BAC Information

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BAC

Clone NameB6Ng01-055N19
Chromosome1 (Build37)
Map Location 126,674,493 - 126,675,591
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055N19.bB6Ng01-055N19.g
ACCDH878195DH878196
length5451,094
definitionDH878195|Mus musculus domesticus DNA, BAC clone: B6Ng01-055N19, 5' end.DH878196|Mus musculus domesticus DNA, BAC clone: B6Ng01-055N19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agttttatatggatctatttggacttttcttcctgcagccaaccagtttg
actagcacaattcactgaaaatgttgtcgtttttccaatgtgtattcctc
tccctctccttcttcctctctccttctccctctcccctctcccctcttct
ccgctctcctcccctctcctcccctctccacccctctcctcccctctcct
cccctctcctcccctctcctcgcctctcctcccctctcctcccctctcct
cccctctcctcccctctcccttctctcccctccctccttccctccctccc
tcgctccctcgctcccttgctccctcactccttccctccctccctccctc
cctccctcccatctttctgtctgtcagtcataaaaaatacggggtctgtc
tgtatatggatttatgactgtgccttcaaattatttcatggaacaatggg
atctgtttcatgccagaacaaagctgttcgctcaaattgaaatcaggaat
agaaagatctcccgtagtcctgatcattccagattttttttaatc

gaattctaatgcaggctctactgctctgaggggtccctgcttaacagtct
gtgtggagaaggtattttggttgtagggtgtgcctgagtttctccaaatc
acctccatgggagcaaaaggagagccgtccgttggtgttttacttaatat
tgtcaacatgaatgtagaattgcctaggagacaagctaggggtgtctatg
agggagttcctacactggatagagaggtagggaaacctgacctgaatgtg
tatagcactgttctgtgggcttgagttctggactaagtaggaaggccagg
ggtgggggtgagcaccagcatttatctctgcttcctgactgcagatgcta
tgtcctcagctacctgacacatctcctgccattcctctcacttcatgatg
atctaggctctccaactatgagccacaatgaaccttaaatttccttgctc
aggtaccttgttatggccacaagaagatagcttatataattgttattctt
attttagtagaaataactcaaaatgttgcttatttaactcattgctctta
ttagaatagtgacatcttgcctctaactcacccatggcttctttgtgatt
tttctaaagaatccacatagctaaacctgaatacattcttttttaattta
acaaaataaaactgtttctgcacagttaatttgtacctctacacactgtt
gcttgtacctctctgtatgtagtaagaactatattcatgaactctccatg
ttgagattgagtaacaaccaagttgaatgtttgaaaatgctttgcaagga
ctctcttgaatatagactatgcatgtgcatgtacatatacacacacaggc
acacactctaaaatgatttcatccagaggtttcctaggatatgctctcat
ccctccccaacccctaaataagccataccattactttaatgagatttgac
cagatggaaagacacctttctttatcagttattcccactatgcttaggat
gaattgttcttctgaataaatttatcatatgacacttgagatacagttcc
atgagcagagaagtacaaatgaaaatttgaaattcctctaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126674493_126675591
seq2: B6Ng01-055N19.g_67_1160

seq1  GAATTCTAATGCAGGCTCTACTGCTCTGAGGGGTCCCTGCTTAACAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGCAGGCTCTACTGCTCTGAGGGGTCCCTGCTTAACAGTCT  50

seq1  GTGTGGAGAAGGTATTTTGGTTGTAGGGTGTGCCTGAGTTTCTCCAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGAAGGTATTTTGGTTGTAGGGTGTGCCTGAGTTTCTCCAAATC  100

seq1  ACCTCCATGGGAGCAAAAGGAGAGCCGTCCGTTGGTGTTTTACTTAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATGGGAGCAAAAGGAGAGCCGTCCGTTGGTGTTTTACTTAATAT  150

seq1  TGTCAACATGAATGTAGAATTGCCTAGGAGACAAGCTAGGGGTGTCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACATGAATGTAGAATTGCCTAGGAGACAAGCTAGGGGTGTCTATG  200

