BAC Information

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BAC

Clone NameB6Ng01-059K21
Chromosome1 (Build37)
Map Location 97,199,891 - 97,360,444
singlet/doubletdoublet
Overlap geneTmem157
Upstream geneLOC666025, LOC100040685, LOC383603
Downstream geneLOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059K21.bB6Ng01-059K21.g
ACCDH880885DH880886
length8731,039
definitionDH880885|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K21, 5' end.DH880886|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,359,569 - 97,360,444)(97,199,891 - 97,200,944)
sequence
gaattcatagcatctgagattacctgcacaagatcagcgcaacactgagc
cagttatcacactagcatggaagagagagaggcttctgaggctctcctct
gttcaggatttttaggacagctgatggcacctggagaagggacagtcatt
ttactttagagttgggacactggtagatagtctctgggacaatcgatgtc
cctgtacccttctacatatgagtggttctaactggactcagtccgtacat
atgaatatagcactagaggacatgaaactggcaggaaattgtccagggga
agtttatgtgggaaacagataaatatgatcagcacacatgttatatgtgt
atgtaattctcaacattttcaaaaacaatttaaagttaaatttaaaatat
atgtggaatatatatatatatatatatatatatatatatatactgattcc
aaaatgggccctagaactgtgttctttcgctcgtctctcattcccctcag
cctttaatttccaaatggatttcacactttctctaagtgaatgctcatca
accagctccagggaacttaaactctcagtcatttacttcaatgggtaaag
tagttaagttgtcaccaagtgtgcgagcctatctaagagaagtgcagggg
ttcttagtgagcttgcaaagcactttaaatgtattttaaattcggatgat
tagtggagttgtccagggaccacagggacttctgttgagtgggaagaaaa
aaaaaaaaaaaaaaagactgtcctgctgtttttcacagatagctcacact
aaaacacaaagtaattaaatgttttaattttgatccctgtggtgcctctc
ctttagagtcagcagggaggggg
gaattcactgtttggacgtaacacatctcagttatctttttatttattgg
aggatttttgggttgtttccatttcctggctagtgtgaataggtaagact
gaatattgctgagcaagattcacaaaacatgtagagtcctttgggcgcat
accagggagtgatatagttggataaatagtaggtaaatttatttttagtt
actttttggtttctgtttgttttgttgtttttgttttgttttgttttgtt
gagtgatactacacactaattagtaaaacagatgcacttatttgcatttc
cattaacagtgaatgagtttccctttcttcacaacctcatgggcatttgt
cagtcattttgcaaaatgccaagggatagaaagaattaagcagtcttact
gatctgtaacagctaagaaccacgtcaaaatatccactaagttacaatca
atgtttcacatatttcagtggtaaccaacagcttcctaaattgacttaaa
gtacaccaaatgtgattgatgtaattttctttaattataaacacattttt
aaaatattagatttttttattttaaatgttgtttttgtatcttatatcat
gagcaatggttttatggtgcattggattttacgtgtgatctaaaatctga
atttttaaatccttccaagtttattcattttacttctaacatattttact
ttaaacaacaacaataagaaagatactctgaaatgcctgaaatggagttc
taatacttttgctgtaatttgtctctttatgtgtcacttatttatgcttt
cttgacatggtcccttgggactcacactgaaagacaagcgtgcagctctc
agtcaccccaattcttttgctatagttgaatatccaagagccatggtttg
caacattcaataccgttgtctgagatggagctgtaaagtctctacagatg
agatatttcctcaagaaacttcatatatcgtatgctggaatgccacttac
cgagctatgaagcgacttcattccatttactttggcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97359569_97360444
seq2: B6Ng01-059K21.b_46_918 (reverse)

seq1  CCCCCTCCCTGCTGAGCTCTAAAGGAGAGGCACCACAGGGATCAAAATTA  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCTGCTGA-CTCTAAAGGAGAGGCACCACAGGGATCAAAATTA  49

seq1  AAACATTTAATTACTTTGTGTTTTAAGTGTGAGCTATCTGTGGAAAACAG  100
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  AAACATTTAATTACTTTGTGTTTT-AGTGTGAGCTATCTGTGAAAAACAG  98

seq1  CAGGCCAGTCTTTTTTTTTTTTTTTTTTTTTCTTCCCACTCAACAGAAGT  150
      |||| |||||  ||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGTC--TTTTTTTTTTTTTTTTTTTCTTCCCACTCAACAGAAGT  146

