BAC Information

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BAC

Clone NameB6Ng01-063E07
Chromosome1 (Build37)
Map Location 25,752,467 - 25,883,719
singlet/doubletdoublet
Overlap geneBai3
Upstream geneLmbrd1, 4930472D16Rik, LOC669171, LOC665595
Downstream gene4931408C20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063E07.bB6Ng01-063E07.g
ACCDH883413DH883414
length901966
definitionDH883413|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E07, 5' end.DH883414|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,882,814 - 25,883,719)(25,752,467 - 25,753,345)
sequence
gaattcttgagacagctggcacaaatattgaaagggttttgttttttcaa
tgcctgtggtcgtctgcttgcgtctcacttcctttgccattcttacaggc
caaatgacataggatgaaggctgttcgtaacctgctgatttatatatttt
ccacctatctcctggttatgtttggatttaatgctgcccaaaacttctgg
tgttccactttggagaagggagtcatttatggatcctattctgtaactga
aatgtttcccaaaaactttacaaactgcacctggacactggaaaatccag
atccaaccaaatatagcatttacctgaaattttccaaaaaggaccttagc
tgctctaacttttcccttctggcttatcagtttgatcatttttcccatga
aaaaataaaggatcttttgagaaagaaccattccataatgcaactttgca
gttccaagaatgcttttgtttttctacagtacgataaaaatttcattcaa
atacgccgggtatttccaactgatttcccaggattacagaaaaaagtcga
agaggatcagaaatctttttttgagtttttggtactgaacaaggtgagcc
cgagccagtttggttgccatgtcttatgcacttggttggaaagctgctta
aaatccgaaaatgggagaaccgagtcttgtggaattatgtacacaaaatg
cacgtgcccccagcacttgggagagtggggaatagatgaccagtccctgg
ttctgttaaataacgtcgtgttacccctgaatgagcagacggagggttgc
tgactcaggagctgcaactactcaagtctgcatctgaccatgagcccata
gaccacccaagaatgaagtgctcagagcatgggagtggggctagcgctgg
g
gaattctgtacctctctgagaaggtgcggttgtgccccatattaataata
acagttccttttgcttgaagtatttgattaacttggatgaatacgatagg
acatggtacatcccaagcttattttcttttttttaaggacaagattgccc
gaggctcaaacattgctcaaaaagatcttattccttctcattgattattg
gtgctggttttcttcgtgatcattaacatcaaattacttctgaatacatc
ctccaatctgagctcatgttcccccattaaaagtgtctggcaatggtgac
tgggtttccgaagaaacaaggctgcttcggatcccagaatgaggcatctg
gaggtatggacactccatgttacctacgcggcatcatataagggcagcat
gtgattttattaagtactataggtagcagtgcatgagcagaattctatgg
actcaaacagactaaatgatttgtagatggagaaagaaaaaaaggaaatt
actgcatctgtttgagcctcttgttgttacattatctccactgtgacttt
cgttaatttctttaatagtagatgctatccacatattataaatcgatgag
ggatctctgcttggctatgtgcctgccaatcagcccctagttacaagccc
tgaagctcctgaagaatggttgctataattgttaccaatgtctgttttcc
tcatcttcatttgagacaaaaaacagagcctctgatttgcacctgcattg
ctctctgggaaacttaattagaaataagatcatacattttggttacgtcc
agaccagaaatgccttctttggtccccagatggcagttctgtatcaacac
agggatggacgtggagaaggtgggggggcatacagtgtatagatgctaca
gtcagggttatacagaaaggagtaaagctgacccccagtagtttctctat
aggtgccataccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_25882814_25883719
seq2: B6Ng01-063E07.b_42_942 (reverse)

seq1  CCCAGC-----CCCCACTCCCCCTGCCTCTGAGCACTTACCTTCTTTGGG  45
      ||||||     ||||||| ||| || |||||||||||| | ||| |||||
seq2  CCCAGCGCTAGCCCCACT-CCCATG-CTCTGAGCACTT-CATTC-TTGGG  46

seq1  TGGTCTCTTGGCCTCCCTGGTCAGATTGCAGACTTGAGTAGTTTGCAGCT  95
      |||||| | |||   | |||||||| ||||||||||||||| ||||||||
seq2  TGGTCTATGGGC--TCATGGTCAGA-TGCAGACTTGAGTAG-TTGCAGCT  92

