BAC Information

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BAC

Clone NameB6Ng01-059F10
Chromosome1 (Build37)
Map Location 196,081,862 - 196,082,895
singlet/doubletsinglet
Overlap genenone
Upstream geneHsd11b1, G0s2, Lamb3, Camk1g, LOC667208
Downstream geneEG623172, Plxna2, Cd34, Cd46, Crry, Cr2, EG635956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059F10.bB6Ng01-059F10.g
ACCDH880652DH880653
length1,2601,031
definitionDH880652|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F10, 5' end.DH880653|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaagctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccataaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaagacagcattttcacaattggtgctggca
caactggttgttatcgtgtagaaaatgcaaatcgatcatacttatctcct
tgtactagtcaaatctagtggatcaggacctcacataaaccgagaacctg
aactatgaggaaagtgggaaagctttgagatatggccacagggaaatcct
gacagaaccgccatgcttggtgctgtagaatcggaatgacattggaactt
atggaaccaagtctgcagcaagaccttcatcgacaaaagacccacacgat
gagcttctctatacatagccatatccattaagactcaaaggactccgaac
taataccctt
gaattccaagtccctctaaaatattcaagatgccagagagatactgtcta
ccaatacacaagaggaaatagccattgtcccaagtgattaaagttggact
tgaggaaatttttgttttgggtcatataagttgttaaaatacatccacac
acaatttcatacttagcaattttaaaaacaagaaccatttttagcctgaa
atgattctgaattgatccaaagaagaggcaggaggatagattagatgacc
tttaaaagctgatggaatatgttgcactctgtcatttggtcttatctgtg
ggtaacaactcaatactccaaagtgccagtccctggagttgagcatctta
tatcctctaaggctctgagactcacagattctgtcttgtgccaggagttc
taactacctcaaagttcaataatggcagacctcacacggacaaggaggca
ggcagagaacaggctggttggcacaccattgctcccttagggagccaagt
aaagctaccagccaaggcatgctgttgccatctcgacccgtgctgcacag
catggagaaggtttatggtggctctgtcctcaagccataaagtttattcc
tgtaattagccagcccattgtcccttgctccagctctctttcatctttag
tggatttgtcaggatgcactttatacacagactgactcaagcaggacagt
gctggcaggtggggctgtctgtccatcagaaccttaacacaggaagttag
tcggtagccactacacccaatgtgtttcacttattgtcttctgggatgta
ggtattaacatgcttaactccacaaacaagaggagaggtggcctagtcat
gatgggtcaactgcagaccattcagtgggccatgaaagaaaaggagggat
ggcctctgttcagactcttctaagaagccgtgttttgcctgagcattcat
tcttcagtacagaggacaaaatattccataaactcgaggactgagagatg
ggaattgagaagaagaatggatattctcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_196081862_196082895
seq2: B6Ng01-059F10.g_69_1099 (reverse)

seq1  GATGAGAATATCCATTCATCCTCTCAATTCCCACTCTCTCAGTCCTCGAG  50
      ||||||||||||||||| || |||||||||||| ||||||||||||||||
seq2  GATGAGAATATCCATTCTTCTTCTCAATTCCCA-TCTCTCAGTCCTCGAG  49

seq1  TTTATTGAAATATTTTTGTCCTCTGTACTGAAGAATGAATGCTCAGGCAA  100
      |||| || |||| ||||||||||||||||||||||||||||||||||| |
seq2  TTTA-TGGAATA-TTTTGTCCTCTGTACTGAAGAATGAATGCTCAGGC-A  96

seq1  AAACACGGCTTCTTAGAAGAGTCTG-ACAGAGGCCATCCCTCC-TTTCCT  148
      ||||||||||||||||||||||||| ||||||||||||||||| |||| |
seq2  AAACACGGCTTCTTAGAAGAGTCTGAACAGAGGCCATCCCTCCTTTTCTT  146

