BAC Information

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BAC

Clone NameB6Ng01-063E18
Chromosome1 (Build37)
Map Location 120,079,746 - 120,080,428
singlet/doubletsinglet
Overlap genenone
Upstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368
Downstream geneLOC637083, Tsn, Mki67ip, Clasp1, Tcfcp2l1, LOC100041753, Gli2, LOC666838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063E18.bB6Ng01-063E18.g
ACCDH883435DH883436
length1,228944
definitionDH883435|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E18, 5' end.DH883436|Mus musculus domesticus DNA, BAC clone: B6Ng01-063E18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcctccaaggtctctggtgcattctagagggtcccatcacct
ccaacctcacagggttgcctgtttccattgtttctgctggccctcaagta
ttcagtcctgttcctgccccagtacctgatcatgttttccccttcccttc
cctgtcctctctccaaatcaaatcccacactctctgcccccaaaaattga
tttcttctccttcccaagtggtacgaaggcatcctcatttggacctttgg
ctaattaactttcttgaggtctgtgaattgtgtactagatattctgtatt
ttttggctaatatccacttatttgtgaggatatgccatgcttgtcctttt
gggtctgagttacctctctcaggataatattttctagttccatccatttg
tctgaaaaattcaagatgttcttgtgcttaatagctgagttgtattccat
tctgtaaatgaaccatgctttctgtatccattcttctattgtgctacatc
tgggttgtttccaggttctggctatcacatgtaagggctctatgaacata
ctggagcatgtgcccccgtggcatggtggatcatcctttgggtatatgcc
caagagtggtatatagctgggttttcaggtatatctatttgcaattttca
gaggaaccttcagattgatttccagagcagttctaccagtttgcaatccc
accagcagtggaggagtgatgatgatgatttttcattttcactcatggtt
ttgacttctttttgaaagtgaagtgtctacagttgtttggattcgtttct
gggacttccatttgattctattatcaagttgtttcattttataacaatac
caggcagattttactactattgctctgtagtacagcttgaagtcaggatg
ggtatttcttcataagttctttaactgtcaggatagtattgcatctggga
ttttttgtttatgtagaagttccaatttttcttcagaattgggtcgaatt
tgataggcattgcatgaacgagatggttgtaaatgaccttttttctagtt
tattccacccatcatgaactgtagatctgacacttctaactcttcattgt
tcggactgaattcatggctagtcgatggcctgctgtcggttcaaaggatt
tctatctcgcaatggaggaatttccaagtttcccgtcataactggaagcg
gctacgagcgcacctagattagcgaacc
gaattctataataatttagtgtttaatattagatgtgggatccttattta
tggaaagtattaaatgttcattagtgatatttttcaggtataaatggata
tgaatataaaagctgaacaaatttttatgtattaattgattcttaaaata
tacaatattattaatatgtttgatgtataaaatgcactgcaatagtaaaa
gattaacaaatgtaaatttgtattcatagaaagcaagtatccatcatcaa
atcaaatagaaacttaatgaaattttctaaaatcagcagcaaggtaaagc
tgaccactctcttcttagcttttcaatatagtgcttgaacttatagttag
aacagtaaggtatataaaggaaatcaaggagatataatttggaaatcaag
aacttaaaatattgctattggaagattatatgatagtatatgcaaatgat
aacatgcctctatcagagaacttctagagctaaaaatgtgttcagtaaaa
tggctgcttaaaaaattacctcaaaaatatcagtagccaacttttattca
aagataaatgggctgagaagaaataaggaaaacaacttctgtcacaatag
tcagaagtaaagaaaatatgttattgcaactctaatcaagcaaggcaaaa
acctgatatgacatgaacttcaagtttctgaaaaaagattgaagaagtta
ttagaagatggtcagatcttacatgttcatggataggtgtgattaaaata
gcaaaaaagatcattttaccaaaaccaatctacagattcaatgcaatgcc
catcaaaattctgacacaattcttgaaagaaaattctaaacttcctaagt
aaacaaaaatccccgaattgcaaactaatcctgacagttaagatcttatg
gtgaataacatccctgatcagctgtactacagagcatagtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_120079746_120080428
seq2: B6Ng01-063E18.g_66_748 (reverse)

seq1  TTTCAGAAACTTGAAGTTCATGTCATATCAGGTTTTTGCCTTGCTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAACTTGAAGTTCATGTCATATCAGGTTTTTGCCTTGCTTGATT  50

seq1  AGAGTTGCAATAACATATTTTCTTTACTTCTGACTATTGTGACAGAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGCAATAACATATTTTCTTTACTTCTGACTATTGTGACAGAAGTT  100

seq1  GTTTTCCTTATTTCTTCTCAGCCCATTTATCTTTGAATAAAAGTTGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTATTTCTTCTCAGCCCATTTATCTTTGAATAAAAGTTGGCTA  150

seq1  CTGATATTTTTGAGGTAATTTTTTAAGCAGCCATTTTACTGAACACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTTTTGAGGTAATTTTTTAAGCAGCCATTTTACTGAACACATTT  200

seq1  TTAGCTCTAGAAGTTCTCTGATAGAGGCATGTTATCATTTGCATATACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTAGAAGTTCTCTGATAGAGGCATGTTATCATTTGCATATACTA  250

seq1  TCATATAATCTTCCAATAGCAATATTTTAAGTTCTTGATTTCCAAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAATCTTCCAATAGCAATATTTTAAGTTCTTGATTTCCAAATTAT  300

seq1  ATCTCCTTGATTTCCTTTATATACCTTACTGTTCTAACTATAAGTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTGATTTCCTTTATATACCTTACTGTTCTAACTATAAGTTCAAG  350

seq1  CACTATATTGAAAAGCTAAGAAGAGAGTGGTCAGCTTTACCTTGCTGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATTGAAAAGCTAAGAAGAGAGTGGTCAGCTTTACCTTGCTGCTG  400

seq1  ATTTTAGAAAATTTCATTAAGTTTCTATTTGATTTGATGATGGATACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAAAATTTCATTAAGTTTCTATTTGATTTGATGATGGATACTTG  450

seq1  CTTTCTATGAATACAAATTTACATTTGTTAATCTTTTACTATTGCAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATGAATACAAATTTACATTTGTTAATCTTTTACTATTGCAGTGC  500

seq1  ATTTTATACATCAAACATATTAATAATATTGTATATTTTAAGAATCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACATCAAACATATTAATAATATTGTATATTTTAAGAATCAATT  550

seq1  AATACATAAAAATTTGTTCAGCTTTTATATTCATATCCATTTATACCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAAAAATTTGTTCAGCTTTTATATTCATATCCATTTATACCTGA  600

seq1  AAAATATCACTAATGAACATTTAATACTTTCCATAAATAAGGATCCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCACTAATGAACATTTAATACTTTCCATAAATAAGGATCCCACA  650

seq1  TCTAATATTAAACACTAAATTATTATAGAATTC  683
      |||||||||||||||||||||||||||||||||
seq2  TCTAATATTAAACACTAAATTATTATAGAATTC  683