BAC Information

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BAC

Clone NameB6Ng01-056O09
Chromosome1 (Build37)
Map Location 80,847,636 - 80,848,703
singlet/doubletsinglet
Overlap genenone
Upstream geneSerpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10
Downstream geneLOC665092, 9430031J16Rik, EG621020, LOC433328, EG665145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056O09.bB6Ng01-056O09.g
ACCDH878920DH878921
length1,1861,067
definitionDH878920|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O09, 5' end.DH878921|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgtttgttcagttctgagccccatttttaagggggttatttgattt
tctgaggtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccagtctgttggtggtctt
tttgtcttatagacagtgtcttttgccttgcagaaactttggagtttcat
tagatcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgtccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttggctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ccacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccaaacaa
atttgcaaattgctccttccaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttggtcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttatttctttcttcaaggacttgaagtttttatcataca
gatctttcacttccttcgttagagtcacgccgagatattttatattattt
gtggctatgagaaggtgtggttccctaatttctttctcagcctgttattc
tttggtgtagagaaaggccatgacttgtttgagttaatttataatccagc
tactttcacgagctgtttatcaggttaggaggtccttgttgaaatttaag
gtcatttaattaactatacctttatctgcaaaaggagatattggactctc
tctatccaattggatcccctggagtccctgtttggc
gaattcaacatttactgagataatttgctattgttggttggatttttgta
aacataaaatatatttatttaaaatcaaatattgcaaaattaatttcttt
cttattatctttcagtctgcctatgtctcctccattgacttctccttttg
gtatttgtaaattggcaaaactaattacttggtcattttttgccagatcc
tctttactctgaacccatctttctactttcctcacaagtaagtgggttac
attccaaggatgttgtaacttcctatagaatgagaaaacaaaacttacag
tgtaaaatgtgcatggaaagctatacagaaaatactaaataatttcaaga
tgatctcagtatataaatgaatatgtctgagaatttactcctacattgca
ttcaaggcccagcattaaacatcaaaagaacagatggtttcttaagtctc
aacatgaaggactgaaacctactttgcctagcttaaaagtgtccctatgt
tttctgtgtattgctttgaatatatgacttcattaacacataaaaactga
ggatttgactcagaactcaacacccctcatgttataggaatgagaagata
gagaaatactgtaaaaattgagaatggtggtggatgccctttgacattgg
agagttggaaaatacagtcctggatgcaaagatgggacctgagggaagtg
cttgatttgaattggaatccaggacacctggaggcagtacaaggatggtg
agctgaagtcagaatatgttatccatggcacacagagtttccccttttct
ctcttataccttttgagacaagacaaattttagactatagggtattcaat
tatctaaatccctccgtttgtcctcactaggagagtatgggagccatatg
attagtttatttagagacatgtggacatgtagagtatgtcttttggttac
acactccatacacttatttaattactacagtgtaagtttgagtagtgagg
ctgttgaagagccagagtctggaaagtcattttcagccagagatgctctt
ttcttaggaacactcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80847636_80848703
seq2: B6Ng01-056O09.g_71_1137

seq1  GAATTCAACATTTACTGAGATAATTTGCTATTGTTGGTTGGATTTTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATTTACTGAGATAATTTGCTATTGTTGGTTGGATTTTTGTA  50

seq1  AACATAAAATATATTTATTTAAAATCAAATATTGCAAAATTAATTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAATATATTTATTTAAAATCAAATATTGCAAAATTAATTTCTTT  100

seq1  CTTATTATCTTTCAGTCTGCCTATGTCTCCTCCATTGACTTCTCCTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATCTTTCAGTCTGCCTATGTCTCCTCCATTGACTTCTCCTTTTG  150

seq1  GTATTTGTAAATTGGCAAAACTAATTACTTGGTCATTTTTTGCCAGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTAAATTGGCAAAACTAATTACTTGGTCATTTTTTGCCAGATCC  200

seq1  TCTTTACTCTGAACCCATCTTTCTACTTTCCTCACAAGTAAGTGGGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTCTGAACCCATCTTTCTACTTTCCTCACAAGTAAGTGGGTTAC  250