seq1  CCTGAGTCAGGCAACCCTCCGTCTGCTCATTCAGGGGTAACACGACGTTA  145
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCA-GCAACCCTCCGTCTGCTCATTCAGGGGTAACACGACGTTA  141

seq1  TTTAACAGAACCAGGGACTGGTCATCTATTCCCCACTCTCCCAAGTGCTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGAACCAGGGACTGGTCATCTATTCCCCACTCTCCCAAGTGCTG  191

seq1  GGGGCACGTGCATTTTGTGTACATAATTCCACAAGACTCGGTTCTCCCAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACGTGCATTTTGTGTACATAATTCCACAAGACTCGGTTCTCCCAT  241

seq1  TTTCGGATTTTAAGCAGCTTTCCAACCAAGTGCATAAGACATGGCAACCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGATTTTAAGCAGCTTTCCAACCAAGTGCATAAGACATGGCAACCA  291

seq1  AACTGGCTCGGGCTCACCTTGTTCAGTACCAAAAACTCAAAAAAAGATTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTCGGGCTCACCTTGTTCAGTACCAAAAACTCAAAAAAAGATTT  341

seq1  CTGATCCTCTTCGACTTTTTTCTGTAATCCTGGGAAATCAGTTGGAAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTCTTCGACTTTTTTCTGTAATCCTGGGAAATCAGTTGGAAATA  391

seq1  CCCGGCGTATCTGAATGAAATTTTTATCGTACTGTAGAAAAACAAAAGCA  445
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCGTATTTGAATGAAATTTTTATCGTACTGTAGAAAAACAAAAGCA  441

seq1  TTCTTGGAACTGCAAAGTTGCATTATGGAATGGTTCTTTCTCAAAAGATC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGAACTGCAAAGTTGCATTATGGAATGGTTCTTTCTCAAAAGATC  491

seq1  CTTTATTTTTTCATGGGAAAAATGATCAAACTGATAAGCCAGAAGGGAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTTTCATGGGAAAAATGATCAAACTGATAAGCCAGAAGGGAAA  541

seq1  AGTTAGAGCAGCTAAGGTCCTTTTTGGAAAATTTCAGGTAAATGCTATAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAGCAGCTAAGGTCCTTTTTGGAAAATTTCAGGTAAATGCTATAT  591

seq1  TTGGTTGGATCTGGATTTTCCAGTGTCCAGGTGCAGTTTGTAAAGTTTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGATCTGGATTTTCCAGTGTCCAGGTGCAGTTTGTAAAGTTTTT  641

seq1  GGGAAACATTTCACTTACAGAATAGGATCCATAAATGACTCCCTTCACCA  695
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  GGGAAACATTTCAGTTACAGAATAGGATCCATAAATGACTCCCTTCTCCA  691

seq1  AAGTGGAACACCAGAAGTCTTGGGCAGCATTAAATCCAAACATAACCAGG  745
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGTGGAACACCAGAAGTTTTGGGCAGCATTAAATCCAAACATAACCAGG  741

seq1  AGATAGGTGGAAAATATATAAATCAGCAGGTTACGAACAGCCTTCATCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGTGGAAAATATATAAATCAGCAGGTTACGAACAGCCTTCATCCT  791

seq1  ATGTCATTTGGCCTGTAAGAATGGCAAAGGAAGTGAGACGCAAGCAGACG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTGGCCTGTAAGAATGGCAAAGGAAGTGAGACGCAAGCAGACG  841

seq1  ACCACAGGCATTGAAAAAACAAAACCCTTTCAATATTTCTGCCAGCTGTT  895
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  ACCACAGGCATTGAAAAAACAAAACCCTTTCAATATTTGTGCCAGCTG-T  890

seq1  TTCAAGAATTC  906
       ||||||||||
seq2  CTCAAGAATTC  901

seq1: chr1_25752467_25753345
seq2: B6Ng01-063E07.g_66_943

seq1  GAATTCTGTACATCTCTGAGAAGTTGCAGTTGTGCCCCATATTAATAATA  50
      ||||||||||| ||||||||||| ||| ||||||||||||||||||||||
seq2  GAATTCTGTACCTCTCTGAGAAGGTGCGGTTGTGCCCCATATTAATAATA  50

