BAC Information

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BAC

Clone NameB6Ng01-055L17
Chromosome1 (Build37)
Map Location 110,850,876 - 110,851,814
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435640, EG626474
Downstream geneEG666508
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055L17.bB6Ng01-055L17.g
ACCDH878095DH878096
length1,182739
definitionDH878095|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L17, 5' end.DH878096|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagagaagactacaccatttttttatctaataactaatggtta
gccatgaaatcatataaatacaagtaacatataactgggctgtatatgaa
acacacacacacacacacacacacacacacacacaaacaaacaaacatta
atgtaaaacaggccataatttgaagaagagcaaggagcaaggatttagag
ggagaaatggaatggagaaaatttttaattacattataatctcaaaataa
ataaagaacagcccaacttaagaaaaaatctgacaaagaactagatatag
gagttcttaaaatatgaaatgcaaatggccattaatactttaaaaatttt
tgacatccttagccatcaaataaatataaatcaaaagtatgttcagattt
tattgtcttagtcacaatggccaagatcaaagaaacaaatgacaattttg
gtgaggagtgtgggaaaagggaacacctattcacagatcttgtaggaaaa
atctggaagccactgtaaaaacaaatgtgaatgttcatctgatatttaga
aacatgcattctagatcaactgataccactactggaataataaacaaagg
actctttatcctactacaatgatttaataatctatgttcatcttgtgtta
tccaaaatagccagaaaatgaatacaatgaattgtccattatttcatgat
tggacaataaaaatatggtacatttaaataatgaaatatgattctcctgt
aaaaatatttttcaaatatattgttgtattgttctctgctaaggagcttt
tagagtgtatttacatccacttcaggtcttatctatctatttttcttatg
gcaaattataaaacattttctctgtttttaatcaattttatatttcattt
tatatgtataaatagtttgcctacatgttttgtctgtgtacagcatggat
tcactgcctattgatgttagaagagggtatcagatcccttgaactggaag
atatagatagttgtaagcagtattgtgagtatggcaatgatacttctatc
ctcaggaagagtatacaattgctcttaagcactgagccatctctccgcca
caattaattattcgtgaaaactgcttttttggcttcaaatattaccataa
agatttttaaattttaagattaggtttttttt
gaattcagaactcttcagctggggaacggtggtaatgaagtgttcccgta
acacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaatggtggtaatgaagtgttcatgaaacacagactgttgagaagg
attcaactgtgtgaattcagaactcttcagctggggaacagggtacccgt
aagtatagctttacaaggtaagtctggccttgaactttctaacgaaattc
aagacagtctatcagaagtaaagtgggaaatagctttacaaggtaagtct
ggtcttgaactttctaacaaaattcaagacagtctatcagaagtaaagtg
ggaaatagctttacaaggtatgtttggccttgaactttttctagtgttag
gagcctttttgttccttttcacatgttatcaagcggttaaggcagggctg
aaaattctggatgaaattcagggcaatctatcagaagtaacgcggggaga
gagagtaggagcaaagaggaaatatggtacacaaaataagtatacaggcc
tttccacgggtcttgaacctgaggaaaagtttaggtcaggtaagaatacc
tggggagagattggaaggaaggagaagggtttcggcaccaactcttaccc
gcgttctcgcgaccggccaggaagaacgcaacaaaccggaatcttctgcg
gcaaaagctttatttgcttacatctttcaggagcaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110850876_110851814
seq2: B6Ng01-055L17.b_304_1227

seq1  CAGCCCAACTTAAGAAAAAATCTGACAAAGAACTAGATATAGGAGTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAACTTAAGAAAAAATCTGACAAAGAACTAGATATAGGAGTTCTT  50

seq1  AAAATATGAAATGCAAATGGCCATTAATACTTTAAAAATTTTTGACATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGAAATGCAAATGGCCATTAATACTTTAAAAATTTTTGACATCC  100

seq1  TTAGCCATCAAATAAATATAAATCAAAAGTATGTTCAGATTTTATTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCATCAAATAAATATAAATCAAAAGTATGTTCAGATTTTATTGTCT  150