seq1  TCATGGCCCACTGAATGGGTCTGCAGTTGACCCATTCATGACTAGGCCAC  198
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  TCATGGCCCACTGAAT-GGTCTGCAGTTGACCCA-TCATGACTAGGCCAC  194

seq1  CTCTCTTCTTG-TTGTGGAGTTAAGCATGTTAATACCTACATCCCAGAAG  247
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTTGTTTGTGGAGTTAAGCATGTTAATACCTACATCCCAGAAG  244

seq1  ACAATAAGTGAAACACATTGGGTGTAGTGGCTACCGACTAACTTCCTGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGTGAAACACATTGGGTGTAGTGGCTACCGACTAACTTCCTGTG  294

seq1  TTAAGGTTCTGATGGACAGACAGCCCCACCTGCCAGCACTGTCCTGCTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTTCTGATGGACAGACAGCCCCACCTGCCAGCACTGTCCTGCTTG  344

seq1  AGTCAGTCTGTGTATAAAGTGCATCCTGACAAATCCACTAAAGATGAAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCTGTGTATAAAGTGCATCCTGACAAATCCACTAAAGATGAAAG  394

seq1  AGAGCTGGAGCAAGGGACAATGGGCTGGCTAATTACAGGAATAAACTTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGAGCAAGGGACAATGGGCTGGCTAATTACAGGAATAAACTTTA  444

seq1  TGGCTTGAGGACAGAGCCACCATAAACCTTCTCCATGCTGTGCAGCACGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAGGACAGAGCCACCATAAACCTTCTCCATGCTGTGCAGCACGG  494

seq1  GTCGAGATGGCAACAGCATGCCTTGGCTGGTAGCTTTACTTGGCTCCCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAGATGGCAACAGCATGCCTTGGCTGGTAGCTTTACTTGGCTCCCTA  544

seq1  AGGGAGCAATGGTGTGCCAACCAGCCTGTTCTCTGCCTGCCTCCTTGTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCAATGGTGTGCCAACCAGCCTGTTCTCTGCCTGCCTCCTTGTCC  594

seq1  GTGTGAGGTCTGCCATTATTGAACTTTGAGGTAGTTAGAACTCCTGGCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGTCTGCCATTATTGAACTTTGAGGTAGTTAGAACTCCTGGCAC  644

seq1  AAGACAGAATCTGTGAGTCTCAGAGCCTTAGAGGATATAAGATGCTCAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAATCTGTGAGTCTCAGAGCCTTAGAGGATATAAGATGCTCAAC  694

seq1  TCCAGGGACTGGCACTTTGGAGTATTGAGTTGTTACCCACAGATAAGACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGACTGGCACTTTGGAGTATTGAGTTGTTACCCACAGATAAGACC  744

seq1  AAATGACAGAGTGCAACATATTCCATCAGCTTTTAAAGGTCATCTAATCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGAGTGCAACATATTCCATCAGCTTTTAAAGGTCATCTAATCT  794

seq1  ATCCTCCTGCCTCTTCTTTGGATCAATTCAGAATCATTTCAGGCTAAAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTGCCTCTTCTTTGGATCAATTCAGAATCATTTCAGGCTAAAAA  844

seq1  TGGTTCTTGTTTTTAAAATTGCTAAGTATGAAATTGTGTGTGGATGTATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTGTTTTTAAAATTGCTAAGTATGAAATTGTGTGTGGATGTATT  894

seq1  TTAACAACTTATATGACCCAAAACAAAAATTTCCTCAAGTCCAACTTTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACTTATATGACCCAAAACAAAAATTTCCTCAAGTCCAACTTTAA  944

seq1  TCACTTGGGACAATGGCTATTTCCTCTTGTGTATTGGTAGACAGTATCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGGACAATGGCTATTTCCTCTTGTGTATTGGTAGACAGTATCTC  994

seq1  TCTGGCATCTTGAATATTTTAGAGGGACTTGGAATTC  1034
      |||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATCTTGAATATTTTAGAGGGACTTGGAATTC  1031