BAC Information

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BAC

Clone NameB6Ng01-056I11
Chromosome1 (Build37)
Map Location 11,130,051 - 11,216,114
singlet/doubletdoublet
Overlap genenone
Upstream geneArfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik, LOC665262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056I11.bB6Ng01-056I11.g
ACCDH878660DH878661
length7631,064
definitionDH878660|Mus musculus domesticus DNA, BAC clone: B6Ng01-056I11, 5' end.DH878661|Mus musculus domesticus DNA, BAC clone: B6Ng01-056I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,215,352 - 11,216,114)(11,130,051 - 11,131,121)
sequence
gaattcctccctgtttgaagttggttttcaagaggtggctgctcatgttc
cagagtgcaacctcaccaggatatgagtgccatcacctggaggtcctgct
ccactccattgttccaaggtttgggaccatgacttacccatgtgccttca
gcttgacaagggggtgaaataatcaggcagatattgttacatgattaaca
tgcttgcatacagagacaagcaggtgacctgaggggaggggtgccagaaa
gggatgaaggcagagatgctggacttttatcatgcctctgttgccttgtg
aacctaagaaagaagctaatgctctttttaaaaggcagctactaagtagc
tgctattataagaatcaaatcactagttcatttaaatgcgtctacaaaag
gaagtaaaaacgaccccagggctgttaactgaatgaaaaataagaaatag
aaaggaaaaacaggaccgtccctaggtaggtataagagagacgaggcaga
ggcagggacatctaggagagtccagaatgggcatgaccctgagccctgtg
aggaggtggaggggggctgggcagggtaaggaaaggagccatagaccaaa
gcaggcagcttgggccaagagactgaccaagagactggcatagctaagat
ggccaacttcaatagggatcagaggagttgggttactgaaacccagcctt
atacctgggctggagagttcaggggagagcaaggggtatggcagcccggg
gggtggggggggt
gaattcaaagatgagcctctacttttccgcttttttgctgatgaggaaat
ggaaggatcaaatatgaagcataggcttatgaaacatgacttgaaggttg
tggagaatgtcatagctaagtcactgttggtaagctgctgccaccttctg
tttccttctgggcagtgattagcacaagaacacagtaacatgttgatgct
ttccatgtatttcagtgtaaagacctcctcattctttatcagtaacgtta
gtattttacatttcagattaaatccaacgaaggcagctatggctttggcc
tagaagacaaaaacaaagttccaataataaaattagtggaaaaggggtcg
aatgccgaggtaatataaaaaaaaatattcgcatttttgttgaagtttgt
catgcaatacagtgccaaagtgaaatcaacagctatgtttattgaagatg
ctgtctctgaataatcatgtactgaggttcttttatagtattgggtttgt
acctctgggactgtgtcttagtgatgactgagaatgggaagtgctgatat
tccagagatctatagctctgaattgaagagtccccaagtgatgtgttttg
tgtccccagtattgtcccaatcattgattctattctagaattttttggaa
ggtgcatagggtgtgacagttgtcctaagtctaccagatggctcttctat
tcaaccaaaggaaatattttttatcttctgcttctgttgtcttttctaag
aatgtaatttccatcataaaagcaaatactttgactttttcttaaatcag
ttgacatcttctcacatcactaggtttttaaagagtggactcttatgatt
gttgttgccttcattgagaatattatttgatagcagttatatattagcat
tttagattctaggattctagacattagaaacagatgacgttccttgttct
gagctggaaactttgatgttttttcctgatattcacaagaacttggtttg
ataaactaaacccgtgtttttgcttgaagtagggtgtgtcgctgtgattc
cacgtcttgggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11215352_11216114
seq2: B6Ng01-056I11.b_50_812 (reverse)

seq1  ACCCCCCCCACCCCCCGGGCTGCCATACCCCTTGCTCTCCCCTGAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCCCACCCCCCGGGCTGCCATACCCCTTGCTCTCCCCTGAACTCT  50

seq1  CCAGCCCAGGTATAAGGCTGGGTTTCAGTAACCCAACTCCTCTGATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGGTATAAGGCTGGGTTTCAGTAACCCAACTCCTCTGATCCCT  100

