BAC Information

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BAC

Clone NameB6Ng01-059O04
Chromosome1 (Build37)
Map Location 183,695,116 - 183,821,603
singlet/doubletdoublet
Overlap geneA230079K17Rik, Lbr, EG433384
Upstream geneH3f3a, BC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26, LOC100042363, LOC666519, Cnih3, Ccdc121
Downstream geneEnah, Srp9, EG625823, Degs1, 1700047M11Rik, Fbxo28, LOC435657, ENSMUSG00000073482, Trp53bp2, Capn2, LOC666624, Capn8, 4922505E12Rik, Susd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059O04.bB6Ng01-059O04.g
ACCDH881033DH881034
length523781
definitionDH881033|Mus musculus domesticus DNA, BAC clone: B6Ng01-059O04, 5' end.DH881034|Mus musculus domesticus DNA, BAC clone: B6Ng01-059O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(183,821,075 - 183,821,603)(183,695,116 - 183,695,893)
sequence
tggtgaaccttctgctcataggcagccattgatggaacacagcctgtaag
ccattctattaagtctgtgtgtgtgagtgtgtgtgtagattcattctata
aattgttactctagagaaccctgaccaacacaaaccttaaaattgaaacg
ccccaccagaattataacccataaggcctgccttacagtggtccacttct
tccagtaaggccctacttcctgaaggttccacaacttctcaaaacaacca
gcactaactgggggccaagggttgatacccatgagcctctgggccgtcta
tcctctaaccctaaccctaactgtacagctatagcagcagtatctgaaaa
ggccattgcacgacccatccagaagcagatgaggtcatgtggatagccta
gaagcaacgggtccatcacaggaatctgagctgagttccaagaatagaca
ggtagtcctcaagaagcaatggttcctctacagggagcaacagtttaggg
ggaggcgggggtgtgggggaatg
gaattccatgggaagcagcaagggtgaagaaatgcactcctggctcctgg
gtgaaacataagaggaggaggcaaacggagctcccgtgcaccaagagcag
cccacaaggctgtggcgtcatcaagggtccttatccaggggctcatccag
gtcacccactcatcccacgcacaggggtacatatgcctccctagctttaa
gaaagatagcaagaagacagaacagtaaccagtgcccctaaacacatctg
gtgttttggtctctgaccaggactgaagtgtggttagaaccagggctgtt
tctggtctcttttcaagggcaagaatcaactctgtccaatttttaggtcc
ctgtccctaaactgcctggcaggcaggcttctctaccaggaagccacctc
cccactctgagccaacttcacgaatagctgttggaggtgacattcggcat
cacagaaacacagtttctaggagagaagcccattgggtcctgtgagaccg
ttgcttctttgtgagcaaaaacaggagagtcagagcaactgtggccaact
gataccaagaatggatttcttccacagggtgggaagagggtgctgattta
aaaggcaagacgtgggaacagaactctactctctggccatgccccagcct
cagccttaccttttaaaaatagagtagagcatgcccctgctctagttggt
tgctacataaacaagctaaaacctagaatctcagtccttcacagcttctc
aaagccacccccaaccctctgcccttccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_183821075_183821603
seq2: B6Ng01-059O04.b_46_574 (reverse)

seq1  CATTCCCCCACACCCCCGCCTCCCCCTAAACTGTTGCTCCCTGTAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCCACACCCCCGCCTCCCCCTAAACTGTTGCTCCCTGTAGAGGA  50

seq1  ACCATTGCTTCTTGAGGACTACCTGTCTATTCTTGGAACTCAGCTCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCTTCTTGAGGACTACCTGTCTATTCTTGGAACTCAGCTCAGAT  100

seq1  TCCTGTGATGGACCCGTTGCTTCTAGGCTATCCACATGACCTCATCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGATGGACCCGTTGCTTCTAGGCTATCCACATGACCTCATCTGCT  150

seq1  TCTGGATGGGTCGTGCAATGGCCTTTTCAGATACTGCTGCTATAGCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGGGTCGTGCAATGGCCTTTTCAGATACTGCTGCTATAGCTGTA  200

seq1  CAGTTAGGGTTAGGGTTAGAGGATAGACGGCCCAGAGGCTCATGGGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGGGTTAGGGTTAGAGGATAGACGGCCCAGAGGCTCATGGGTATC  250

seq1  AACCCTTGGCCCCCAGTTAGTGCTGGTTGTTTTGAGAAGTTGTGGAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGGCCCCCAGTTAGTGCTGGTTGTTTTGAGAAGTTGTGGAACCT  300

