BAC Information

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BAC

Clone NameB6Ng01-058L09
Chromosome1 (Build37)
Map Location 48,922,108 - 48,923,195
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546734, LOC674566, LOC100041936, LOC666903
Downstream geneLOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058L09.bB6Ng01-058L09.g
ACCDH880214DH880215
length1,0751,162
definitionDH880214|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L09, 5' end.DH880215|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatgctccagtagatgaccatttaactgtgcatgtatgggaca
cattaattgaacttattatattagtaccaaagaatgaaatttggcatgaa
gttgaattgaagtgtgtttatataacctgtaaaatttgaaaaggcataag
attaatgacaacgacttgaccaatcaacagtattgagaaagagaatgaaa
taaaggacttttttcaataaaaggtacagacaaaatatatatttacacct
tcaggcaccatgtctgggaaatggaagccacagacatatctcagtgtcta
atggtcagtgtgaatgtgaggattccttctgagtccatcaatcactgagt
ctgtgtagcaaaaaagctgcttagacagcagcaattgatcagtaacttga
agttgtgggcatagtgactgaatacagactggatatgtacactggatgga
agaatcctcaggtaatacatcacttatttcagacatgcacataaatagga
ctgtactatcctgagaccctgtcattgcatgtaggtgtataaaggacagc
agaagaagagcacaatactgatacctctcataattcctcttaattttgat
ttatgtttctatattttgaggaaattttctgagattttatgtattgtaat
tttgtatcttggtaagaatacagaaattactggtggttttgaataggaaa
tattaataactattaactgctttgtaaacacacactagccaaaattttct
agttcatttttataaacagcagacatgtgaatgtgaaatgaattaaattt
gaaatcatctttatgtaaaggaaaggaatatttcctgaaacaatattcca
aacatatagacaaaggtgatatacagggcagatatacttctatgattgaa
tttattttaaaacatttgtgtacatcttatcaagtgaataatgcagtaat
cattttttcttttaaagcatttcaataagactctattcatgccttggtta
ttaatatgttcagatactcagtaaatatattaaatgatacatgttatatg
gaatatgatggatataggaaacaat
gaattcctgatctttctaagacttttatcatgaatgagtgttggattttt
ttttcaaatgctttctcagcatctaacgagatgatcatgaggattttgtc
tttgagtttatttatatagtggattacattgatggattttcatatataaa
accatccctgcatccctggaatgaagtctacttgatcatgacggatggcc
atttgatgtgttcctggattccgttagcaagaattttatcgagtattttt
gcatcaatattcataagagaaattggtctgaagttctctatctttggtct
tcatgtggtttatgtatcagagtaattgtggcttcacagaaggaattcat
tgagtaccttcagcttctattttgttgaatagtttgaggagaactggcat
gagttcttctttgaaggtccgatagaactctgcactaaacccatctgttc
ttgggactttttttttttaaggttgagagactattaatgactacttctat
ttctttaggggactctttaagtcattaatctgatcctgatttaactttgg
taccttgtatctgtctagaaatttgtctatgtcatcctgattttccagtt
gtgttgagtacagccttttgtagtaggatctgatagtgttttggatttcc
gcaggatctgttgttatgcctcccttttcatttctgattttgttaattag
catactgtccctgtgacctctagtgagtctggctaagtgtttatctatct
tgttgattttctcaaagaaccagctcctggtttggtttgattctttgaat
agttcattttgtttccacttggtttatttcagccctgatttttattattt
cctaccatctactcctcttgggtgaaattgctttcttctgttctagagct
tttagtgtgctacagcttttgtacgctctctctagctccttttgaaaact
cagaggtatgagttttctctattagctttcatgtgtcaggaagttaggta
ttggtctcattcattacactgtaaaacgtcttactggctttctttattct
cctggcaggtatcatgattgaaaatgtgtcagcttcagcgaatgttggct
tcatattagttgtattgaacaccgcttgacctggtgatatgtaaggctct
aggaatatcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48922108_48923195
seq2: B6Ng01-058L09.b_44_1118

seq1  GAATTCCTATGCTCCAGTAGATGACCATTTAACTGTGCATGTATGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGCTCCAGTAGATGACCATTTAACTGTGCATGTATGGGACA  50

seq1  CATTAATTGAACTTATTATATTAGTACCAAAGAATGAAATTTGGCATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTGAACTTATTATATTAGTACCAAAGAATGAAATTTGGCATGAA  100

