BAC Information

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BAC

Clone NameB6Ng01-056J12
Chromosome1 (Build37)
Map Location 68,961,969 - 69,166,413
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056J12.bB6Ng01-056J12.g
ACCDH878706DH878707
length1,0601,078
definitionDH878706|Mus musculus domesticus DNA, BAC clone: B6Ng01-056J12, 5' end.DH878707|Mus musculus domesticus DNA, BAC clone: B6Ng01-056J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,961,969 - 68,963,034)(69,165,317 - 69,166,413)
sequence
gaattcctgcatactcccaaaatatttcacttcatatagtctccagtaca
gctgtttctacatcctacagggtcagatgacatgtataataaatttagga
atagggctaaactgaggtgagggagagctaggaataaggataccaccatg
tttggctgttaggacctagagtcttcctattgggtaaagttgtgagatac
atttcccatttaaacattcatgaataccaaggattagtccatcagtttcc
atagttagtatcttggggtgatgaaacacattcccaaatattttcttggt
aattttaaacatacaagaacatttagggaaaaatgttctaagagccccta
tttctcactgacctcctcattctacagacaaatgaaagtaattgtttggc
agcaggagtttattgtgttctaaggacaaattaaggggtcactttctctc
tttacaacatgtgaatcccagggatgaaactcaagatttcagcctttatc
cattcatccatctcaccagccaataaagcaatttttaactggagtatttt
cttattgaaagattgaagaaaaaatttacctactttctagaataaataag
attaagtttcttatattgagggtagaggtaggtggaaataagagatgcaa
tgaagataaaaggtaatgcttactgttccatacaggacacaagtcaatta
aattaaaggtgataaaattaaaggttgaagacagggaaaagaagcaccat
cttaggtttccagtctcgccaaccttcactagcatttgggctacattcct
attcacacacagatgcattgtaattgttggtcccataagacttctctatg
ttgtcataagctttcataaagtaattttgttgaagtgagtgaatttaaca
tcaacatatctgttggtggtggtgaccttgatggatgataatgatgatga
tgacgatgacaatatcagcttttgaatacaaattcctgagtaaaccaata
atacatggaagggactgcctttgaggtttataatgaaaatagaaaaatca
gcaatgcctc
gaattcttaataatataagtcacacacacacacacacacacacacacaca
cacacacacacacacaccccaaaaaggaacaattcacagtaaatcacagt
taaaacacaggaaaactattttgttgctattagtaaacactcttctgtct
agatgctctgaaacactgaacagagagattaataggtactgagtgctttc
tgcatgctaggcacttaaatattttccagtcaattgtttcacttaaaact
tagtgcaagactatgaagcagatgctattgatcttccgtttatatatgga
ggaacaaagcatagattgtgcaaggaagatcttgggtcacccagcttgta
aaaatcaaacctgggatctgaactagagagtccaggtgcagaacaggcat
ttcctgtgactgcatcactagatatttaccttgggataataagtttgttg
gacgcctaatgttatcctcagagaagcctgtgaacatattcagtctttgc
tcacaggatttattgggcttgccagtaagggagaggctgaggcaaaaata
taggcaggattctttattatgttactacaataccagtctggtcccagaca
taacctttctggattactcactactataagtcattagtacaggggcctct
ggagcacttttgtacaaagtgagtgctaagcacaagtaatgtagctattt
taaatcttttattttgccgacgtttaacagagaatgggtgttcagttcac
tgcaaggaaattttctagtatcataggctatagctaatggggtcagcaag
aggatacacagtagacccctgataggtaccctaaattgaagttttaagaa
atgttggggagattgtcttgctttattagttgtcagagcttattttcatg
acctagatttgatccaggttgctttggaaacagacatttgatttgttctt
ccgagcaatgtctttgcttatgtgcacacatgacagcaattagaattgtc
tcaggatgcggtgacactttaatcatgaaacaatatcggccctggatgcc
tgtgctaacagaagtcagaaacaagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68961969_68963034
seq2: B6Ng01-056J12.b_44_1103

seq1  GAATTCCTGCATACTCCCAAAATATTTCACTTCATATAGTCTCCAGTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCATACTCCCAAAATATTTCACTTCATATAGTCTCCAGTACA  50

seq1  GCTGTTTCTACATCCTACAGGGTCAGATGACATGTATAATAAATTTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCTACATCCTACAGGGTCAGATGACATGTATAATAAATTTAGGA  100

seq1  ATAGGGCTAAACTGAGGTGAGGGAGAGCTAGGAATAAGGATACCACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCTAAACTGAGGTGAGGGAGAGCTAGGAATAAGGATACCACCATG  150

seq1  TTTGGCTGTTAGGACCTAGAGTCTTCCTATTGGGTAAAGTTGTGAGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTGTTAGGACCTAGAGTCTTCCTATTGGGTAAAGTTGTGAGATAC  200

