BAC Information

Click to search

BAC

Clone NameB6Ng01-062N07
Chromosome1 (Build37)12 (Build37)
Map Location 105,387,058 - 105,388,16721,464,931 - 21,464,995
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041056, LOC100041067
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062N07.bB6Ng01-062N07.g
ACCDH883102DH883103
length1,089406
definitionDH883102|Mus musculus domesticus DNA, BAC clone: B6Ng01-062N07, 5' end.DH883103|Mus musculus domesticus DNA, BAC clone: B6Ng01-062N07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(105,387,058 - 105,388,167)(21,464,931 - 21,464,995)
sequence
gaattctaaaatatctgggactgcatagtgagatcctgttaattatgtat
ttatagataaaaggaactgttaaacttttgttggttcagatcctaggaaa
gacaggaatttgttttcagttgtgcaccctttaggaagtcaataggttcc
agtggataattccatacccatggccattacaccttttagaacacaaaatg
aaacaaaacaaaacaaaacacatgggttttagagggtgtgtaagaagaaa
gggaggctgacagtgctagaaggaagacaagagagggcaatatgaaagaa
caaaaggaatgcattatatacaagtatgaaatgttaaaaatattaattaa
agggttaaaatctaagagaaaatatttcaagttgaaaatcctataccata
ttcaattaataatgaactgtatggcttctggtttgcaactctaccctggg
cagatatggtgcttctgacccactcccacacaccagaacctctctgtctt
ccaagatgtctactgtaactagaacataccattcctgtcccacaggacat
ttgccataccagggacacaggagacctgttctaaccatgaaaacaagata
ccctaatatccagagacagcactgtctacttctaaagaggccttctgtaa
cccaagtcacagaattcaacctgcatccaagtagggataggctggagtca
tagacaaccaagacattttataccagaaataaccagatggtgaaaggcaa
atgcaagaggataagtaacagaagctaatataacttggaacaataagaac
ccaattattacacagcagcaagccttggacaccctaacacacatgaaaag
caagaatctttcttaaactcccaatttataaagattatagaaacctttaa
aaagggatagaaataactctcttaaagaaacatggggaaacacaggcaaa
cagaagcactaaaagaagaaaaacaaaccttaaaaaaaattcagaaacac
ataaatctgatgaaggattgaacaaagtgtctagactaaaatgtgataga
aaattaaaaaaattcacaatgcaattcagaagtgatcag
catctggttcccagctcgaaccatctagggactaacactcagggtgctgg
atagtactcagcctgttactagagaataatgacatcatcaatttcttctc
acagaaagtgtgatagcatgtataatacctacacatgttcaaaacagatc
aaacctcagcagtgagaagggaaagtgcacatcaagtctcagtggtaaaa
acaaaaagctatttacaactgaaaaattgtaggaaagggaaaaacaattt
tattcaagggattgtcactgggtataccaaccacattccagggcagaatc
catgtttactttagttcaccaagacaaaactgactccagtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_105387058_105388167
seq2: B6Ng01-062N07.b_43_1131 (reverse)

seq1  CTGATCACTTTCCTGGATTTTGCATTTGTGATTTTTTTTTTAATTTTTCT  50
      ||||||||||  ||| |  ||||| |||||| |||||||   | ||||||
seq2  CTGATCACTT--CTGAA--TTGCA-TTGTGAATTTTTTT---AATTTTCT  42

seq1  ATCACCATTTTTAGGTCTTAGACACTTTTGTTCAATTCCTTCATCAGATT  100
      |||| ||||||   ||| ||||||| ||||||||| ||||||||||||||
seq2  ATCA-CATTTT--AGTC-TAGACAC-TTTGTTCAA-TCCTTCATCAGATT  86

seq1  TATTGTGTTTTCCTGAATTTTTTTTTAAGGTTTTGTTTATTTCTTCTTTT  150
      || |||||||  ||||| |||||||||||| ||||||  |||||||||||
seq2  TA-TGTGTTT--CTGAA-TTTTTTTTAAGG-TTTGTT--TTTCTTCTTTT  129

seq1  AGTGCTTCTGTTTGCCTGTGTTTCCCCATGTTTCTTTAAGGGAGTTATTT  200
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTGCTTCTGTTTGCCTGTGTTTCCCCATGTTTCTTTAAGAGAGTTATTT  179