seq1  AGGGAGTTCCTACACTGGATAGAGAGGTAGGGAAACCTGACCTGAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTCCTACACTGGATAGAGAGGTAGGGAAACCTGACCTGAATGTG  250

seq1  TATAGCACTGTTCTGTGGGCTTGAGTTCTGGACTAAGTAGGAAGGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCACTGTTCTGTGGGCTTGAGTTCTGGACTAAGTAGGAAGGCCAGG  300

seq1  GGTGGGGGTGAGCACCAGCATTTATCTCTGCTTCCTGACTGCAGATGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGGTGAGCACCAGCATTTATCTCTGCTTCCTGACTGCAGATGCTA  350

seq1  TGTCCTCAGCTACCTGACACATCTCCTGCCATTCCTCTCACTTCATGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCAGCTACCTGACACATCTCCTGCCATTCCTCTCACTTCATGATG  400

seq1  ATCTAGGCTCTCCAACTATGAGCCACAATGAACCTTAAATTTCCTTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGCTCTCCAACTATGAGCCACAATGAACCTTAAATTTCCTTGCTC  450

seq1  AGGTACCTTGTTATGGCCACAAGAAGATAGCTTATATAATTGTTATTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTTGTTATGGCCACAAGAAGATAGCTTATATAATTGTTATTCTT  500

seq1  ATTTTAGTAGAAATAACTCAAAATGTTGCTTATTTAACTCATTGCTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTAGAAATAACTCAAAATGTTGCTTATTTAACTCATTGCTCTTA  550

seq1  TTAGAATAGTGACATCTTGCCTCTAACTCACCCATGGCTTCTTTGTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATAGTGACATCTTGCCTCTAACTCACCCATGGCTTCTTTGTGATT  600

seq1  TTTCTAAAGAATCCACATAGCTAAACCTGAATACATTCTTTTTTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAGAATCCACATAGCTAAACCTGAATACATTCTTTTTTAATTTA  650

seq1  ACAAAATAAAACTGTTTCTGCACAGTTAATTTGTACCTCTACACACTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAAAACTGTTTCTGCACAGTTAATTTGTACCTCTACACACTGTT  700

seq1  GCTTGTACCTCTCTGTATGTAGTAAGAACTATATTCATGAACTCTCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACCTCTCTGTATGTAGTAAGAACTATATTCATGAACTCTCCATG  750

seq1  TTGAGATTGAGTAACAACCAAGTTGAATGTTTGAAAATGC-TTGCAAGGA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAGATTGAGTAACAACCAAGTTGAATGTTTGAAAATGCTTTGCAAGGA  800

seq1  CTCTCTTGAATATAGACTATGCATGTGCATGTACATATACACACACAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGAATATAGACTATGCATGTGCATGTACATATACACACACAGGC  850

seq1  ACACACTCTAAAATGAATTCATCCAGAGGTTTCCTAGGATATTGCTCTCA  899
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  ACACACTCTAAAATGATTTCATCCAGAGGTTTCCTAGGATA-TGCTCTCA  899

seq1  TCCCTCCCCCAACCCCTAAAATAAGCCATACCATTACTTTAATGAGATTT  949
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCCT-CCCCAACCCCT-AAATAAGCCATACCATTACTTTAATGAGATTT  947

seq1  GACCAGATGGAAAGACACC-TTCTTTATCAGTTATTTCCCACTATGCTTA  998
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  GACCAGATGGAAAGACACCTTTCTTTATCAGTTA-TTCCCACTATGCTTA  996

seq1  GGAATGAATATGTTCTTCTGAGTAATATTTTATCATATGACACTTGAGAT  1048
      || |||||| ||||||||||| ||  | ||||||||||||||||||||||
seq2  GG-ATGAAT-TGTTCTTCTGAATA--AATTTATCATATGACACTTGAGAT  1042

seq1  ACAGTTCCATGAGCATGAGAGTTACAAAATGAAA--TTGAAA-TGCTCTA  1095
      ||||||||||||||| ||||  ||| ||||||||  |||||| | |||||
seq2  ACAGTTCCATGAGCA-GAGAAGTAC-AAATGAAAATTTGAAATTCCTCTA  1090

seq1  ACAC  1099
      ||||
seq2  ACAC  1094


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