of membrane potential [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : potassium channel, subfamily K, member 2 protein_id : NP_034737.1

name	LOC100042424 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149247241 GeneID:100042424
definition	codon_start : 1 product : similar to TF-1 apoptosis related protein 19 protein_id : XP_001478306.1

name	LOC100039307 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149247219 GeneID:100039307
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472690.1

name	Cenpf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486917 GeneID:108000 MGI:1313302
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence ISS]; GO:0000776 - kinetochore [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0045120 - pronucleus [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0016202 - regulation of striated muscle development [Evidence IDA] codon_start : 1 note : centromere autoantigen F product : leucine, glutamic acid, lysine family 1 protein protein_id : NP_001074832.1

name	Ptpn14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110825986 CCDS:CCDS15609.1 GeneID:19250 MGI:102467
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : protein tyrosine phosphatase, non-receptor type 14 protein_id : NP_033002.2

name	Smyd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30840984 GeneID:226830 MGI:1915889
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : SET and MYND domain containing 2 protein_id : NP_081072.1

name	Prox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679483 GeneID:19130 MGI:97772
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0001709 - cell fate determination [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0045446 - endothelial cell differentiation [Evidence IMP]; GO:0001945 - lymph vessel development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : prospero-related homeobox 1 protein_id : NP_032963.1

name	EG666975 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364754 GeneID:666975 MGI:3648155
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992457.1

name	LOC100042438 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042438
definition	number : 1 pseudo : _no_value

name	LOC100039394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039394
definition	number : 1 pseudo : _no_value

name	LOC100039394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039394
definition	number : 2 pseudo : _no_value

name	LOC100039394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039394
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128624
definition	standard_name : D1Mit274

name	(CDS detail)
type	STS
link
xref	UniSTS:178549
definition	standard_name : AU024699

name	(CDS detail)
type	STS
link
xref	UniSTS:178551
definition	standard_name : AI848635

name	(CDS detail)
type	STS
link
xref	UniSTS:116265
definition	standard_name : D1Mit362

name	(CDS detail)
type	STS
link
xref	UniSTS:162549
definition	standard_name : RH125803

name	(CDS detail)
type	STS
link
xref	UniSTS:128491
definition	standard_name : D1Mit153

name	(CDS detail)
type	STS
link
xref	UniSTS:123229
definition	standard_name : 14.MMHAP69FRE8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128770
definition	standard_name : D1Mit408

name	(CDS detail)
type	STS
link
xref	UniSTS:128508
definition	standard_name : D1Mit17

name	(CDS detail)
type	STS
link
xref	UniSTS:158906
definition	standard_name : AI325968

name	(CDS detail)
type	STS
link
xref	UniSTS:234302
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158905
definition	standard_name : D31842

name	(CDS detail)
type	STS
link
xref	UniSTS:234303
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234306
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128771
definition	standard_name : D1Mit409

name	(CDS detail)
type	STS
link
xref	UniSTS:128772
definition	standard_name : D1Mit409.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128450
definition	standard_name : D1Mit117

name	(CDS detail)
type	STS
link
xref	UniSTS:142260
definition	standard_name : D1Mit56

name	(CDS detail)
type	STS
link
xref	UniSTS:496835
definition	standard_name : Prox1

name	(CDS detail)
type	STS
link
xref	UniSTS:122945
definition	standard_name : RH118247

name	(CDS detail)
type	STS
link
xref	UniSTS:128584
definition	standard_name : D1Mit241

name	(CDS detail)
type	STS
link
xref	UniSTS:125609
definition	standard_name : Results_ER_9_5_95_44.seq

