BAC Information

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BAC

Clone NameB6Ng01-060B07
Chromosome1 (Build37)
Map Location 151,112,833 - 151,224,518
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060B07.bB6Ng01-060B07.g
ACCDH881164DH881165
length1,1811,095
definitionDH881164|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B07, 5' end.DH881165|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,112,833 - 151,114,041)(151,223,406 - 151,224,518)
sequence
gaattcaatatgagactagaagctctccctttaggtctctgatgaaggaa
attctgagccatggagggaatgggattgaaaatgagggatctgaccacct
catagtccagtgacaagggttgagtctgatttagataccatgaggtttgt
ggcttgtatccaagaagaaggaagccttttaacttataaaacttatacat
tttgaattatgtgaacctatttcctataggtactattcaaagattgcatt
aaaattgtgttaaaaaaaaaagcacatctaggtgtttagaaaggcgagtt
aatgtagtgatattggaagtatttaataattaaaattgttttatgtactc
aaaaaaccagaaatgcttatgagaatattcaatatttaaataaatatata
tgtgaatattatcattataaatgcaattaaatttatacatatgaaagcag
aaaatgaatgaaatataagtaatgaaatataagtaatttctcttactgaa
attattaatgaacatttctgtaattttccttttctagtttttttttccct
agaaaaatgatatggagtttctatatagagcatttcccagaggaacattt
aaattcgagtttgctttttgtatgttaattagacatcaacaaagcaatca
gcacttttatgactatgttttctttaaagtataaaatgaaaatttgaaaa
taaagaatatttctcttttaattatatctattttctttcttcaaacatgt
cacctgcaccatatacccttacttttaatctcctgcttgtctctagacac
attcaagtctgagttttcatcactctttccaccgtggttatgctcaatga
tcaacaaaatatcaccaaatcccatgaatttttagcatttttcacttgct
tgcgtcttcttgttaagatgtggatttcatacagttcatgctgtcacctt
tatgatatttctcatgtgtgtctggacctttcggtgtcatcatccactct
tttgttaaacttaaatggtacaagtaaatggcgtttgatagactgttctg
tcgtaaaacacaaatgcctagattgtgaattgtcttccaagctcagtgac
tgtaatcacgggtgaattcccaatcctgactgctgaactgtgacaatgta
tctggttattggtacagtccagggcactggg
gaattcttctgcaaatgatttttcccatttctattgtgttgggtttcttt
gaaactttttcttttgctccagtattttagttgctgaaacaattatgcag
acattgacttaactaagcacttgggataatgagaaacattcatttgaaat
gcaggtgcacttctctgagtcaaagcctcacattaacactcaaaagtatt
gttcacagaacatgacttgtttttacaatctctggacagagaactctttc
catgtaatcaacaataattttgtgcaagttggaaagacaatagaagttct
aagattaatataatgattttaattccaattcatacaacttgaagctccag
aataattcatctatctttttactgaaataaattcttcttttcatgaggta
gtttttatttatttagattactggtatgtgatattacaaaataataaata
ttataatgagaaaaatgttttgttaatgtacactagtaagcaatacacct
aaaacttacaagaattaaaaaacgttgactaaagaatcaaacatgcaatt
ctttggtatctcgattgatccatctatagtgatgttatccctaacgttaa
ttttaaaattttttgaaatatagcttgtttatcgagtgaatacctcattt
tcaaattcccttgaaaattcagtggcttgcctggcaccaaacactatgta
acctttaggtatgttatatttggcatttggagtctatatttttaattatt
gttccattgttttcaaacaattctttatacttacaaactatataagtgtt
ccttatgaaatgtaatatataatgatatttactatatttagtaaacatat
ttctaatatggtcacaaatttggggtgctcaaattttctttgttatttaa
actttgttttctttgtaaatttataaaaattcaaaactttgtagttgatg
agctcttgaacttgtgttagaaatgagccctagctaactgaaagtatatt
tagcagatatcactttgttgtctccatgtgcctatagccactaggttatg
gacagttctgtctgattcctgtctaatacagtaatttgggtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151112833_151114041
seq2: B6Ng01-060B07.b_45_1225

seq1  GAATTCAATATGAGACTAGAAGCTCTCCCTTTAGGTCTCTGATGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGAGACTAGAAGCTCTCCCTTTAGGTCTCTGATGAAGGAA  50

seq1  ATTCTGAGCCATGGAGGGAATGGGATTGAAAATGAGGGATCTGACCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGCCATGGAGGGAATGGGATTGAAAATGAGGGATCTGACCACCT  100

seq1  CATAGTCCAGTGACAAGGGTTGAGTCTGATTTAGATACCATGAGGTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCCAGTGACAAGGGTTGAGTCTGATTTAGATACCATGAGGTTTGT  150

seq1  GGCTTGTATCCAAGAAGAAGGAAGCCTTTTAACTTATAAAACTTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTATCCAAGAAGAAGGAAGCCTTTTAACTTATAAAACTTATACAT  200

seq1  TTTGAATTATGTGAACCTATTTCCTATAGGTACTATTCAAAGATTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTATGTGAACCTATTTCCTATAGGTACTATTCAAAGATTGCATT  250