seq1  ACAGTTCCTTTTGCTTGAAGTATTTGATTAACTTGGATGAATACGATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCTTTTGCTTGAAGTATTTGATTAACTTGGATGAATACGATAGG  100

seq1  ACATGGTACATCAGAAGCTTATTTTCTTTTTTTTAAGGACAAGATTGCCC  150
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  ACATGGTACATCCCAAGCTTATTTTCTTTTTTTTAAGGACAAGATTGCCC  150

seq1  GAGGCACAAACATTGCTCAAAAAGATCTTATTCCTTCTCATTGATTATTG  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAAACATTGCTCAAAAAGATCTTATTCCTTCTCATTGATTATTG  200

seq1  GTGCTGGTTTTCTTCATGATCAGTAACATCAAATTACTTCTGAATACATC  250
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  GTGCTGGTTTTCTTCGTGATCATTAACATCAAATTACTTCTGAATACATC  250

seq1  CTCCAATCTGAGCTCATGTTCCCCCATTAAAAGTGTCTGGCAATGGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCTGAGCTCATGTTCCCCCATTAAAAGTGTCTGGCAATGGTGAC  300

seq1  AGGGTTTCCGAGGAAACAAGGCTGCAGCGGAGCCCAGAATGAGGCATCTG  350
       |||||||||| |||||||||||||  |||| ||||||||||||||||||
seq2  TGGGTTTCCGAAGAAACAAGGCTGCTTCGGATCCCAGAATGAGGCATCTG  350

seq1  GAGGTATGGACACTCCATGTTACCTAGGCAGCATCATATAAGGGCAGCAT  400
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  GAGGTATGGACACTCCATGTTACCTACGCGGCATCATATAAGGGCAGCAT  400

seq1  GTGATTTTATTAAGTACTATAGGTAGCAGTGCATGAGCAGAATTCTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTATTAAGTACTATAGGTAGCAGTGCATGAGCAGAATTCTATGG  450

seq1  ACTCAGACAGACTAAATGATTTGTAGATGGAGAAAGAAAAAAAGGAAATT  500
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAACAGACTAAATGATTTGTAGATGGAGAAAGAAAAAAAGGAAATT  500

seq1  ACTGCATCTGTTTGAGCCTCTTGTTGTTACATTAGCTCCACTGTGATTTT  550
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  ACTGCATCTGTTTGAGCCTCTTGTTGTTACATTATCTCCACTGTGACTTT  550

seq1  CGTTAATTTCTTTAATAGTAGATGCTATCCACATATTATAAATCGATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAATTTCTTTAATAGTAGATGCTATCCACATATTATAAATCGATGAG  600

seq1  GGATCTCTGCTTGGCTATGTGCCTGCCAATCAACCCCGAGTTACAAGCCC  650
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  GGATCTCTGCTTGGCTATGTGCCTGCCAATCAGCCCCTAGTTACAAGCCC  650

seq1  TGAAGCTCCTGAAGAATGGTTGCTATAATTGTTACCAATGTCTGTTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCCTGAAGAATGGTTGCTATAATTGTTACCAATGTCTGTTTTCC  700

seq1  TCATCTTCATTTGAGACAAGAAACAGAGCCTCTGATTTGCCCCTGCATTG  750
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  TCATCTTCATTTGAGACAAAAAACAGAGCCTCTGATTTGCACCTGCATTG  750

seq1  CTCTATGGGAAACTTAATTAGAAATAAGATCATACATTTTGGTTAGGTCC  800
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCTCTGGGAAACTTAATTAGAAATAAGATCATACATTTTGGTTACGTCC  800

seq1  AAACCAGAAATGCCTTCTTGGTTCCACCAGATGGCAGTTCTGTATCAACA  850
      | ||||||||||||||||| | ||| ||||||||||||||||||||||||
seq2  AGACCAGAAATGCCTTCTTTGGTCC-CCAGATGGCAGTTCTGTATCAACA  849

seq1  CAGGGATGGACGTGGAGGAGGTGGGGGGG  879
      ||||||||||||||||| |||||||||||
seq2  CAGGGATGGACGTGGAGAAGGTGGGGGGG  878