seq1  TCAGGAAGTAGGGCCTTACTGGAAGAAGTGGACCACTGTAAGGCAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTAGGGCCTTACTGGAAGAAGTGGACCACTGTAAGGCAGGCCT  350

seq1  TATGGGTTATAATTCTGGTGGGGCGTTTCAATTTTAAGGTTTGTGTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTATAATTCTGGTGGGGCGTTTCAATTTTAAGGTTTGTGTTGGT  400

seq1  CAGGGTTCTCTAGAGTAACAATTTATAGAATGAATCTACACACACACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCTCTAGAGTAACAATTTATAGAATGAATCTACACACACACTCA  450

seq1  CACACACAGACTTAATAGAATGGCTTACAGGCTGTGTTCCATCAATGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGACTTAATAGAATGGCTTACAGGCTGTGTTCCATCAATGGCT  500

seq1  GCCTATGAGCAGAAGGTTCACCAGAATTC  529
      |||||||||||||||||||||||||||||
seq2  GCCTATGAGCAGAAGGTTCACCAGAATTC  529

seq1: chr1_183695116_183695893
seq2: B6Ng01-059O04.g_66_845

seq1  GAATTCCATGGGAAGCAGCAAGGGTGAAGAAATGCACTCCTGGCTCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGGAAGCAGCAAGGGTGAAGAAATGCACTCCTGGCTCCTGG  50

seq1  GTGAAACATAAGAGGAGGAGGCAAACGGAGCTCCCGTGCACCAAGAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACATAAGAGGAGGAGGCAAACGGAGCTCCCGTGCACCAAGAGCAG  100

seq1  CCCACAAGGCTGTGGCGTCATCAAGGGTCCTTATCCAGGGGCTCATCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAGGCTGTGGCGTCATCAAGGGTCCTTATCCAGGGGCTCATCCAG  150

seq1  GTCACCCACTCATCCCACGCACAGGGGTACATATGCCTCCCTAGCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCACTCATCCCACGCACAGGGGTACATATGCCTCCCTAGCTTTAA  200

seq1  GAAAGATAGCAAGAAGACAGAACAGTAACCAGTGCCCCTAAACACATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAGCAAGAAGACAGAACAGTAACCAGTGCCCCTAAACACATCTG  250

seq1  GTGTTTTGGTCTCTGACCAGGACTGAAGTGTGGTTAGAACCAGGGCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGGTCTCTGACCAGGACTGAAGTGTGGTTAGAACCAGGGCTGTT  300

seq1  TCTGGTCTCTTTTCAAGGGCAAGAATCAACTCTGTCCAATTTTTAGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTCTTTTCAAGGGCAAGAATCAACTCTGTCCAATTTTTAGGTCC  350

seq1  CTGTCCCTAAACTGCCTGGCAGGCAGGCTTCTCTACCAGGAAGCCACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTAAACTGCCTGGCAGGCAGGCTTCTCTACCAGGAAGCCACCTC  400

seq1  CCCACTCTGAGCCAACTTCACGAATAGCTGTTGGAGGTGACATTCGGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTGAGCCAACTTCACGAATAGCTGTTGGAGGTGACATTCGGCAT  450

seq1  CACAGAAACACAGTTTCTAGGAGAGAAGCCCATTGGGTCCTGTGAGACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAACACAGTTTCTAGGAGAGAAGCCCATTGGGTCCTGTGAGACCG  500

seq1  TTGCTTCTTTGTGAGCAAAAACAGGAGAGTCAGAGCAACTGTGGCCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTTGTGAGCAAAAACAGGAGAGTCAGAGCAACTGTGGCCAACT  550

seq1  GATACCAAGAATGGATTTCTTCCACAGGGTGGGAAGAGGGTGCTGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAAGAATGGATTTCTTCCACAGGGTGGGAAGAGGGTGCTGATTTA  600

seq1  AAAGGCAAGACGTGGGAACAGAACTCTACTCTCTGGCCATGCCCCAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGACGTGGGAACAGAACTCTACTCTCTGGCCATGCCCCAGCCT  650

seq1  CAGCCTTACCTTTTAAAAATAGAGTAGAGCATGCCCCTGCTCTAGTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTACCTTTTAAAAATAGAGTAGAGCATGCCCCTGCTCTAGTTGGT  700

seq1  TGCTACATAAACAAGCTAAAACCTAGAATCTCAGTCC-TCACAGCTTCTC  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTACATAAACAAGCTAAAACCTAGAATCTCAGTCCTTCACAGCTTCTC  750

seq1  AAAGCCACCCCC-ACCCTCTGCCCTCCCCT  778
      |||||||||||| |||||||||||| ||||
seq2  AAAGCCACCCCCAACCCTCTGCCCTTCCCT  780