seq1  AAAATTGTGTTAAAAAAAAAAGCACATCTAGGTGTTTAGAAAGGCGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTGTTAAAAAAAAAAGCACATCTAGGTGTTTAGAAAGGCGAGTT  300

seq1  AATGTAGTGATATTGGAAGTATTTAATAATTAAAATTGTTTTATGTACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTGATATTGGAAGTATTTAATAATTAAAATTGTTTTATGTACTC  350

seq1  AAAAAACCAGAAATGCTTATGAGAATATTCAATATTTAAATAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAGAAATGCTTATGAGAATATTCAATATTTAAATAAATATATA  400

seq1  TGTGAATATTATCATTATAAATGCAATTAAATTTATACATATGAAAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATATTATCATTATAAATGCAATTAAATTTATACATATGAAAGCAG  450

seq1  AAAATGAATGAAATATAAGTAATGAAATATAAGTAATTTCTCTTACTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATGAAATATAAGTAATGAAATATAAGTAATTTCTCTTACTGAA  500

seq1  ATTATTAATGAACATTTCTGTAATTTTCCTTTTCTAGTTTTTTTTTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATGAACATTTCTGTAATTTTCCTTTTCTAGTTTTTTTTTCCCT  550

seq1  AGAAAAATGATATGGAGTTTCTATATAGAGCATTTCCCAGAGGAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGATATGGAGTTTCTATATAGAGCATTTCCCAGAGGAACATTT  600

seq1  AAATTCGAGTTTGCTTTTTGTATGTTAATTAGACATCAACAAAGCAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCGAGTTTGCTTTTTGTATGTTAATTAGACATCAACAAAGCAATCA  650

seq1  GCACTTTTATGACTATGTTTTCTTTAAAGTATAAAATGAAAATTTGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTATGACTATGTTTTCTTTAAAGTATAAAATGAAAATTTGAAAA  700

seq1  TAAAGAATATTTCTCTTTTAATTATATCTATTTTCTTTCTTCAAACATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATTTCTCTTTTAATTATATCTATTTTCTTTCTTCAAACATGT  750

seq1  CACCTGCACCATATACCCTTACTTTTAATCTCCTGCTTGTCTCTAGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCACCATATACCCTTACTTTTAATCTCCTGCTTGTCTCTAGACAC  800

seq1  ATTCAAGTCTGAGTTTTCATCACTCTTTCCACCGTGGTTATGCTCAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTCTGAGTTTTCATCACTCTTTCCACCGTGGTTATGCTCAATGA  850

seq1  TCAACAAAATATCACCAAATCCCATGAATTTTTAGCATTTTTCACTTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAAATATCACCAAATCCCATGAATTTTTAGCATTTTTCACTTGCT  900

seq1  TGCGTCTTCTTGTTAAGATGTGGATTTCATACAAGTTCCATGCTGTCACC  950
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  TGCGTCTTCTTGTTAAGATGTGGATTTCATAC-AGTT-CATGCTGTCACC  948

seq1  TTTATGATATTTCTCATGTGTGTCTGGACCTTTTCGGTTGTCAATCATCC  1000
      |||||||||||||||||||||||||||||| |||||| |||| |||||||
seq2  TTTATGATATTTCTCATGTGTGTCTGGACC-TTTCGG-TGTC-ATCATCC  995

seq1  AACTCTTTCTGTCTAAACTTAAAATGGTACAAAGTTAAATGGCGTTTGAT  1050
       ||||||| ||| ||||||| |||||||||||   |||||||||||||||
seq2  -ACTCTTT-TGT-TAAACTT-AAATGGTACAA--GTAAATGGCGTTTGAT  1039

seq1  AGACTGTTCTGTCGTAAAACACAAATGCTTAGATTGTGGTATCTGTCTCC  1100
      |||||||||||||||||||||||||||| |||||||||  |  ||||| |
seq2  AGACTGTTCTGTCGTAAAACACAAATGCCTAGATTGTG--AATTGTCTTC  1087

seq1  CAGAGCTCAGTGACTGTAATCAGCGTGTGAATTCCCAAATTCCTGACTTG  1150
      || ||||||||||||||||||| || ||||||||||||  ||||||| ||
seq2  CA-AGCTCAGTGACTGTAATCA-CGGGTGAATTCCCAA--TCCTGAC-TG  1132

seq1  CTTGATCTTGTGGACACATGTATCTGTGTATCTGAGTATCAGCTCCAAAG  1200
      | ||| | ||| |||| |||||||||  ||| || ||| ||| |||  ||
seq2  C-TGAAC-TGT-GACA-ATGTATCTGGTTAT-TG-GTA-CAG-TCC--AG  1172

seq1  GGCACTGGG  1209
      |||||||||
seq2  GGCACTGGG  1181

seq1: chr1_151223406_151224518
seq2: B6Ng01-060B07.g_68_1162 (reverse)