seq1  ATTGAAGTTGGCCATCTTAGCTATGCCAGTCTCTTGGTCAGTCTCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTTGGCCATCTTAGCTATGCCAGTCTCTTGGTCAGTCTCTTGGC  150

seq1  CCAAGCTGCCTGCTTTGGTCTATGGCTCCTTTCCTTACCCTGCCCAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGCCTGCTTTGGTCTATGGCTCCTTTCCTTACCCTGCCCAGCCC  200

seq1  CCCTCCACCTCCTCACAGGGCTCAGGGTCATGCCCATTCTGGACTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACCTCCTCACAGGGCTCAGGGTCATGCCCATTCTGGACTCTCCT  250

seq1  AGATGTCCCTGCCTCTGCCTCGTCTCTCTTATACCTACCTAGGGACGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCCCTGCCTCTGCCTCGTCTCTCTTATACCTACCTAGGGACGGTC  300

seq1  CTGTTTTTCCTTTCTATTTCTTATTTTTCATTCAGTTAACAGCCCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTCCTTTCTATTTCTTATTTTTCATTCAGTTAACAGCCCTGGGG  350

seq1  TCGTTTTTACTTCCTTTTGTAGACGCATTTAAATGAACTAGTGATTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTTACTTCCTTTTGTAGACGCATTTAAATGAACTAGTGATTTGAT  400

seq1  TCTTATAATAGCAGCTACTTAGTAGCTGCCTTTTAAAAAGAGCATTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATAGCAGCTACTTAGTAGCTGCCTTTTAAAAAGAGCATTAGCT  450

seq1  TCTTTCTTAGGTTCACAAGGCAACAGAGGCATGATAAAAGTCCAGCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTAGGTTCACAAGGCAACAGAGGCATGATAAAAGTCCAGCATCT  500

seq1  CTGCCTTCATCCCTTTCTGGCACCCCTCCCCTCAGGTCACCTGCTTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCATCCCTTTCTGGCACCCCTCCCCTCAGGTCACCTGCTTGTCT  550

seq1  CTGTATGCAAGCATGTTAATCATGTAACAATATCTGCCTGATTATTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGCAAGCATGTTAATCATGTAACAATATCTGCCTGATTATTTCAC  600

seq1  CCCCTTGTCAAGCTGAAGGCACATGGGTAAGTCATGGTCCCAAACCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGTCAAGCTGAAGGCACATGGGTAAGTCATGGTCCCAAACCTTGG  650

seq1  AACAATGGAGTGGAGCAGGACCTCCAGGTGATGGCACTCATATCCTGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGAGTGGAGCAGGACCTCCAGGTGATGGCACTCATATCCTGGTG  700

seq1  AGGTTGCACTCTGGAACATGAGCAGCCACCTCTTGAAAACCAACTTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCACTCTGGAACATGAGCAGCCACCTCTTGAAAACCAACTTCAAA  750

seq1  CAGGGAGGAATTC  763
      |||||||||||||
seq2  CAGGGAGGAATTC  763

seq1: chr1_11130051_11131121
seq2: B6Ng01-056I11.g_68_1131

seq1  GAATTCAAAGATGAGCCTCTACTTTTCCGCTTTTTTGCTGATGAGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATGAGCCTCTACTTTTCCGCTTTTTTGCTGATGAGGAAAT  50

seq1  GGAAGGATCAAATATGAAGCATAGGCTTATGAAACATGACTTGAAGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGATCAAATATGAAGCATAGGCTTATGAAACATGACTTGAAGGTTG  100

seq1  TGGAGAATGTCATAGCTAAGTCACTGTTGGTAAGCTGCTGCCACCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATGTCATAGCTAAGTCACTGTTGGTAAGCTGCTGCCACCTTCTG  150

seq1  TTTCCTTCTGGGCAGTGATTAGCACAAGAACACAGTAACATGTTGATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTGGGCAGTGATTAGCACAAGAACACAGTAACATGTTGATGCT  200

seq1  TTCCATGTATTTCAGTGTAAAGACCTCCTCATTCTTTATCAGTAACGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTATTTCAGTGTAAAGACCTCCTCATTCTTTATCAGTAACGTTA  250