clone name	MSMg01-478K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016B17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-055H17.b	B6Ng01-055H17.g
ACC	DH877916	DH877917
length	1,052	910
definition	DH877916\|Mus musculus domesticus DNA, BAC clone: B6Ng01-055H17, 5' end.	DH877917\|Mus musculus domesticus DNA, BAC clone: B6Ng01-055H17, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ggaattctttgtttagttctgagccccattttttaatggggttatttgat tttctggagtccactttcttgagttctttatatatattggatattagtcc cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc tttttgtcttattgacggtgtcttttgccttacagaagctttgcagtttc atgaggtcccatttgtcaattctcaatcttacagcacaagccattgctgt tctattcaggaatttttcccctgtgccaatatcttcgaggcttttcccca ctttctcctctataagtttcagtgtctctggttttatgtggagttccttg atccacttagatttgaccttaggcaaatggttggacctggaagacatcat cctgagtgaggtaacacaatcacaaaagaactcaaatgatatgtactcac tgacaagtggatattagcccagaaacttagtatacccgagatataagata caatttgcaaaacacatgaaactgaagaacgaagaccaaagtgtggactt tgccccttcttagaattgggaacaatcacccatggaaggagttacagaga caaagttcagagctgagacaaaaggatggaccatctagagactgccatat ccagggatccatcccgtaatcagcctccaaatgatgacaccattgcatac actagcaagagtttgctgaaagaaccctgatatagctgtcttttgtgaga ctaggccggggcctagcaaacacagaagtggatgctcacagtcagctatt ggattgatcacagggcccccaatggaggagctagagaaagtacccaagga gctaatggggtctacaaccctttaggcagaacaacaatatgaactaacca gtaccctggagctcttgactctagttgcatatgtatcaaaagatggccta gtcgccatcactgggaagagaggcccattgacatgcaaactttatatgcc ccatacaggaacgcaggccaaaagtggggatgggtgctaggggatgtgag gg	gaattctcagttattcggagaggggtgagcaacccaccacttaagaacaa aatccacccaagctttgctcctcatagtaacgaaaacaaaagcatccagg tcctgaactcatgacagaatccaactgattaaagtcggctgataacttcc ttagtgagacactcactaagagcatgcttaaaacaagagtcagaaaggtg ttccagcagcacaggatttcaaccctagcattgacagattcgatgcttag aaatatttttttgtttacttcttggggggggggttcagcatggttcagga cagggtctctctgtgtagtcctggctgtcctagaacatgatctgcagacc agctgaccttgaactcacagagatccacccaactctgcttcccgagtgct gagattaaaggcaagcaaaatatttttgttttgtttaaaaaaaaaaaaaa aagagtggtttgtttataaagatggtaggaagagacacatgactgcatct atccacagaccattcagaggacagaaaactcaaacagaaaggagcatctc agacagagatgacggcaagttttgctgctgccttcagggacgtccttttg gcaaacagagaggaaaagctgcggagacctctccccttctagtcagctga agacaacccttctaatacaaagtgaccaggacaagtggtttacacaggaa gagctgtagtagcctgtgtggtatataacaacctgagatgtgagggtaca cagaataaattccatttgccacaggcctctcagacatcacagagaagaag gcaccttggttaccttggatcccacagatgcatgacctaaggtcttccct ctgtgggacactggagcctctagtcctttgtcttttacaagaagtcaaga taaatttact
quality values	Open. Hide. 23 61 30 24 39 61 47 32 50 50 47 47 50 50 36 35 47 55 55 47 21 22 11 20 22 55 55 15 22 19 20 19 28 29 13 18 16 28 44 59 59 61 61 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 52 37 36 44 59 59 59 59 61 59 61 59 61 61 55 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 52 55 61 61 61 61 61 61 61 61 61 61 52 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 49 61 55 55 61 61 61 61 61 61 55 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 50 61 61 50 61 47 53 50 61 61 42 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 45 61 38 47 61 61 61 61 61 47 61 31 61 61 61 52 61 61 61 50 61 61 61 61 57 53 57 53 50 57 53 45 57 57 53 57 52 39 50 50 57 57 45 53 53 50 53 45 57 32 53 57 53 46 24 47 50 32 42 47 47 50 57 50 32 57 57 53 45 53 38 53 53 53 53 43 53 43 47 50 50 57 45 37 24 53 45 53 38 52 45 42 57 57 36 43 38 41 28 53 47 47 