seq1  CCCTGTGGTCCCTGGACAACTCCACTAATCATCCGAATTT-AAATACATT  199
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTGTGGTCCCTGGACAACTCCACTAATCATCCGAATTTAAAATACATT  196

seq1  TAAAGTGCTTTGCAAGCTCACTAAGAACCCCTGCACTTCTCTTAGATAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGCTTTGCAAGCTCACTAAGAACCCCTGCACTTCTCTTAGATAGG  246

seq1  CTCGCACACTTGGTGACAACTTAACTACTTTACCCATTGAAGTAAATGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCACACTTGGTGACAACTTAACTACTTTACCCATTGAAGTAAATGAC  296

seq1  TGAGAGTTTAAGTTCCCTGGAGCTGGTTGATGAGCATTCACTTAGAGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTTAAGTTCCCTGGAGCTGGTTGATGAGCATTCACTTAGAGAAA  346

seq1  GTGTGAAATCCATTTGGAAATTAAAGGCTGAGGGGAATGAGAGACGAGCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAATCCATTTGGAAATTAAAGGCTGAGGGGAATGAGAGACGAGCG  396

seq1  AAAGAACACAGTTCTAGGGCCCATTTTGGAATCAGTATATATATATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACAGTTCTAGGGCCCATTTTGGAATCAGTATATATATATATAT  446

seq1  ATATATATATATATATATATTCCACATATATTTTAAATTTAACTTTAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATTCCACATATATTTTAAATTTAACTTTAAAT  496

seq1  TGTTTTTGAAAATGTTGAGAATTACATACACATATAACATGTGTGCTGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGAAAATGTTGAGAATTACATACACATATAACATGTGTGCTGAT  546

seq1  CATATTTATCTGTTTCCCACATAAACTTCCCCTGGACAATTTCCTGCCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTATCTGTTTCCCACATAAACTTCCCCTGGACAATTTCCTGCCAG  596

seq1  TTTCATGTCCTCTAGTGCTATATTCATATGTACGGACTGAGTCCAGTTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTCCTCTAGTGCTATATTCATATGTACGGACTGAGTCCAGTTAG  646

seq1  AACCACTCATATGTAGAAGGGTACAGGGACATCGATTGTCCCAGAGACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTCATATGTAGAAGGGTACAGGGACATCGATTGTCCCAGAGACTA  696

seq1  TCTACCAGTGTCCCAACTCTAAAGTAAAATGACTGTCCCTTCTCCAGGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAGTGTCCCAACTCTAAAGTAAAATGACTGTCCCTTCTCCAGGTG  746

seq1  CCATCAGCTGTCCTAAAAATCCTGAACAGAGGAGAGCCTCAGAAGCCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGCTGTCCTAAAAATCCTGAACAGAGGAGAGCCTCAGAAGCCTCT  796

seq1  CTCTCTTCCATGCTAGTGTGATAACTGGCTCAGTGTTGCGCTGATCTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCATGCTAGTGTGATAACTGGCTCAGTGTTGCGCTGATCTTGT  846

seq1  GCAGGTAATCTCAGATGCTATGAATTC  876
      |||||||||||||||||||||||||||
seq2  GCAGGTAATCTCAGATGCTATGAATTC  873

seq1: chr1_97199891_97200944
seq2: B6Ng01-059K21.g_73_1108

seq1  TTCACTGTTTGGACGTAACACATCTCAGTTATCTTTTTATTTATTGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTTTGGACGTAACACATCTCAGTTATCTTTTTATTTATTGGAGG  50

seq1  ATTTTTGGGTTGTTTCCATTTCCTGGCTAGTGTGAATAGGTAAGACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGGTTGTTTCCATTTCCTGGCTAGTGTGAATAGGTAAGACTGAA  100

seq1  TATTGCTGAGCAAGATTCACAAAACATGTAGAGTCCTTTGGGCGCATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGAGCAAGATTCACAAAACATGTAGAGTCCTTTGGGCGCATACC  150

seq1  AGGGAGTGATATAGTTGGATAAATAGTAGGTAAATTTATTTTTAGTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTGATATAGTTGGATAAATAGTAGGTAAATTTATTTTTAGTTACT  200

