BAC Information

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BAC

Clone NameB6Ng01-057P23
Chromosome1 (Build37)
Map Location 153,099,443 - 153,218,433
singlet/doubletdoublet
Overlap geneIvns1abp, 1200016B10Rik
Upstream geneLOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286
Downstream gene1190005F20Rik, Rnf2, Niban, Edem3, 1700025G04Rik, LOC668076, 5730449L18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057P23.bB6Ng01-057P23.g
ACCDH879697DH879698
length226930
definitionDH879697|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P23, 5' end.DH879698|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,218,208 - 153,218,433)(153,099,443 - 153,100,375)
sequence
ctggaacctaaggaggtggggagggaggaagaaaaggaatgaatgaatga
atgagtgagtgagtgagtgagtgaagggaagaggaagggacagaaatacc
gttaattcaaaccttttcctaaatcaaacctctttaaaaaattttttatt
ttatatatatatatgagtacactgtagctgtcttcagacacacttgaaga
gggcatcagattccattacagatggt
gaattccataatgcaagtcattgtgcaatgactcaaagagacagcaacag
cgtctttcttctccagggtggtgaataacgtgagactgaaggtaaaagca
aacattgctgtcctgctaaatgaatatagaaaagccgtgcttcctaacaa
ctcatagactctgctctactcacagatcagggctttgctcagccatcatc
aaaggggcttcctcctcagcagacgggaacaaatacagagacccataatg
tctctgccagacattaggcagagagtgagagagcagggaacactctgctc
cagaacagaccccttcatctaatcccttttcccgggaccccagcaactct
gcagaggaggagacagaaagaatgcaagagccagagagaatggaggacac
cacagaaccaaggcctactaggcccaataaggccagtgcagaaacaaact
cacagagactgcggcagcgtgcacggggaatgcacaggtttgtgccaggt
ggagctctattgctgagagcgcaagtagacacgctcctcaccctaaccca
gaagctatctctgattaatagccacttgcaaatgaaaaatttgttttttc
caaggaagtctcactgaggaaacaaaccactcttaagggcaggctacagg
cacctttagggctttttttaaactcataatgttaagttagggcttttttt
ttttttaactttataggtcctttgcttcctggttggaactttttagtgtg
tgtgtgtgtctgtgtgtgtctgtgtgtatgcacgtctttgtgcatgtatg
tgtgtctgtgtctctgtgtgtgtatatgcatgtgtcttgtgtaaatgtgt
atttgtctctcagtatgtgtctttgatgtgtggcacgtgcacacttatat
gcatttcttgagctttactttggctctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_153218208_153218433
seq2: B6Ng01-057P23.b_55_280 (reverse)

seq1  ACCATCTGTAATGGGATCTGATGCCCTCTTCAGGTGTGTCTGAAGACAGC  50
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  ACCATCTGTAATGGAATCTGATGCCCTCTTCAAGTGTGTCTGAAGACAGC  50

seq1  TACAGTGTACTCATATATATATATAAAATAAAAAATTTTTTAAAGAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTACTCATATATATATATAAAATAAAAAATTTTTTAAAGAGGTT  100

seq1  TGATTTAGGAAAAGGTTTGAATTAACGGTATTTCTGTCCCTTCCTCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGGAAAAGGTTTGAATTAACGGTATTTCTGTCCCTTCCTCTTCC  150

seq1  CTTCACTCACTCACTCACTCACTCATTCATTCATTCATTCCTTTTCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCACTCACTCACTCACTCATTCATTCATTCATTCCTTTTCTTCC  200

seq1  TCCCTCCCCACCTCCTTAGGTTCCAG  226
      ||||||||||||||||||||||||||
seq2  TCCCTCCCCACCTCCTTAGGTTCCAG  226

seq1: chr1_153099443_153100375
seq2: B6Ng01-057P23.g_71_1000

seq1  GAATTCCATAATGCAAGTCATTGTGCAATGACTCAAAGAGACAGCAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATGCAAGTCATTGTGCAATGACTCAAAGAGACAGCAACAG  50