41 45 31 33 35 32 52 41 35 52 57 50 57 37 22 47 47 42 50 45 29 53 50 45 31 53 52 24 53 38 52 38 34 40 32 50 21 35 50 50 28 50 36 35 50 53 24 35 57 53 50 32 53 42 52 57 36 25 53 23 36 52 52 47 53 40 35 30 40 33 15 23 53 40 42 50 42 57 57 41 31 24 30 52 25 34 14 38 33 34 39 17 52 48 57 57 33 28 57 36 48 14 33 36 53 43 33 35 39 21 21 53 53 29 32 53 17 33 22 44 32 42 39 34 41 31 32 34 36 31 29 37 37 31 31 32 14 5 28 29 20 37 36 31 34 28 36 18 14 44 29 46 46 45 51 44 31 25 27 23 29 37 26 29 48 21 31 32 28 23 31 25 33 51 33 29 29 23 29 45 31 29 28 33 28 27 14 28 35 25 18 19 48 51 46 40 32 41 34 27 29 15 30 24 46 23 15 5 14 22 30 38 15 28 20 19 33 11 15 26 30 15 26 29 28 33 28 32 13 28 29 41 12 32 23 16 12 8 28 29 51 28 26 22 24 26 14 27 21 10 23 30 28 31 19 10 25 17 29 33 33 26 23 26 10 4 6 12 22 22 14 6 7 20 41 51 12 5 4 4 7 8 17 27 24 34 9 23 7 11 8 24 28 27 10 11 16 28 25 36 15 24 11 6 21 6 24 8 30 10 38 20 26 17 10 24 5 8 15 33 33 17 28 38 19 27 28 51 22 16 12 11 22 19 15 51 31 14 13 4 4 7 7 25 9 16 22 6 6 22 10 8 20 6 14 13 44 39 33 9 12 8 35 22 9 35 28 25 38 22 15 26 6 21 13 14 30 22 13 9 7 5 5 7 5 7 28 7	Open. Hide. 61 61 52 49 61 61 61 21 12 12 25 18 13 37 31 25 30 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 59 52 37 28 30 30 37 39 59 59 61 61 59 55 61 61 61 61 61 55 61 59 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 59 59 61 61 59 61 59 61 61 61 61 61 59 59 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 59 59 49 61 61 59 59 61 61 61 61 61 59 61 59 59 59 61 61 59 59 49 59 61 61 61 61 61 49 52 52 52 44 52 52 52 39 59 59 43 59 41 59 59 52 61 59 61 61 61 59 61 59 59 59 59 61 59 59 59 59 59 59 59 59 59 45 61 52 52 52 59 59 61 61 59 59 59 59 59 61 52 49 61 61 61 59 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 61 59 61 61 59 61 61 61 59 61 55 61 55 61 61 61 61 55 52 55 41 61 41 49 61 55 52 55 43 55 55 52 52 43 52 52 52 52 49 52 52 61 61 39 52 52 55 55 55 52 61 52 55 52 52 55 52 55 55 61 61 61 61 61 14 33 31 23 32 43 50 43 19 27 19 11 33 27 61 61 61 61 55 43 49 61 61 55 61 47 40 49 55 55 55 23 21 21 8 8 15 37 26 26 25 49 50 50 35 35 39 23 34 27 43 37 37 31 29 9 50 31 35 45 50 24 45 50 39 47 27 50 50 39 39 50 18 8 43 50 43 53 43 47 50 45 50 53 52 61 47 43 53 26 16 61 53 50 50 28 39 43 35 32 50 53 52 53 37 31 18 34 14 22 13 11 50 19 45 32 39 39 39 42 27 35 39 34 28 27 28 27 34 8 27 28 52 38 45 32 50 50 52 45 40 43 45 42 33 14 18 22 19 19 38 45 28 47 61 9 52 17 27 47 45 50 52 33 39 52 24 42 43 29 20 27 20 45 39 39 27 45 40 31 42 21 32 29 47 27 14 47 27 36 41 33 34 30 10 30 37 30 43 30 28 52 53 52 42 53 18 18 20 20 7 10 10 7 10 20 52 19 19 39 30 40 24 53 10 10 30 50 24 30 14 52 43 21 29 36 23 13 16 36 16 39 40 17 10 10 29 35 52 29 27 30 39 24 32 14 21 37 21 21 27 25 9 42 24 32 22 30 42 40 42 52 32 14 21 15 19 8 50 33 30 53 38 32 30 31 7 35 19 20 30 39 21 23 28 6 45 9 29 14 11 12 34 28 53 14 24 39 31 16 9 31 8 28 23 12 13 26 5 14 25 24 23 38 14 53 26 19 20 24 8 32 24 40 29 36 17 18 28 24 18 7 18 25 12 25 10 21 8 38 34 40 33 24 35 24 29 13 21 37 23 32 15 13 21 6 27 24 21 14 28 21 21 41 34 30 13 29 28 19 21 41 17 23 14 34 29 14 9 9 11 10 9 6 31 15 20 11 20 36 27 24 9 29 10 18 14 16 12 12 22 11 17 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_191589828_191590732
seq2: B6Ng01-055H17.g_69_978 (reverse)