seq1  ATTTCCCATTTAAACATTCATGAATACCAAGGATTAGTCCATCAGTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCATTTAAACATTCATGAATACCAAGGATTAGTCCATCAGTTTCC  250

seq1  ATAGTTAGTATCTTGGGGTGATGAAACACATTCCCAAATATTTTCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAGTATCTTGGGGTGATGAAACACATTCCCAAATATTTTCTTGGT  300

seq1  AATTTTAAACATACAAGAACATTTAGGGAAAAATGTTCTAAGAGCCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAACATACAAGAACATTTAGGGAAAAATGTTCTAAGAGCCCCTA  350

seq1  TTTCTCACTGACCTCCTCATTCTACAGACAAATGAAAGTAATTGTTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTGACCTCCTCATTCTACAGACAAATGAAAGTAATTGTTTGGC  400

seq1  AGCAGGAGTTTATTGTGTTCTAAGGACAAATTAAGGGGTCACTTTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTTTATTGTGTTCTAAGGACAAATTAAGGGGTCACTTTCTCTC  450

seq1  TTTACAACATGTGAATCCCAGGGATGAAACTCAAGATTTCAGCCTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAACATGTGAATCCCAGGGATGAAACTCAAGATTTCAGCCTTTATC  500

seq1  CATTCATCCATCTCACCAGCCAATAAAGCAATTTTTAACTGGAGTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATCCATCTCACCAGCCAATAAAGCAATTTTTAACTGGAGTATTTT  550

seq1  CTTATTGAAAGATTGAAGAAAAAATTTACCTACTTTCTAGAATAAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGAAAGATTGAAGAAAAAATTTACCTACTTTCTAGAATAAATAAG  600

seq1  ATTAAGTTTCTTATATTGAGGGTAGAGGTAGGTGGAAATAAGAGATGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTTCTTATATTGAGGGTAGAGGTAGGTGGAAATAAGAGATGCAA  650

seq1  TGAAGATAAAAGGTAATGCTTACTGTTCCATACAGGACACAAGTCAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATAAAAGGTAATGCTTACTGTTCCATACAGGACACAAGTCAATTA  700

seq1  AATTAAAGGTGATAAAATTAAAGGTTGAAGACAGGGAAAAGAAGCACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGGTGATAAAATTAAAGGTTGAAGACAGGGAAAAGAAGCACCAT  750

seq1  CTTAGGTTTCCAGTCTCGCCAACCTTCACTAGCATTTGGGCTACATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTTCCAGTCTCGCCAACCTTCACTAGCATTTGGGCTACATTCCT  800

seq1  ATTCACACACAGATGCATTGTAATTGTTGGTCCCATAAGACTTCTCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACACAGATGCATTGTAATTGTTGGTCCCATAAGACTTCTCTATG  850

seq1  TTGTCATAAGCTTTCAATAAAGTAATTTTGTTGAAGTGAGTGATTTAAAC  900
      ||||||||||||||| ||||||||||||||||||||||||||| || |||
seq2  TTGTCATAAGCTTTC-ATAAAGTAATTTTGTTGAAGTGAGTGAATTTAAC  899

seq1  ATCAACATATTCTGTTGGTGGTGGTGACCTTGAT-GATGATAATGATGAT  949
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  ATCAACATA-TCTGTTGGTGGTGGTGACCTTGATGGATGATAATGATGAT  948

seq1  GATGACGATGACAATATCAGCTTTTGAATACAAACTCCCAGAGTAAAACA  999
      |||||||||||||||||||||||||||||||||| | || ||||||| ||
seq2  GATGACGATGACAATATCAGCTTTTGAATACAAA-TTCCTGAGTAAACCA  997

seq1  AATTAATACATGAAAGGACTTGCCTTTGAAGTTTTATAATGAAAATAGAA  1049
      |  ||||||||| ||||   |||||||| || ||||||||||||||||||
seq2  A--TAATACATGGAAGGGACTGCCTTTG-AGGTTTATAATGAAAATAGAA  1044

seq1  AAATCAGCAATAGCCTC  1066
      ||||||||||| |||||
seq2  AAATCAGCAAT-GCCTC  1060

seq1: chr1_69165317_69166413
seq2: B6Ng01-056J12.g_67_1144 (reverse)

seq1  ATTCTTGGTTTCCTGACTTCTGGTTGAGCAACAGTGGCATCCAGTGGCCA  50
      |||||||  || ||||||||||  | ||| |||  ||||||||| |||| 
seq2  ATTCTTG--TTTCTGACTTCTG--TTAGC-ACA--GGCATCCAG-GGCC-  41

