BAC Information

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BAC

Clone NameB6Ng01-056P10
Chromosome1 (Build37)
Map Location 186,426,793 - 186,427,937
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056P10.bB6Ng01-056P10.g
ACCDH878969DH878970
length1,1241,177
definitionDH878969|Mus musculus domesticus DNA, BAC clone: B6Ng01-056P10, 5' end.DH878970|Mus musculus domesticus DNA, BAC clone: B6Ng01-056P10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgtatttcgtaccaggctattaacttatagtcattataata
agacctacctgtgactgggtaataagaataaaaccagggctaagagatgg
ctcagcgggtaagagcattgactgctcttctgaaggtccagagttcaaat
cccagcaaccacaatgatggctcacaaccatccataatgagatatgatgc
cctcttctggtgtgtctaaagacaaatacagtgtactaacatataataat
aagtaaatctttttttttttaaaaaagaacaaaaccagaaagttggtgtt
taaatttttctttgactaataaagcatgttttagatcacttattttgccc
agtggttgagtaattaaaatgttattaagaagctgactgagacaccaaac
aactgaatagtcaatatgctttggcaatttcattttattttagttataaa
attagctcaataaaaaattgacaatgtgtcataaaagggaaataaatttc
ttgaatgtttttttttaatttatatttaccaggttcccatttctcctcta
tagttacaaagattccgtcttcttccattccagatgttaataaggccagg
atccaaaggctagcctacacacagggttagggagacggctcagagagcta
agtatttgctgcacaagcatgaagacctggactttgctctccagcaccca
tgtcaaaatccaggcatcgtggcacacatctgtaacccagagattggggg
tcagagacaggtgaatcctagggccgaactataaatctgctttgcctcaa
cagacgcacctagggtcagtgagagatcctgtttcaaaaaatgctgtgga
ggctgggagagggaaacacctgacgtcaacctctgtcttctacatgttca
tataacaggcaagcacaactaaccatacatgtgcacgtgtgtgcatacac
atgagtgtgcacacacacacgtgcatgcgcatgcacacacacacacacac
atcagtataacccccaaaggctattttttaatgaactacgattattacat
cagcagtactaaaaacaaactaagtgccttcaggctggttgattctcctt
catgatttgctgaaacattttttt
gaattcaaaccagccaacagcaaaagtaagaaatctaatgtgtaagaagg
ggcgagttatctgagcgggcattttttgacagagacaaggaaacatgcaa
ggaggtggaaatgtgcagcgtccctaatcatcagggaaacgtgaatgtaa
atcgcagcccgatgccattggctgctcagttagagtggctgctaacaaga
gatgaagggacagctcgtgcagatgagggtgtggaggacaagaaactgat
atactcttggtgggggtgtaaatcagtatcgctattatggtaaacagcat
agaagttactcaaagcatcaaaaccctaccacatgatccagcaagtctat
ttctgggcatacatttaatatagatggaaactgtatcgaagagacaccta
cactacctggtttatgtctccatcagtggatgaacacataaaagagagca
tgcacatggaatattattcagccataaaaaatgagatcttggttcttgtt
gttgttgttttaatgacaaacacgtgagcctggaagacattatctcttaa
tcaatgggccaggaacacaaaggaaataccgtgtgatttgatcatgtata
gaagataaatatagtgccctgatgtcacgcccgctctcgaccagcaagaa
cgacgtgaccaccagtccttctaacagcagtttattcagtcctgattctt
cttgtttatatctcccccgaaccctgggcctctcactccttttatactct
ctctcatccacgcaccgcaggccacgccccctcgccagtcgagaggcttc
agctaatcagggcagcaggggcaaatctccaccaaattggattcacctgt
atcctggtacacctgcccagcactcaagatgttgtgtcttatatgaggaa
gtcagtgcaagtcatatgacttagctgcagtccctggcgcctttgggact
gccgccacacccgctcccacaccctgataggatagagcataaagattggc
gagagtagagtgagaagagtgggtagaagagattgtttataagtactaaa
acagataaataaagcatgtaggtattccactccgaggagggtacttatca
gtaatagcattttaaccaacgaggcctttacctgaaaatgtgagacggtt
gtgttgaggttgttagtggagaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186426793_186427937
seq2: B6Ng01-056P10.b_43_1166 (reverse)

seq1  AAAAAAATTGTCTCCAGCAAATACATGAAGGAGAAATTCCACCCCAGCCT  50
       |||||| ||| | |||||||| ||||||||||||  || |  |||||||
seq2  -AAAAAAATGT-TTCAGCAAAT-CATGAAGGAGAA--TCAA--CCAGCCT  43

seq1  GAAGGCCAACTTAAGTTTTGTTTTTTAAGTTACTGGCTTGATTGTAATAA  100
      ||||||  |||||   |||||||||  || |||||   ||| ||||||||
seq2  GAAGGC--ACTTA--GTTTGTTTTT--AG-TACTG--CTGA-TGTAATAA  83

seq1  TCTGTAGTTCATTTATATAATAGCCTTTGTGGGGTTATACTGATGTGTGT  150
      || |||||||| ||| | ||||||||||| ||||||||||||||||||||
seq2  TC-GTAGTTCA-TTAAAAAATAGCCTTTG-GGGGTTATACTGATGTGTGT  130

seq1  GTGTGTGTGTGCATGCGCATGCACGTGTGTGTGTGCACACTCATGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGCATGCGCATGCACGTGTGTGTGTGCACACTCATGTGTAT  180

seq1  GCACACACGTGCACATGTATGGTTAGTTGTGCTTGCCTGTTATATGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACGTGCACATGTATGGTTAGTTGTGCTTGCCTGTTATATGAACA  230

seq1  TGTAGAAGACAGAGGTTGACGTCAGGTGTTTCCCTCTCCCAGCCTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGACAGAGGTTGACGTCAGGTGTTTCCCTCTCCCAGCCTCCACA  280

seq1  GCATTTTTTGAAACAGGATCTCTCACTGACCCTAGGTGCGTCTGTTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTGAAACAGGATCTCTCACTGACCCTAGGTGCGTCTGTTGAGG  330

seq1  CAAAGCAGATTTATAGTTCGGCCCTAGGATTCACCTGTCTCTGACCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGATTTATAGTTCGGCCCTAGGATTCACCTGTCTCTGACCCCCA  380

seq1  ATCTCTGGGGTTACAGATGTGTGCCACGATGCCTGGATTTTGACATGGGT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCT-GGGTTACAGATGTGTGCCACGATGCCTGGATTTTGACATGGGT  429

seq1  GCTGGAGAGCAAAGTCCAGGTCTTCATGCTTGTGCAGCAAATACTTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGCAAAGTCCAGGTCTTCATGCTTGTGCAGCAAATACTTAGCT  479

seq1  CTCTGAGCCGTCTCCCTAACCCTGTGTGTAGGCTAGCCTTTGGATCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCCGTCTCCCTAACCCTGTGTGTAGGCTAGCCTTTGGATCCTGG  529

seq1  CCTTATTAACATCTGGAATGGAAGAAGACGGAATCTTTGTAACTATAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTAACATCTGGAATGGAAGAAGACGGAATCTTTGTAACTATAGAG  579

seq1  GAGAAATGGGAACCTGGTAAATATAAATTAAAAAAAAACATTCAAGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGGGAACCTGGTAAATATAAATTAAAAAAAAACATTCAAGAAAT  629

seq1  TTATTTCCCTTTTATGACACATTGTCAATTTTTTATTGAGCTAATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCCTTTTATGACACATTGTCAATTTTTTATTGAGCTAATTTTAT  679

seq1  AACTAAAATAAAATGAAATTGCCAAAGCATATTGACTATTCAGTTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAATAAAATGAAATTGCCAAAGCATATTGACTATTCAGTTGTTTG  729

seq1  GTGTCTCAGTCAGCTTCTTAATAACATTTTAATTACTCAACCACTGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCAGTCAGCTTCTTAATAACATTTTAATTACTCAACCACTGGGCA  779

seq1  AAATAAGTGATCTAAAACATGCTTTATTAGTCAAAGAAAAATTTAAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTGATCTAAAACATGCTTTATTAGTCAAAGAAAAATTTAAACAC  829

seq1  CAACTTTCTGGTTTTGTTCTTTTTTAAAAAAAAAAAGATTTACTTATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTCTGGTTTTGTTCTTTTTTAAAAAAAAAAAGATTTACTTATTAT  879

seq1  TATATGTTAGTACACTGTATTTGTCTTTAGACACACCAGAAGAGGGCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTAGTACACTGTATTTGTCTTTAGACACACCAGAAGAGGGCATC  929

seq1  ATATCTCATTATGGATGGTTGTGAGCCATCATTGTGGTTGCTGGGATTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCATTATGGATGGTTGTGAGCCATCATTGTGGTTGCTGGGATTTG  979

seq1  AACTCTGGACCTTCAGAAGAGCAGTCAATGCTCTTACCCGCTGAGCCATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGACCTTCAGAAGAGCAGTCAATGCTCTTACCCGCTGAGCCATC  1029

seq1  TCTTAGCCCTGGTTTTATTCTTATTACCCAGTCACAGGTAGGTCTTATTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCCCTGGTTTTATTCTTATTACCCAGTCACAGGTAGGTCTTATTA  1079

seq1  TAATGACTATAAGTTAATAGCCTGGTACGAAATACAGAAGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACTATAAGTTAATAGCCTGGTACGAAATACAGAAGAATTC  1124