BAC Information

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BAC

Clone NameB6Ng01-059G23
Chromosome1 (Build37)
Map Location 151,487,784 - 151,618,914
singlet/doubletdoublet
Overlap geneLOC100042813
Upstream geneLOC100042792, LOC435647
Downstream genePla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059G23.bB6Ng01-059G23.g
ACCDH880719DH880720
length435901
definitionDH880719|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G23, 5' end.DH880720|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,618,474 - 151,618,914)(151,487,784 - 151,488,682)
sequence
tccataataacctaatatagtagtttctatttaaatcataacatgaaaga
tagatgctatagctaagatttttttgaaattgatagtttatgttatctta
agatattagtgatggctgacttttgacaggcagccataaaatttcagtaa
ctttgcaagtactgttagaagtaaaaacttcatgttgcaaaaattaacat
ttaaattttaataagttgaaaagcttcttttttaaaaaagatctatttat
tcatttattgtatgtgagtatgctgttactgtcctcagacacactagaag
atcccattacagatggttgtaagccaccatgtggttgctggaattgaact
caggacctctggaagagcagtcagtgctcttaaccactgagccatttctc
cagacagggagatggggaggaggtatgggatgtac
gaattctgctgcatgttaaatccaccaaagaacaagtacagacacactta
aagcctaatagaacatctgtattgctgggcaactgctgcacagggaactt
ccccaaatcatgcagttctaagcctcactgttctttgtcttttataaaga
aaatcacatcctagttgtgcagttagcagtaaagggaacttaagattcta
aaaggcaaggttagtgcatttaaggactttcctgaatcctggaactatgg
actaggtcttggatggattaggtctttgtttccattttgcaattattgag
gcccatgtgctgaattttaaagttggaatgtttcctttaacattgtgttg
gttgttctatggtgtgggaaactattgtgtaccctactgactctacaagc
aggaaccaaaacatgaattcatcatggagcagacggttatattgtgaccc
tcaacaataaaaatttatcagagtttactctctgttttacatagttaagt
aagtgcctaagcagcatggtcctatagtgagggctcagaaattaaagata
agcatccccacccactgctgtatttatttagaatagttaactagagtcac
caggagaacaaggtctgatatgagttggcaaactcttgatttttttttct
gtttagttggttggttgtttttttaaggttatttttttcttacttttcca
tataatgtcatttttttcttgtattgaatgtagatacattttttctcaga
taatattacttgatcatggggtttctctacctctatacttctcagttcct
taccacctcctctcccaccaagatccactctctgtcagtggaaaacattc
ttctaaagaaatgatatgatatgaattgatagatatgaatgatatgatat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151618474_151618914
seq2: B6Ng01-059G23.b_47_487 (reverse)

seq1  GTACATCCCATACCTCCTCCCCATCTCCCTGTCTGGAGAAATGGCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCCCATACCTCCTCCCCATCTCCCTGTCTGGAGAAATGGCTCAGT  50

seq1  GGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCA  100

seq1  ACCACATGGTGGCTTACAACCATCTGTAATGGGATCTTCTAGTGTGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGGTGGCTTACAACCATCTGTAATGGGATCTTCTAGTGTGTCTG  150

seq1  AGGACAGTAACAGCATACTCACATACAATAAATGAATAAATAGATCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTAACAGCATACTCACATACAATAAATGAATAAATAGATCTTTT  200

seq1  TTAAAAAAGAAGCTTTTCAACTTATTAAAATTTAAATGTTAATTTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAGAAGCTTTTCAACTTATTAAAATTTAAATGTTAATTTTTGCA  250

seq1  ACATGAAGTTTTTACTTCTAACAGTACTTGCAAAGTTACTGAAATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGTTTTTACTTCTAACAGTACTTGCAAAGTTACTGAAATTTTAT  300

seq1  GGCTGCCTGTCAAAAGTCAGCCATCACTAATATCTTAAGATAACATAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTGTCAAAAGTCAGCCATCACTAATATCTTAAGATAACATAAAC  350

seq1  TATCAATTTCAAAAAAATCTTAGCTATAGCATCTATCTTTCATGTTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTTCAAAAAAATCTTAGCTATAGCATCTATCTTTCATGTTATGA  400

seq1  TTTAAATAGAAACTACTATATTAGGTTATTATGGAGAATTC  441
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGAAACTACTATATTAGGTTATTATGGAGAATTC  441