seq1  AGTAAATTTATCTTGACTTCCTGTCAAAGACAAAGGACTAGAGGCTCCCG  50
      |||||||||||||||||||| ||| ||||||||||||||||||||||| |
seq2  AGTAAATTTATCTTGACTTCTTGTAAAAGACAAAGGACTAGAGGCTCCAG  50

seq1  TGTCCCACAGAGGGAAGACCTTAGGTCATTGCATCTGTGGGATCCAAGGT  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTCCCACAGAGGGAAGACCTTAGGTCA-TGCATCTGTGGGATCCAAGGT  99

seq1  AACC-AGGTGCCTTC-TCTCTGTGATGTCTGAGAGGCCTGTGGCAAATGG  148
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  AACCAAGGTGCCTTCTTCTCTGTGATGTCTGAGAGGCCTGTGGCAAATGG  149

seq1  AA-TTATTCTGTGTACCCTCACATCTCAGGTTGTTATATACCACACAGGC  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCTGTGTACCCTCACATCTCAGGTTGTTATATACCACACAGGC  199

seq1  TACTACAGCTCTTCCTGTGTAAACCACTTGTCCTGGTCACTTTGTATTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGCTCTTCCTGTGTAAACCACTTGTCCTGGTCACTTTGTATTAG  249

seq1  AAGGGTTGTCTTCAGCTGACTAGAAGGGGAGAGGTCTCCGCAGC-TTTCC  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGGGTTGTCTTCAGCTGACTAGAAGGGGAGAGGTCTCCGCAGCTTTTCC  299

seq1  TCTCTG-TTGCCAAAAGGACGTCCCTGAAGGCAGCAGC-AAACTTGCCGT  344
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTCTGTTTGCCAAAAGGACGTCCCTGAAGGCAGCAGCAAAACTTGCCGT  349

seq1  CATCTCTGTCTGAGATGCTCCTTTCTGTTTGAGTTTTCTGTCCTCTGAAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGTCTGAGATGCTCCTTTCTGTTTGAGTTTTCTGTCCTCTGAAT  399

seq1  GGTCTGTGGATAGATGCAGTCATGTGTCTCTTCCTACCATCTTTATAAAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGGATAGATGCAGTCATGTGTCTCTTCCTACCATCTTTATAAAC  449

seq1  AAACCACTCTTTTTTTTTTTTTTTTAAACAAAACAAAAATATTTTGCTTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACTCTTTTTTTTTTTTTTTTAAACAAAACAAAAATATTTTGCTTG  499

seq1  CCTTTAATCTCAGCACTCGGGAAGCAGAGTTGGGTGGATCTCTGTGAGTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCTCAGCACTCGGGAAGCAGAGTTGGGTGGATCTCTGTGAGTT  549

seq1  CAAGGTCAGCTGGTCTGCAGATCATGTTCTAGGACAGCCAGGACTACACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCAGCTGGTCTGCAGATCATGTTCTAGGACAGCCAGGACTACACA  599

seq1  GAGAGACCCTGTCCTGAACCATGCTGAACCCCCCCCCCAAGAAGTAAACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCCTGTCCTGAACCATGCTGAACCCCCCCCCCAAGAAGTAAACA  649

seq1  AAAAAATATTTCTAAGCATCGAATCTGTCAATGCTAGGGTTGAAATCCTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATTTCTAAGCATCGAATCTGTCAATGCTAGGGTTGAAATCCTG  699

seq1  TGCTGCTGGAACACCTTTCTGACTCTTGTTTTAAGCATGCTCTTAGTGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGGAACACCTTTCTGACTCTTGTTTTAAGCATGCTCTTAGTGAG  749

seq1  TGTCTCACTAAGGAAGTTATCAGCCGACTTTAATCAGTTGGATTCTGTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACTAAGGAAGTTATCAGCCGACTTTAATCAGTTGGATTCTGTCA  799

seq1  TGAGTTCAGGACCTGGATGCTTTTGTTTTCGTTACTATGAGGAGCAAAGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAGGACCTGGATGCTTTTGTTTTCGTTACTATGAGGAGCAAAGC  849

seq1  TTGGGTGGATTTTGTTCTTAAGTGGTGGGTTGCTCACCCCTCTCCGAATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGATTTTGTTCTTAAGTGGTGGGTTGCTCACCCCTCTCCGAATA  899

seq1  ACTGAGAATTC  905
      |||||||||||
seq2  ACTGAGAATTC  910

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information