seq1  TAGTCACAATGGCCAAGATCAAAGAAACAAATGACAATTTTGGTGAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACAATGGCCAAGATCAAAGAAACAAATGACAATTTTGGTGAGGAG  200

seq1  TGTGGGAAAAGGGAACACCTATTCACAGATCTTGTAGGAAAAATCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAAAGGGAACACCTATTCACAGATCTTGTAGGAAAAATCTGGAA  250

seq1  GCCACTGTAAAAACAAATGTGAATGTTCATCTGATATTTAGAAACATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTAAAAACAAATGTGAATGTTCATCTGATATTTAGAAACATGCA  300

seq1  TTCTAGATCAACTGATACCACTACTGGAATAATAAACAAAGGACTCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATCAACTGATACCACTACTGGAATAATAAACAAAGGACTCTTTA  350

seq1  TCCTACTACAATGATTTAATAATCTATGTTCATCTTGTGTTATCCAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTACAATGATTTAATAATCTATGTTCATCTTGTGTTATCCAAAAT  400

seq1  AGCCAGAAAATGAATACAATGAATTGTCCATTATTTCATGATTGGACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAAATGAATACAATGAATTGTCCATTATTTCATGATTGGACAAT  450

seq1  AAAAATATGGTACATTTAAATAATGAAATATGATTCTCCTGTAAAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGGTACATTTAAATAATGAAATATGATTCTCCTGTAAAAATAT  500

seq1  TTTTCAAATATATTGTTGTATTGTTCTCTGCTAAGGAGCTTTTAGAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATATATTGTTGTATTGTTCTCTGCTAAGGAGCTTTTAGAGTGT  550

seq1  ATTTACATCCACTTCAGGTCTTATCTATCTATTATTCTTATGGCAAATTA  600
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTACATCCACTTCAGGTCTTATCTATCTATTTTTCTTATGGCAAATTA  600

seq1  TAAAACATTTTCTCTGTTTTTAATCAATTTTATATTTCATTTTATATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATTTTCTCTGTTTTTAATCAATTTTATATTTCATTTTATATGTA  650

seq1  TAAATAGTTTGCCTACATG-TTTGTCTGTGTACAGCATGGATTCACTGCC  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAATAGTTTGCCTACATGTTTTGTCTGTGTACAGCATGGATTCACTGCC  700

seq1  TATTGATGTTAGAAGAGGGTATCAGATCCCCTAGAACTGG-AGATATAGA  748
      ||||||||||||||||||||||||||| |||| ||||||| |||||||||
seq2  TATTGATGTTAGAAGAGGGTATCAGAT-CCCTTGAACTGGAAGATATAGA  749

seq1  TAGTTGTAAGGCAGTA-TGTGAGTAATGGCAATGATACCTCTATCCTCAG  797
      ||||||||| |||||| ||||||| ||||||||||||| |||||||||||
seq2  TAGTTGTAA-GCAGTATTGTGAGT-ATGGCAATGATACTTCTATCCTCAG  797

seq1  GAAGAGTAGCCAA-TGCTCTTAAGCACTGAGCCATCTCTCCAGCCCACAA  846
      ||||||||  ||| |||||||||||||||||||||||||||   ||||||
seq2  GAAGAGTATACAATTGCTCTTAAGCACTGAGCCATCTCTCC--GCCACAA  845

seq1  TTTAATTATTCGTGATAACTGCTTTTTTTTGCTTTTCAAAATAATTATAC  896
       |||||||||||||| |||||| |||||| ||  ||||    |||  |||
seq2  -TTAATTATTCGTGAAAACTGC-TTTTTTGGC--TTCA----AATATTAC  887

seq1  AATTATAGTATTTTTTAAATTTTTAATGATTTAGGTTTTTTTT  939
       | || ||   ||||||||||||  | || |||||||||||||
seq2  CA-TAAAG--ATTTTTAAATTTT--AAGA-TTAGGTTTTTTTT  924