BAC Information

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BAC

Clone NameB6Ng01-058J16
Chromosome1 (Build37)
Map Location 132,252,887 - 132,253,161
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058J16.bB6Ng01-058J16.g
ACCDH880137DH880138
length2751,030
definitionDH880137|Mus musculus domesticus DNA, BAC clone: B6Ng01-058J16, 5' end.DH880138|Mus musculus domesticus DNA, BAC clone: B6Ng01-058J16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatggcttgccaggtccacacagcacttggaaaacagtattgatattcca
ttttagctttggcctctttgcttccactcttatgagcagctcagccaagc
acttgcaaacaaatctaaaacagatttgatcagcttttctgttttcaaag
aatgtttatttattcatttatgtgcacgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgttacatatgaggaagttaaaagacagcagtaaggagtcaa
gtctcctgtcattttttgggaatct
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaaaatcctttcccaaactgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacaggataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagttttaatcat
acagattctttacttcttagttagaggcacgcctagatattttatattat
tggtgactattggagaggtggttgtttcctaattccttctcagctgttat
cctggtgtgaggagaggcattgacttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132252887_132253161
seq2: B6Ng01-058J16.b_54_328 (reverse)

seq1  AGATTCCCATAAAATGACAGGAGACTTGACTCCCTACAGCTGTCTTTTAA  50
      ||||||||| ||||||||||||||||||||||| ||| ||||||||||||
seq2  AGATTCCCAAAAAATGACAGGAGACTTGACTCCTTACTGCTGTCTTTTAA  50

seq1  CTTCCTCATATGTAACACACACACACACACACACACACACACACACACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCATATGTAACACACACACACACACACACACACACACACACACGT  100

seq1  GCACATAAATGAATAAATAAACATTCTTTGAAAACAGAAAAGCTGATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAATGAATAAATAAACATTCTTTGAAAACAGAAAAGCTGATCAA  150

seq1  ATCTGTTTTAGATTTGTTTGCAAGTGCTTGGCTGAGCTGCTCATAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTTAGATTTGTTTGCAAGTGCTTGGCTGAGCTGCTCATAAGAGT  200

seq1  GGAAGCAAAGAGGCCAAAGCTAAAATGGAATATCAATACTGTTTTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAAAGAGGCCAAAGCTAAAATGGAATATCAATACTGTTTTCCAAG  250

seq1  TGCTGTGTGGACCTGGCAAGCCATT  275
      |||||||||||||||||||||||||
seq2  TGCTGTGTGGACCTGGCAAGCCATT  275