BAC Information

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BAC

Clone NameB6Ng01-061M16
Chromosome1 (Build37)
Map Location 95,055,930 - 95,056,614
singlet/doubletsinglet
Overlap gene2310007B03Rik
Upstream geneLOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos, Gpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt
Downstream geneE030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25, Bok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061M16.bB6Ng01-061M16.g
ACCDH882374DH882375
length1,284355
definitionDH882374|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M16, 5' end.DH882375|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgcccatacctaaacatgataaaaacaatctacagcaaacca
gtagccagcatcaaagtaaatggtgaaaagcttgtaccaatccgactaaa
atcagggactagacaaggctgtccactctctccctacctattcaacattg
tacttgaaatcctagccagagcaatgagacaacaaaaggagatcaaggtg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gataatatgtatacgtgaccctaaaaattccaccagagaactcctaagcc
tgataaacagcttcagtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctcttcacaaaggacaaacaggctgaggaagaaattag
ggaaacaacacccttctcaatagccatatataatataaaatacctaggca
tgactctaaggaagtaaaagatctgtatgacaagaacttcatgcctctga
agaaagaaattaaagaagatctcagaagatggaaaggtctcgcatgctca
tggattggcaggatcaatatagtaaaaatggctatcttgccaaatcaatc
tacagattcaatgcaatccccatcaaaattccaactcatttcgtcaacaa
attagaaagagaaatcagcagattcatctgaaataacaaaaaacctagga
tagcaaaaactcttctcaaggataaaagaacatctagtgcaatcacaatg
cccaacctaaagctgtactacagagcaattgtgataaaaactgcatggaa
ctggtatagtgacagacaagtagaccaatggaacagaattgaagacccaa
agaaaaacccacacacctatggtcacttgatctttgacaagcaatctaaa
accatccagtggaaaaagacagcattttcaacaaatggtactggcacaac
tggctgttatcatgttgaagattgcgaattgatccagtcctatcttcttg
tactaaggtcaaatctaattggaataagacttccacataaatcagaaatc
tctgatcctaatagaggagaaagtaggaaaagcttggaggatatgttaca
gggaaaatctgaataggaacagcatggcctgtgtctgttagatcgagaat
cgataatgggacttttaaattgcaagctttgcaggccaagaagctcattg
taaaaaaagacacacaagtggaagacttaccatcatgctaggcataatcc
aatattaaggacatcagagggaaactctcattac
caagcccaggatccgctcaaggactacctagaatattggtgaaggacagg
gaacaaagttggatattgcttagatatttgccaagtcattacttggaggc
acttataataaaacaacattgaaagaagtcacaaagattcaatcacttac
taatgtaaggacaagtttgatgcattttttccaggatggttcctgaagac
ttagtttccatgaactttttgactagggactgtgtctaaatatttagaac
tgtcacgggagtcactactggggtttgtgttccaatggctggtgtgcgtt
tgtgtgtgtgtgtgggggtgtgtgagtgcatgtgtgtttgtgtgtgtgtg
tgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_95055930_95056614
seq2: B6Ng01-061M16.g_328_431 (reverse)

seq1  CCCCACACACACACACATGCACACGCACATGCACACGCACACGCACACGA  50
      |||||||||||||||    || || ||||||||| | ||||| | |||  
seq2  CCCCACACACACACA----CAAACACACATGCACTCACACACCCCCACAC  46

seq1  ACACAATGATAACTCACACTTCATTCATATGCACAGGGAAGACACATACC  100
      |||||   | ||| |||||  ||  |||        |||  ||||| |||
seq2  ACACACACA-AACGCACAC--CAGCCAT-------TGGA--ACACAAACC  84

seq1  C----AGGGA---CCTGGATGCAGCCCACAGGGGTCAGTCCATACCCTCA  143
      |    || ||   ||  ||                               
seq2  CCAGTAGTGACTCCCGTGAC------------------------------  104

seq1  GCACTCAAACACAGCAGTCACACATATGTACAGACACAGTTGCTCACTTG  193
                                                        
seq2  --------------------------------------------------  104

seq1  TGTCCAGTACCTCCCCACCCCCCACCCCACCCCACCCCCACACACACACT  243
                                                        
seq2  --------------------------------------------------  104

seq1  GTTACCTGGTGGAATGAGCCTGTGGTGCTTGCAATGTACAATGGCAGCCA  293
                                                        
seq2  --------------------------------------------------  104

seq1  CCAGAAGATCTTTGAGGACACACAGGACTTTACTGGGTACAAGGTGGCCA  343
                                                        
seq2  --------------------------------------------------  104

seq1  CAGCACTTGTCTCTGTCCTCTGAGGAGACACTGAAGATGTCAGCAGTCAT  393
                                                        
seq2  --------------------------------------------------  104

seq1  CCATGGCTCCAGGCCAGATGCCTCCTTGAGGACACCCAGGCGACAGATTG  443
                                                        
seq2  --------------------------------------------------  104

seq1  CAGGGCCATCCCCTGGCTCAGTGGCTTCTGACTCCTCGATCAGGAGAGCC  493
                                                        
seq2  --------------------------------------------------  104

seq1  TCCGAATCCACCCCCAGGAGCACCTCCACATCCAGTGGGTCCTCTGAGGA  543
                                                        
seq2  --------------------------------------------------  104

seq1  ACGCAGGGCAAACTGGAAGGCCTCCAGGTCTCTAGAATAGTCAACAATGA  593
                                                        
seq2  --------------------------------------------------  104

seq1  AGCGGGAGTCCAAGGCATGGACGCGTTCCAGCACCGTAAGCAAGATATTC  643
                                                        
seq2  --------------------------------------------------  104

seq1  TCCGCTCTCTGGTAGTCCTGGACACGGGGTGACTCCCGTGAC  685
                                                
seq2  ------------------------------------------  104