seq1  GTTGAATTGAAGTGTGTTTATATAACCTGTAAAATTTGAAAAGGCATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTGAAGTGTGTTTATATAACCTGTAAAATTTGAAAAGGCATAAG  150

seq1  ATTAATGACAACGACTTGACCAATCAACAGTATTGAGAAAGAGAATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGACAACGACTTGACCAATCAACAGTATTGAGAAAGAGAATGAAA  200

seq1  TAAAGGACTTTTTTCAATAAAAGGTACAGACAAAATATATATTTACACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGACTTTTTTCAATAAAAGGTACAGACAAAATATATATTTACACCT  250

seq1  TCAGGCACCATGTCTGGGAAATGGAAGCCACAGACATATCTCAGTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACCATGTCTGGGAAATGGAAGCCACAGACATATCTCAGTGTCTA  300

seq1  ATGGTCAGTGTGAATGTGAGGATTCCTTCTGAGTCCATCAATCACTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAGTGTGAATGTGAGGATTCCTTCTGAGTCCATCAATCACTGAGT  350

seq1  CTGTGTAGCAAAAAAGCTGCTTAGACAGCAGCAATTGATCAGTAACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGCAAAAAAGCTGCTTAGACAGCAGCAATTGATCAGTAACTTGA  400

seq1  AGTTGTGGGCATAGTGACTGAATACAGACTGGATATGTACACTGGATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGGCATAGTGACTGAATACAGACTGGATATGTACACTGGATGGA  450

seq1  AGAATCCTCAGGTAATACATCACTTATTTCAGACATGCACATAAATAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTCAGGTAATACATCACTTATTTCAGACATGCACATAAATAGGA  500

seq1  CTGTACTATCCTGAGACCCTGTCATTGCATGTAGGTGTATAAAGGACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTATCCTGAGACCCTGTCATTGCATGTAGGTGTATAAAGGACAGC  550

seq1  AGAAGAAGAGCACAATACTGATACCTCTCATAATTCCTCTTAATTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAGCACAATACTGATACCTCTCATAATTCCTCTTAATTTTGAT  600

seq1  TTATGTTTCTATATTTTGAGGAAATTTTCTGAGATTTTATGTATTGTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTCTATATTTTGAGGAAATTTTCTGAGATTTTATGTATTGTAAT  650

seq1  TTTGTATCTTGGTAAGAATACAGAAATTACTGGTGGTTTTGAATAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCTTGGTAAGAATACAGAAATTACTGGTGGTTTTGAATAGGAAA  700

seq1  TATTAATAACTATTAACTGCTTTGTAAACACACACTAGCCAAAATTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAACTATTAACTGCTTTGTAAACACACACTAGCCAAAATTTTCT  750

seq1  AGTTCATTTTTATAAACAGCAGACATGTGAATGTGAAATGAATTAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTTTTATAAACAGCAGACATGTGAATGTGAAATGAATTAAATTT  800

seq1  GAAATCATCTTTATGTAAAGGAAAGGAATATTTCCTGAAACAATATTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATCTTTATGTAAAGGAAAGGAATATTTCCTGAAACAATATTCCA  850

seq1  AACATATAGACAAAGGTGATATACAGGGCAGATATTACTTCTATGATTGA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACATATAGACAAAGGTGATATACAGGGCAGATA-TACTTCTATGATTGA  899

seq1  ATTTATTTTTAAAAACATTTGTGTACATCTTATCAAGTGAATAATGCAGT  950
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTT--AAAACATTTGTGTACATCTTATCAAGTGAATAATGCAGT  947

seq1  AATCA-TTTTTCTTTTAAGGCATTTTCAAATAAGACTCTATTCATGCCTT  999
      ||||| |||||||||||| ||||||   ||||||||||||||||||||||
seq2  AATCATTTTTTCTTTTAAAGCATTT--CAATAAGACTCTATTCATGCCTT  995

seq1  GGTTATATAATATGTTTCAGATAACTCAGTAAATTAATATTAAATGATAC  1049
      |||||| ||||||| ||||||| |||||||||||  ||||||||||||||
seq2  GGTTAT-TAATATG-TTCAGAT-ACTCAGTAAAT--ATATTAAATGATAC  1040

seq1  ATGTTATATGGAATATGAATGGATAATTAAGGAAACAAT  1088
      ||||||||||||||||| |||||||    ||||||||||
seq2  ATGTTATATGGAATATG-ATGGATA---TAGGAAACAAT  1075