seq1  CTATCCCTTTTTAAAGGTTTCTATAATCTTTATAAATTGGGAGTTTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCTTTTTAAAGGTTTCTATAATCTTTATAAATTGGGAGTTTAAGA  229

seq1  AAGATTCTTGCTTTTCATGTGTGTTAGGGTGTCCAAGGCTTGCTGCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTTGCTTTTCATGTGTGTTAGGGTGTCCAAGGCTTGCTGCTGTG  279

seq1  TAATAATTGGGTTCTTATTGTTCCAAGTTATATTAGCTTCTGTTACTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTGGGTTCTTATTGTTCCAAGTTATATTAGCTTCTGTTACTTAT  329

seq1  CCTCTTGCATTTGCCTTTCACCATCTGGTTATTTCTGGTATAAAATGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCATTTGCCTTTCACCATCTGGTTATTTCTGGTATAAAATGTCT  379

seq1  TGGTTGTCTATGACTCCAGCCTATCCCTACTTGGATGCAGGTTGAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTCTATGACTCCAGCCTATCCCTACTTGGATGCAGGTTGAATTCT  429

seq1  GTGACTTGGGTTACAGAAGGCCTCTTTAGAAGTAGACAGTGCTGTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTGGGTTACAGAAGGCCTCTTTAGAAGTAGACAGTGCTGTCTCTG  479

seq1  GATATTAGGGTATCTTGTTTTCATGGTTAGAACAGGTCTCCTGTGTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGGGTATCTTGTTTTCATGGTTAGAACAGGTCTCCTGTGTCCCT  529

seq1  GGTATGGCAAATGTCCTGTGGGACAGGAATGGTATGTTCTAGTTACAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGCAAATGTCCTGTGGGACAGGAATGGTATGTTCTAGTTACAGTA  579

seq1  GACATCTTGGAAGACAGAGAGGTTCTGGTGTGTGGGAGTGGGTCAGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTGGAAGACAGAGAGGTTCTGGTGTGTGGGAGTGGGTCAGAAGC  629

seq1  ACCATATCTGCCCAGGGTAGAGTTGCAAACCAGAAGCCATACAGTTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCTGCCCAGGGTAGAGTTGCAAACCAGAAGCCATACAGTTCATT  679

seq1  ATTAATTGAATATGGTATAGGATTTTCAACTTGAAATATTTTCTCTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGAATATGGTATAGGATTTTCAACTTGAAATATTTTCTCTTAGA  729

seq1  TTTTAACCCTTTAATTAATATTTTTAACATTTCATACTTGTATATAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCCTTTAATTAATATTTTTAACATTTCATACTTGTATATAATGC  779

seq1  ATTCCTTTTGTTCTTTCATATTGCCCTCTCTTGTCTTCCTTCTAGCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTTGTTCTTTCATATTGCCCTCTCTTGTCTTCCTTCTAGCACTG  829

seq1  TCAGCCTCCCTTTCTTCTTACACACCCTCTAAAACCCATGTGTTTTGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCCCTTTCTTCTTACACACCCTCTAAAACCCATGTGTTTTGTTT  879

seq1  TGTTTTGTTTCATTTTGTGTTCTAAAAGGTGTAATGGCCATGGGTATGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTCATTTTGTGTTCTAAAAGGTGTAATGGCCATGGGTATGGA  929

seq1  ATTATCCACTGGAACCTATTGACTTCCTAAAGGGTGCACAACTGAAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCACTGGAACCTATTGACTTCCTAAAGGGTGCACAACTGAAAACA  979

seq1  AATTCCTGTCTTTCCTAGGATCTGAACCAACAAAAGTTTAACAGTTCCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGTCTTTCCTAGGATCTGAACCAACAAAAGTTTAACAGTTCCTT  1029

seq1  TTATCTATAAATACATAATTAACAGGATCTCACTATGCAGTCCCAGATAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATAAATACATAATTAACAGGATCTCACTATGCAGTCCCAGATAT  1079

seq1  TTTAGAATTC  1110
      ||||||||||
seq2  TTTAGAATTC  1089

seq1: chr12_21464931_21464995
seq2: B6Ng01-062N07.g_415_479 (reverse)

seq1  CCACACACACACACACACACACACACACACACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACACACACACACACACACACACACACACACACACACACACAC  50

seq1  ACACACACACACACA  65
      |||||||||||||||
seq2  ACACACACACACACA  65