seq1: chr1_151487784_151488682
seq2: B6Ng01-059G23.g_67_967

seq1  GAATTCTGCTGCATGTTAAATCCACCAAAGAACAAGTACAGACACACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGCATGTTAAATCCACCAAAGAACAAGTACAGACACACTTA  50

seq1  AAGCCTAATAGAACATCTGTATTGCTGGGCAACTGCTGCACAGGGAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAATAGAACATCTGTATTGCTGGGCAACTGCTGCACAGGGAACTT  100

seq1  CCCCAAATCATGCAGTTCTAAGCCTCACTGTTCTTTGTCTTTTATAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATCATGCAGTTCTAAGCCTCACTGTTCTTTGTCTTTTATAAAGA  150

seq1  AAATCACATCCTAGTTGTGCAGTTAGCAGTAAAGGGAACTTAAGATTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACATCCTAGTTGTGCAGTTAGCAGTAAAGGGAACTTAAGATTCTA  200

seq1  AAAGGCAAGGTTAGTGCATTTAAGGACTTTCCTGAATCCTGGAACTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGGTTAGTGCATTTAAGGACTTTCCTGAATCCTGGAACTATGG  250

seq1  ACTAGGTCTTGGATGGATTAGGTCTTTGTTTCCATTTTGCAATTATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTCTTGGATGGATTAGGTCTTTGTTTCCATTTTGCAATTATTGAG  300

seq1  GCCCATGTGCTGAATTTTAAAGTTGGAATGTTTCCTTTAACATTGTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGTGCTGAATTTTAAAGTTGGAATGTTTCCTTTAACATTGTGTTG  350

seq1  GTTGTTCTATGGTGTGGGAAACTATTGTGTACCCTACTGACTCTACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTATGGTGTGGGAAACTATTGTGTACCCTACTGACTCTACAAGC  400

seq1  AGGAACCAAAACATGAATTCATCATGGAGCAGACGGTTATATTGTGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCAAAACATGAATTCATCATGGAGCAGACGGTTATATTGTGACCC  450

seq1  TCAACAATAAAAATTTATCAGAGTTTACTCTCTGTTTTACATAGTTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATAAAAATTTATCAGAGTTTACTCTCTGTTTTACATAGTTAAGT  500

seq1  AAGTGCCTAAGCAGCATGGTCCTATAGTGAGGGCTCAGAAATTAAAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCTAAGCAGCATGGTCCTATAGTGAGGGCTCAGAAATTAAAGATA  550

seq1  AGCATCCCCACCCACTGCTGTATTTATTTAGAATAGTTAACTAGAGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCCACCCACTGCTGTATTTATTTAGAATAGTTAACTAGAGTCAC  600

seq1  CAGGAGAACAAGGTCTGATATGAGTTGGCAAACTCTTGATTTTTTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAACAAGGTCTGATATGAGTTGGCAAACTCTTGATTTTTTTTTCT  650

seq1  GTTTAGTTGGTTGGTTG-TTTTTTAAGGTTATTTTTTTCTTACTTTTCCA  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTTAGTTGGTTGGTTGTTTTTTTAAGGTTATTTTTTTCTTACTTTTCCA  700

seq1  TATAATGTCA-TTTTTTCTTGTATTGAATGTAGATACA-TTTTTCTCAGA  747
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  TATAATGTCATTTTTTTCTTGTATTGAATGTAGATACATTTTTTCTCAGA  750

seq1  TAATATTACTTGATCAT-GGGTTTCTCTACCTCTATACTTCTCAGTTCCT  796
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAATATTACTTGATCATGGGGTTTCTCTACCTCTATACTTCTCAGTTCCT  800

seq1  TACCACCTCCTCTCCCACCAAGATCCACTCCCTGTCAGTGGAAAACAGTC  846
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  TACCACCTCCTCTCCCACCAAGATCCACTCTCTGTCAGTGGAAAACATTC  850

seq1  TTCTAGAAGATATGATATGATATGATATGATAGATATGATATGATATGAT  896
      ||||| |||| ||||||||||||||  |||||||||||| ||||||||||
seq2  TTCTA-AAGAAATGATATGATATGAATTGATAGATATGA-ATGATATGAT  898

seq1  ATG  899
      |||
seq2  ATG  901