seq1  CGTCTTTCTTCTCCAGGGTGGTGAATAACGTGAGACTGAAGGTAAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTTCTTCTCCAGGGTGGTGAATAACGTGAGACTGAAGGTAAAAGCA  100

seq1  AACATTGCTGTCCTGCTAAATGAATATAGAAAAGCCGTGCTTCCTAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGCTGTCCTGCTAAATGAATATAGAAAAGCCGTGCTTCCTAACAA  150

seq1  CTCATAGACTCTGCTCTACTCACAGATCAGGGCTTTGCTCAGCCATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGACTCTGCTCTACTCACAGATCAGGGCTTTGCTCAGCCATCATC  200

seq1  AAAGGGGCTTCCTCCTCAGCAGACGGGAACAAATACAGAGACCCATAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCTTCCTCCTCAGCAGACGGGAACAAATACAGAGACCCATAATG  250

seq1  TCTCTGCCAGACATTAGGCAGAGAGTGAGAGAGCAGGGAACACTCTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCAGACATTAGGCAGAGAGTGAGAGAGCAGGGAACACTCTGCTC  300

seq1  CAGAACAGACCCCTTCATCTAATCCCTTTTCCCGGGACCCCAGCAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGACCCCTTCATCTAATCCCTTTTCCCGGGACCCCAGCAACTCT  350

seq1  GCAGAGGAGGAGACAGAAAGAATGCAAGAGCCAGAGAGAATGGAGGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGAGGAGACAGAAAGAATGCAAGAGCCAGAGAGAATGGAGGACAC  400

seq1  CACAGAACCAAGGCCTACTAGGCCCAATAAGGCCAGTGCAGAAACAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACCAAGGCCTACTAGGCCCAATAAGGCCAGTGCAGAAACAAACT  450

seq1  CACAGAGACTGCGGCAGCGTGCACGGGGAATGCACAGGTTTGTGCCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACTGCGGCAGCGTGCACGGGGAATGCACAGGTTTGTGCCAGGT  500

seq1  GGAGCTCTATTGCTGAGAGCGCAAGTAGACACGCTCCTCACCCTAACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTATTGCTGAGAGCGCAAGTAGACACGCTCCTCACCCTAACCCA  550

seq1  GAAGCTATCTCTGATTAATAGCCACTTGCAAATGAAAAATTTGTTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTATCTCTGATTAATAGCCACTTGCAAATGAAAAATTTGTTTTTTC  600

seq1  CAAGGAAGTCTCACTGAGGAAACAAACCACTCTTAAGGGCAGGCTACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGTCTCACTGAGGAAACAAACCACTCTTAAGGGCAGGCTACAGG  650

seq1  CACCTTTAGGGCTTTTTTTAAACTCATAATGTTAAGTTAGGGC-TTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACCTTTAGGGCTTTTTTTAAACTCATAATGTTAAGTTAGGGCTTTTTTT  700

seq1  TTTTTTAACTTTATAGGTCCTTTGCTTCCTGGTTGGAACTTTTTAGTGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAACTTTATAGGTCCTTTGCTTCCTGGTTGGAACTTTTTAGTGTG  750

seq1  TGTGTGTGTCTGTGTGTGTCTGTGTGTATGCACGTCTTTGTGCATGTATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCTGTGTGTGTCTGTGTGTATGCACGTCTTTGTGCATGTATG  800

seq1  TGTGTCTGTGTCTCTGTGTGTGTATATGCATGTGTCTTTGTGTATATGTG  849
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TGTGTCTGTGTCTCTGTGTGTGTATATGCATGTGTC-TTGTGTAAATGTG  849

seq1  TATTTGTCTCTCTGTATGTGTCTTTGTATGTGTGTGCACGTGCACACTTA  899
      |||||||||||| ||||||||||||| ||||||| |||||||||||||||
seq2  TATTTGTCTCTCAGTATGTGTCTTTG-ATGTGTG-GCACGTGCACACTTA  897

seq1  TATGCATTTCTTGAGCTTTTACTTTGGCTCTTTT  933
      |||||||||||||||| |||||||||||||||||
seq2  TATGCATTTCTTGAGC-TTTACTTTGGCTCTTTT  930