seq1  TTTTGGTTTCTGTTTGTTTTGTTGTTTTTGTTTTGTTTTGTTTTGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTCTGTTTGTTTTGTTGTTTTTGTTTTGTTTTGTTTTGTTGAG  250

seq1  TGATACTACACACTAATTAGTAAAACAGATGCACTTATTTGCATTTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTACACACTAATTAGTAAAACAGATGCACTTATTTGCATTTCCAT  300

seq1  TAACAGTGAATGAGTTTCCCTTTCTTCACAACCTCATGGGCATTTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGAATGAGTTTCCCTTTCTTCACAACCTCATGGGCATTTGTCAG  350

seq1  TCATTTTGCAAAATGCCAAGGGATAGAAAGAATTAAGCAGTCTTACTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGCAAAATGCCAAGGGATAGAAAGAATTAAGCAGTCTTACTGAT  400

seq1  CTGTAACAGCTAAGAACCACGTCAAAATATCCACTAAGTTACAATCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACAGCTAAGAACCACGTCAAAATATCCACTAAGTTACAATCAATG  450

seq1  TTTCACATATTTCAGTGGTAACCAACAGCTTCCTAAATTGACTTAAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATATTTCAGTGGTAACCAACAGCTTCCTAAATTGACTTAAAGTA  500

seq1  CACCAAATGTGATTGATGTAATTTTCTTTAATTATAAACACATTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATGTGATTGATGTAATTTTCTTTAATTATAAACACATTTTTAAA  550

seq1  ATATTAGATTTTTTTATTTTAAATGTTG-TTTTGTATCTTATATCATGAG  599
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATATTAGATTTTTTTATTTTAAATGTTGTTTTTGTATCTTATATCATGAG  600

seq1  CAATGGTTTTATGGTGCATTGGATTTTACGTGTGATCTAAAATCTGAA-T  648
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAATGGTTTTATGGTGCATTGGATTTTACGTGTGATCTAAAATCTGAATT  650

seq1  TTTAAATCCTTCCAAG-TTATTCATTTTACTTCTAACATA-TTTACTTTA  696
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TTTAAATCCTTCCAAGTTTATTCATTTTACTTCTAACATATTTTACTTTA  700

seq1  AACAACAACAATAAGAAAGATACTCTGAAATGCCTGAAATGGAGTTCTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAATAAGAAAGATACTCTGAAATGCCTGAAATGGAGTTCTAA  750

seq1  TAC-TTTGCTGTAATTTGTCTCTTTATGTGTTCACTTATTTATGCTTTCT  795
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACTTTTGCTGTAATTTGTCTCTTTATGTG-TCACTTATTTATGCTTTCT  799

seq1  TGACATGGTCCCTTGGGACTCACACTTGAAAGACAAGCGTGCCAGCTCTC  845
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  TGACATGGTCCCTTGGGACTCACAC-TGAAAGACAAGCGTG-CAGCTCTC  847

seq1  AGGTCACCCCAATTCTTTTGCTATAGTTTGAATAATCCAAGAAGCCATGG  895
      | |||||||||||||||||||||||| |||||| ||||||| ||||||||
seq2  A-GTCACCCCAATTCTTTTGCTATAG-TTGAAT-ATCCAAG-AGCCATGG  893

seq1  TTTGCAAACATTCAATACCGTTGTCTGAAGATGGCAGTCTGTAAAGTTCT  945
      ||||| ||||||||||||||||||||| |||||| || |||||||| |||
seq2  TTTGC-AACATTCAATACCGTTGTCTG-AGATGG-AG-CTGTAAAG-TCT  938

seq1  CTTACAGAATGAGATATTTCCTCAAAGAAACTTCAATAATATCGTATGCC  995
      | ||||| ||||||||||||||| |||||||||||   |||||||||| |
seq2  C-TACAG-ATGAGATATTTCCTC-AAGAAACTTCA--TATATCGTATG-C  982

seq1  TGGAAATGCCACTTTACCGCAGCTATGAAAGCGACTTTCATTCCATTTAG  1045
      ||| |||||||| |||||| ||||||| ||||||| ||||||||||||| 
seq2  TGG-AATGCCAC-TTACCG-AGCTATG-AAGCGAC-TTCATTCCATTTAC  1027

seq1  CTTTGCAAA  1054
       || |||||
seq2  TTTGGCAAA  1036