seq1  GTATTTTACATTTCAGATTAAATCCAACGAAGGCAGCTATGGCTTTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTACATTTCAGATTAAATCCAACGAAGGCAGCTATGGCTTTGGCC  300

seq1  TAGAAGACAAAAACAAAGTTCCAATAATAAAATTAGTGGAAAAGGGGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACAAAAACAAAGTTCCAATAATAAAATTAGTGGAAAAGGGGTCG  350

seq1  AATGCCGAGGTAATATAAAAAAAAATATTCGCATTTTTGTTGAAGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCGAGGTAATATAAAAAAAAATATTCGCATTTTTGTTGAAGTTTGT  400

seq1  CATGCAATACAGTGCCAAAGTGAAATCAACAGCTATGTTTATTGAAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATACAGTGCCAAAGTGAAATCAACAGCTATGTTTATTGAAGATG  450

seq1  CTGTCTCTGAATAATCATGTACTGAGGTTCTTTTATAGTATTGGGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGAATAATCATGTACTGAGGTTCTTTTATAGTATTGGGTTTGT  500

seq1  ACCTCTGGGACTGTGTCTTAGTGATGACTGAGAATGGGAAGTGCTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGGGACTGTGTCTTAGTGATGACTGAGAATGGGAAGTGCTGATAT  550

seq1  TCCAGAGATCTATAGCTCTGAATTGAAGAGTCCCCAAGTGATGTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGATCTATAGCTCTGAATTGAAGAGTCCCCAAGTGATGTGTTTTG  600

seq1  TGTCCCCAGTATTGTCCCAATCATTGATTCTATTCTAGAATTTTTTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGTATTGTCCCAATCATTGATTCTATTCTAGAATTTTTTGGAA  650

seq1  GGTGCATAGGGTGTGACAGTTGTCCTAAGTCTACCAGATGGCTCTTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATAGGGTGTGACAGTTGTCCTAAGTCTACCAGATGGCTCTTCTAT  700

seq1  TCAACCAAAGGAAATATTTTTTATCTTCTGCTTCTGTTGTCTTTTCTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAAGGAAATATTTTTTATCTTCTGCTTCTGTTGTCTTTTCTAAG  750

seq1  AATGTAATTTCCATCATAAAAGCAAATACTTTGACTTTTTCATTAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGTAATTTCCATCATAAAAGCAAATACTTTGACTTTTTC-TTAAATCA  799

seq1  GTTGACATCTTCTCACATCACTAGGTTTTTAAAGAGTGGACTCTTATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATCTTCTCACATCACTAGGTTTTTAAAGAGTGGACTCTTATGAT  849

seq1  TGTTGTTGCCTTCATTGAGAAATATTCATTTGATAGCAGTTATATATTAG  900
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TGTTGTTGCCTTCATTGAG-AATATT-ATTTGATAGCAGTTATATATTAG  897

seq1  CATTTTAGATTCTAGGATTCTAGACATTTAGAAAGCAGATGACGTTCCCT  950
      |||||||||||||||||||||||||| ||||||| ||||||||||||| |
seq2  CATTTTAGATTCTAGGATTCTAGACA-TTAGAAA-CAGATGACGTTCCTT  945

seq1  GTTCTGAGCTGGAAACTTTGATG-TTTTTCCTGTATATACACGAGGAACT  999
      ||||||||||||||||||||||| ||||||||| |||| ||| | |||||
seq2  GTTCTGAGCTGGAAACTTTGATGTTTTTTCCTG-ATATTCAC-AAGAACT  993

seq1  GGGTTTGATAAACAAAACCCGTTGTTTTGTTTTGAATGTGGTGTGTGTGC  1049
       |||||||||||| ||||||| ||||||   ||||| || | ||||||  
seq2  TGGTTTGATAAACTAAACCCG-TGTTTTTGCTTGAA-GTAGGGTGTGTCG  1041

seq1  TTGTAATCCCATG-CTTGGGAGG  1071
       ||| || ||| | |||||||||
seq2  CTGTGATTCCACGTCTTGGGAGG  1064