seq1  TCAGACCCAAATATACCCTTGTATTAGTACCAAGGGATCAAGACAGACTT  50
      |||||||||||| |||   |||||||| ||  ||| ||| |||||||  |
seq2  TCAGACCCAAAT-TAC---TGTATTAG-AC--AGGAATC-AGACAGAACT  42

seq1  GTCCATTAAACCTAGT-GCTATAGCCACATGGAGACAACAAAGTTGATTA  99
      ||||||  |||||||| ||||||| |||||||||||||||||| ||| ||
seq2  GTCCAT--AACCTAGTGGCTATAGGCACATGGAGACAACAAAG-TGA-TA  88

seq1  TCTGCTAAATTATACTTTCAGTTTAGCTAGTGCTCATTTTCTTAACACAA  149
      ||||||||| ||||||||||| |||||||| ||||||||   ||||||||
seq2  TCTGCTAAA-TATACTTTCAG-TTAGCTAGGGCTCATTT--CTAACACAA  134

seq1  GTTCAAGAGCTTCATCAACTACAAAGTTTTGAATTTTTATAAAATTTACA  199
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  GTTCAAGAGC-TCATCAACTACAAAGTTTTGAATTTTTAT-AAATTTACA  182

seq1  AAGAAAACAAAGTTTAAAATAACAAAGAAAATTTGAGCACCCCAAATTTG  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAAAGTTT-AAATAACAAAGAAAATTTGAGCACCCCAAATTTG  231

seq1  TGACCATATTAGAAATATGTTTACTAAATATAGTAAATATCATTATATAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATATTAGAAATATGTTTACTAAATATAGTAAATATCATTATATAT  281

seq1  TACATTTCATAAGGAACACTTATATAGTTTGTAAGTATAAAGAATTGTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCATAAGGAACACTTATATAGTTTGTAAGTATAAAGAATTGTTT  331

seq1  GAAAACAATGGAACAATAATTAAAAATATAGACTCCAAATGCCAAATATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAATGGAACAATAATTAAAAATATAGACTCCAAATGCCAAATATA  381

seq1  ACATACCTAAAGGTTACATAGTGTTTGGTGCCAGGCAAGCCACTGAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTAAAGGTTACATAGTGTTTGGTGCCAGGCAAGCCACTGAATTT  431

seq1  TCAAGGGAATTTGAAAATGAGGTATTCACTCGATAAACAAGCTATATTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAATTTGAAAATGAGGTATTCACTCGATAAACAAGCTATATTTC  481

seq1  AAAAAATTTTAAAATTAACGTTAGGGATAACATCACTATAGATGGATCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTTAAAATTAACGTTAGGGATAACATCACTATAGATGGATCAA  531

seq1  TCGAGATACCAAAGAATTGCATGTTTGATTCTTTAGTCAACGTTTTTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGATACCAAAGAATTGCATGTTTGATTCTTTAGTCAACGTTTTTTAA  581

seq1  TTCTTGTAAGTTTTAGGTGTATTGCTTACTAGTGTACATTAACAAAACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTAAGTTTTAGGTGTATTGCTTACTAGTGTACATTAACAAAACAT  631

seq1  TTTTCTCATTATAATATTTATTATTTTGTAATATCACATACCAGTAATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCATTATAATATTTATTATTTTGTAATATCACATACCAGTAATCT  681

seq1  AAATAAATAAAAACTACCTCATGAAAAGAAGAATTTATTTCAGTAAAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAAAACTACCTCATGAAAAGAAGAATTTATTTCAGTAAAAAG  731

seq1  ATAGATGAATTATTCTGGAGCTTCAAGTTGTATGAATTGGAATTAAAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAATTATTCTGGAGCTTCAAGTTGTATGAATTGGAATTAAAATC  781

seq1  ATTATATTAATCTTAGAACTTCTATTGTCTTTCCAACTTGCACAAAATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAATCTTAGAACTTCTATTGTCTTTCCAACTTGCACAAAATTA  831

seq1  TTGTTGATTACATGGAAAGAGTTCTCTGTCCAGAGATTGTAAAAACAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATTACATGGAAAGAGTTCTCTGTCCAGAGATTGTAAAAACAAGT  881

seq1  CATGTTCTGTGAACAATACTTTTGAGTGTTAATGTGAGGCTTTGACTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTGTGAACAATACTTTTGAGTGTTAATGTGAGGCTTTGACTCAG  931

seq1  AGAAGTGCACCTGCATTTCAAATGAATGTTTCTCATTATCCCAAGTGCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGCACCTGCATTTCAAATGAATGTTTCTCATTATCCCAAGTGCTT  981

seq1  AGTTAAGTCAATGTCTGCATAATTGTTTCAGCAACTAAAATACTGGAGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTCAATGTCTGCATAATTGTTTCAGCAACTAAAATACTGGAGCA  1031

seq1  AAAGAAAAAGTTTCAAAGAAACCCAACACAATAGAAATGGGAAAAATCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAGTTTCAAAGAAACCCAACACAATAGAAATGGGAAAAATCAT  1081

seq1  TTGCAGAAGAATTC  1113
      ||||||||||||||
seq2  TTGCAGAAGAATTC  1095