seq1  ATTCCAAGGATGTTGTAACTTCCTATAGAATGAGAAAACAAAACTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAGGATGTTGTAACTTCCTATAGAATGAGAAAACAAAACTTACAG  300

seq1  TGTAAAATGTGCATGGAAAGCTATACAGAAAATACTAAATAATTTCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATGTGCATGGAAAGCTATACAGAAAATACTAAATAATTTCAAGA  350

seq1  TGATCTCAGTATATAAATGAATATGTCTGAGAATTTACTCCTACATTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCAGTATATAAATGAATATGTCTGAGAATTTACTCCTACATTGCA  400

seq1  TTCAAGGCCCAGCATTAAACATCAAAAGAACAGATGGTTTCTTAAGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCCCAGCATTAAACATCAAAAGAACAGATGGTTTCTTAAGTCTC  450

seq1  AACATGAAGGACTGAAACCTACTTTGCCTAGCTTAAAAGTGTCCCTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAGGACTGAAACCTACTTTGCCTAGCTTAAAAGTGTCCCTATGT  500

seq1  TTTCTGTGTATTGCTTTGAATATATGACTTCATTAACACATAAAAACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTATTGCTTTGAATATATGACTTCATTAACACATAAAAACTGA  550

seq1  GGATTTGACTCAGAACTCAACACCCCTCATGTTATAGGAATGAGAAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGACTCAGAACTCAACACCCCTCATGTTATAGGAATGAGAAGATA  600

seq1  GAGAAATACTGTAAAAATTGAGAATGGTGGTGGATGCCC-TTGACATTGG  649
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGAAATACTGTAAAAATTGAGAATGGTGGTGGATGCCCTTTGACATTGG  650

seq1  AGAGTTGGAAAATACAGTCCTGGATGC-AAGATGGGACCTGAGGGAAGTG  698
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAGTTGGAAAATACAGTCCTGGATGCAAAGATGGGACCTGAGGGAAGTG  700

seq1  CTTGATTTGAATTGGAATCCAGGACACCTGGAGGCAGTACAAGGATGGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTGAATTGGAATCCAGGACACCTGGAGGCAGTACAAGGATGGTG  750

seq1  AGCTGAAGTCAGAATATGTTATCCATGGCACACAGAGTTTCCCC-TTTCT  797
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGCTGAAGTCAGAATATGTTATCCATGGCACACAGAGTTTCCCCTTTTCT  800

seq1  CTCTTATAACCTTTGAGACAAGACAAATTTTAGACTATA-GGTATTCAAT  846
      |||||||| | |||||||||||||||||||||||||||| ||||||||||
seq2  CTCTTATACCTTTTGAGACAAGACAAATTTTAGACTATAGGGTATTCAAT  850

seq1  TATCTAAATCCCTCCGTTTTGTCCTCACTAGGAGAGTATGGGAGCCATAT  896
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATCTAAATCCCTCCG-TTTGTCCTCACTAGGAGAGTATGGGAGCCATAT  899

seq1  GATTAGTTTATTTAGAGACATGTGGACATGTAGAGATATGTCTTTTGGTT  946
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GATTAGTTTATTTAGAGACATGTGGACATGTAGAG-TATGTCTTTTGGTT  948

seq1  AACACAACTCCATAACACTTATTTAATTACTACAGTGTTAAGTTTGAGTA  996
       |||| ||||||| ||||||||||||||||||||||| ||||||||||||
seq2  -ACAC-ACTCCAT-ACACTTATTTAATTACTACAGTG-TAAGTTTGAGTA  994

seq1  GTGAGGCTGTTGAAGAGCCAGAGTCTGAAAGGTCATTTTCAAGCAGAGAT  1046
      ||||||||||||||||||||||||||| || ||||||||||  |||||||
seq2  GTGAGGCTGTTGAAGAGCCAGAGTCTGGAAAGTCATTTTCAGCCAGAGAT  1044

seq1  GCTCTTTTCTTAGGAA-ACTCCT  1068
      |||||||||||||||| ||||||
seq2  GCTCTTTTCTTAGGAACACTCCT  1067