seq1  GATAATTGTTTCATGATTAAAGTGTCACCGCAGTCCTGAGGACAAGTCTA  100
      ||| |||||||||||||||||||||||||||| |||||| ||||| ||||
seq2  GAT-ATTGTTTCATGATTAAAGTGTCACCGCA-TCCTGA-GACAATTCTA  88

seq1  AATGCTGGTCATGTGTGCAACCTAAGCAAAGACATTTGCTCGGAAGAACA  150
      | |||| ||||||||||| || |||||||||||| |||||||||||||||
seq2  ATTGCT-GTCATGTGTGC-ACATAAGCAAAGACA-TTGCTCGGAAGAACA  135

seq1  AATCAAATGTCTGTTTCCAAAGCAACCCTGGATCAAATCTAGGTCATGAA  200
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCAAATGTCTGTTTCCAAAGCAA-CCTGGATCAAATCTAGGTCATGAA  184

seq1  AATTTAGCTCTGACAACTAATAAATGCAGACAATCTCCCCAACATTTCTT  250
      || | |||||||||||||||||||   |||||||||||||||||||||||
seq2  AA-TAAGCTCTGACAACTAATAAAGCAAGACAATCTCCCCAACATTTCTT  233

seq1  AACAACTTCAATTTAGGGTACCTATCAGGGGTCTACTGTGTATCCTCTTG  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-AACTTCAATTTAGGGTACCTATCAGGGGTCTACTGTGTATCCTCTTG  282

seq1  CTGACCCCATTAGCTATAGCCTATGATACTAGAAAATTTCCTTTGCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGACCCCATTAGCTATAGCCTATGATACTAGAAAATTTCC-TTGCAGTG  331

seq1  AACTGAACACCCATTCTCTGTTAAACGTCGGCAAAATAAAAGATTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACACCCATTCTCTGTTAAACGTCGGCAAAATAAAAGATTTAAAA  381

seq1  TAGCTACATTACTTGTGCTTAGCACTCACTTTGTACAAAAGTGCTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACATTACTTGTGCTTAGCACTCACTTTGTACAAAAGTGCTCCAGA  431

seq1  GGCCCCTGTACTAATGACTTATAGTAGTGAGTAATCCAGAAAGGTTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTGTACTAATGACTTATAGTAGTGAGTAATCCAGAAAGGTTATGT  481

seq1  CTGGGACCAGACTGGTATTGTAGTAACATAATAAAGAATCCTGCCTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACCAGACTGGTATTGTAGTAACATAATAAAGAATCCTGCCTATAT  531

seq1  TTTTGCCTCAGCCTCTCCCTTACTGGCAAGCCCAATAAATCCTGTGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTCAGCCTCTCCCTTACTGGCAAGCCCAATAAATCCTGTGAGCA  581

seq1  AAGACTGAATATGTTCACAGGCTTCTCTGAGGATAACATTAGGCGTCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAATATGTTCACAGGCTTCTCTGAGGATAACATTAGGCGTCCAA  631

seq1  CAAACTTATTATCCCAAGGTAAATATCTAGTGATGCAGTCACAGGAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTATTATCCCAAGGTAAATATCTAGTGATGCAGTCACAGGAAATG  681

seq1  CCTGTTCTGCACCTGGACTCTCTAGTTCAGATCCCAGGTTTGATTTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTGCACCTGGACTCTCTAGTTCAGATCCCAGGTTTGATTTTTAC  731

seq1  AAGCTGGGTGACCCAAGATCTTCCTTGCACAATCTATGCTTTGTTCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGTGACCCAAGATCTTCCTTGCACAATCTATGCTTTGTTCCTCC  781

seq1  ATATATAAACGGAAGATCAATAGCATCTGCTTCATAGTCTTGCACTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAACGGAAGATCAATAGCATCTGCTTCATAGTCTTGCACTAAGT  831

seq1  TTTAAGTGAAACAATTGACTGGAAAATATTTAAGTGCCTAGCATGCAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGAAACAATTGACTGGAAAATATTTAAGTGCCTAGCATGCAGAA  881

seq1  AGCACTCAGTACCTATTAATCTCTCTGTTCAGTGTTTCAGAGCATCTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAGTACCTATTAATCTCTCTGTTCAGTGTTTCAGAGCATCTAGA  931

seq1  CAGAAGAGTGTTTACTAATAGCAACAAAATAGTTTTCCTGTGTTTTAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGTGTTTACTAATAGCAACAAAATAGTTTTCCTGTGTTTTAACT  981

seq1  GTGATTTACTGTGAATTGTTCCTTTTTGGGGTGTGTGTGTGTGTGTGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTACTGTGAATTGTTCCTTTTTGGGGTGTGTGTGTGTGTGTGTGT  1031

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGACTTATATTATTAAGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGACTTATATTATTAAGAATTC  1078