BAC Information

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BAC

Clone NameB6Ng01-057K17
Chromosome1 (Build37)
Map Location 72,434,931 - 72,529,982
singlet/doubletdoublet
Overlap geneXrcc5, March4
Upstream geneAbca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169
Downstream geneSmarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057K17.bB6Ng01-057K17.g
ACCDH879472DH879473
length915334
definitionDH879472|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K17, 5' end.DH879473|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,434,931 - 72,435,851)(72,529,649 - 72,529,982)
sequence
gaattcaagtactcgtgtatgtagcaagtatttttagctctgaatttagt
atttatatcaaatgtttatatgataatagtttaacttccacattgtgtga
tattcatttaggacatgtgtatgtgtacatatcatattcagataagagaa
ggaaataatgggaataaattttgtatttatttcactgcaaaatcagtggt
tctcactgccactctgattttctcagtgaccttctaagagcctacaagag
tgaaataccatcctgttaccactgggaagccaagccctagaaagcttaaa
tggggctatactgtgagaagaggcagcaagattagaatgccagtctctgt
gcactgcactgggccttggttcccaagtgaacgaatggtcttctcagtag
aacctttgaccagcggtcactagaacacacttgtctccatctgcttcatt
tccacaagtaactggcaccaccaagacctgcttacagtgacctaaagacc
gtaaagtagagcctgaactgtgattccgcttcagagtgcattctgtctgt
gtcatgtgcagttaggcttttgtgtctgccctaatatcaatgaacctttt
atactaaagatgcttttatggctggggattgctctggggtaaagcactta
gtacacaacaaagaaaaagggactgtgggagaaggcaaggactggcctgg
agttctcctctgacctcctgcacagtgcggtgtgtgtgtgtttttaagtt
tatgtgtatatgtattttgcttgcatgtatgtatgtgcactatgtgcatg
cctggtcccctcagaatcagaaaaggcaccagatcccctggatccagtta
cagacagctgtgaactaactcaggccgtttggaagagattagtgctctga
attattaggcagtct
caaacttcacccagtcacagaaactatttgcagctggcaaaaccacaccc
ctgctagagcatgaggcaaatcatagtcagctgctgtggacagtctgaag
cagccctgtatcccacacctgggattaaaacgaaaacacatttttatatt
tctgtgcttttaaagaaaccaaaatcctcacatttctgtttagagtaagt
atcagctgtttactaactgcaattgccctcaatgaaggagcagcctctat
aaggagagacactctgagggcaaagctagataaccacctggtggccatgc
ttaccagagtgcttggtggtggtgggggggggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72434931_72435851
seq2: B6Ng01-057K17.b_47_961

seq1  GAATTCAAGTACTCGTGTATGTAGCAAGTATTTTTAGCTCTGAATTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTACTCGTGTATGTAGCAAGTATTTTTAGCTCTGAATTTAGT  50

seq1  ATTTATATCAAATGTTTATATGATAATAGTTTAACTTCCACATTGTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATCAAATGTTTATATGATAATAGTTTAACTTCCACATTGTGTGA  100

seq1  TATTCATTTAGGACATGTGTATGTGTACATATCATATTCAGATAAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTAGGACATGTGTATGTGTACATATCATATTCAGATAAGAGAA  150

seq1  GGAAATAATGGGAATAAATTTTGTATTTATTTCACTGCAAAATCAGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAATGGGAATAAATTTTGTATTTATTTCACTGCAAAATCAGTGGT  200

seq1  TCTCACTGCCACTCTGATTTTCTCAGTGACCTTCTAAGAGCCTACAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGCCACTCTGATTTTCTCAGTGACCTTCTAAGAGCCTACAAGAG  250

seq1  TGAAATACCATCCTGTTACCACTGGGAAGCCAAGCCCTAGAAAGCTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACCATCCTGTTACCACTGGGAAGCCAAGCCCTAGAAAGCTTAAA  300

seq1  TGGGGCTATACTGTGAGAAGAGGCAGCAAGATTAGAATGCCAGTCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTATACTGTGAGAAGAGGCAGCAAGATTAGAATGCCAGTCTCTGT  350

seq1  GCACTGCACTGGGCCTTGGTTCCCAAGTGAACGAATGGTCTTCTCAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCACTGGGCCTTGGTTCCCAAGTGAACGAATGGTCTTCTCAGTAG  400

seq1  AACCTTTGACCAGCGGTCACTAGAACACACTTGTCTCCATCTGCTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTGACCAGCGGTCACTAGAACACACTTGTCTCCATCTGCTTCATT  450

seq1  TCCACAAGTAACTGGCACCACCAAGACCTGCTTACAGTGACCTAAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAGTAACTGGCACCACCAAGACCTGCTTACAGTGACCTAAAGACC  500

seq1  GTAAAGTAGAGCCTGAACTGTGATTCCGCTTCAGAGTGCATTCTGTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTAGAGCCTGAACTGTGATTCCGCTTCAGAGTGCATTCTGTCTGT  550

seq1  GTCATGTGCAGTTAGGCTTTTGTGTCTGCCCTAATATCAATGAACCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGCAGTTAGGCTTTTGTGTCTGCCCTAATATCAATGAACCTTTT  600

seq1  ATACTAAAGATGCTTTTATGGCTGGGGATTGCTCTGGGGTAAAGCACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAGATGCTTTTATGGCTGGGGATTGCTCTGGGGTAAAGCACTTA  650

seq1  GTACACAACAAAGAAAAAGGGACTGTGGGAGAAGGCAAGGACTGGCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAACAAAGAAAAAGGGACTGTGGGAGAAGGCAAGGACTGGCCTGG  700

seq1  AGTTCTCCTCTGACCTCCTGCACAGTGCGGTGTGTGTGTGTTTTTAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCTCTGACCTCCTGCACAGTGCGGTGTGTGTGTGTTTTTAAGTT  750

seq1  TATGTGTATATGTATTTTGCTTGCATGTATGTATGTGCACTATGTGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATATGTATTTTGCTTGCATGTATGTATGTGCACTATGTGCATG  800

seq1  CCTGGTCCCCTCAGAATCAGAAGAGGGCACCAGATCCCCTGGGATCCAAG  850
      |||||||||||||||||||||| | ||||||||||||||| |||||| ||
seq2  CCTGGTCCCCTCAGAATCAGAA-AAGGCACCAGATCCCCT-GGATCC-AG  847

seq1  TTACAGACAGCTGTGAACTAACTCAGGCCGTCTGGAAGGAGAGTTAGTGC  900
      ||||||||||||||||||||||||||||||| ||||| |||| |||||||
seq2  TTACAGACAGCTGTGAACTAACTCAGGCCGTTTGGAA-GAGA-TTAGTGC  895

seq1  TCTGAACTAGTTAGGCAGTCT  921
      |||||| || |||||||||||
seq2  TCTGAATTA-TTAGGCAGTCT  915

seq1: chr1_72529649_72529982
seq2: B6Ng01-057K17.g_75_408 (reverse)

seq1  TGCCCCCCCCCACCACCACCAAGCACTCTGGTAAGCATGGCCACCAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCCCACCACCACCAAGCACTCTGGTAAGCATGGCCACCAGGTG  50

seq1  GTTATCTAGCTTTGCCCTCAGAGTGTCTCTCCTTATAGAGGCTGCTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTAGCTTTGCCCTCAGAGTGTCTCTCCTTATAGAGGCTGCTCCTT  100

seq1  CATTGAGGGCAATTGCAGTTAGTAAACAGCTGATACTTACTCTAAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGGGCAATTGCAGTTAGTAAACAGCTGATACTTACTCTAAACAGA  150

seq1  AATGTGAGGATTTTGGTTTCTTTAAAAGCACAGAAATATAAAAATGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGGATTTTGGTTTCTTTAAAAGCACAGAAATATAAAAATGTGTT  200

seq1  TTCGTTTTAATCCCAGGTGTGGGATACAGGGCTGCTTCAGACTGTCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTTTAATCCCAGGTGTGGGATACAGGGCTGCTTCAGACTGTCCACA  250

seq1  GCAGCTGACTATGATTTGCCTCATGCTCTAGCAGGGGTGTGGTTTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGACTATGATTTGCCTCATGCTCTAGCAGGGGTGTGGTTTTGCCA  300

seq1  GCTGCAAATAGTTTCTGTGACTGGGTGAGGTTTG  334
      |||||||||||||||||||||||||||| |||||
seq2  GCTGCAAATAGTTTCTGTGACTGGGTGAAGTTTG  334