BAC Information

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BAC

Clone NameB6Ng01-063O12
Chromosome1 (Build37)
Map Location 85,328,723 - 85,329,808
singlet/doubletsinglet
Overlap geneLOC639868
Upstream geneDner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063O12.bB6Ng01-063O12.g
ACCDH883857DH883858
length1,0691,222
definitionDH883857|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O12, 5' end.DH883858|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatgtgtgtgtcataatattcacgaaagtcaaagtagagggca
accatgtgtgtttttttccatctcagcttctttgagacaaggcaactgtc
gaccagagtggagtgcatgtagctttccacaggcttgaggggatctgaac
tcaagtcctctcacttgtgtggcaaacactgacccactgaggcaactccc
cagcccgagattgcttcttactccccgtagtcaagattctcagaaatacc
aaactctaaggtcctttacatgtgaatgaaccatgcacctaatggagtcc
ctcagagaatagaagtaccaagagggaggatgtgtttctgtcactgataa
tgagtaccatcattcttgtctacattatgttttttttttttttttttttt
ttttttttttttttttttaggaccctaagtttggcgaaatgggacttaaa
ctggagtccaaatttgaaaagggtttcaaggaagtgtttgctattcagga
aacaaatgaaaaaagttgactgaaatcaaaaacatggctggggtcacctg
gccatgtctggctcacctgcagcaacaatgaatgttctttatagactcta
tcattcccggatgaatactcttggtcatatggaaaccggtgcagctagga
gtttcacctcttggcctgggggtccatccccttttctccccatgaaatca
aaaatatggtgcattgctgctctctggtcttcaggggctaggctggagcc
tgtctccagctggctttgctccccaccactccacccctccccccacatat
tgttgcttttcttgtccctactctcctgagagcaatccacaataaaccat
aagcttccaagacttcaaacctgggggtgggcctttctggagcctcagtc
ctaaaagctgaaggcaggagatagctgcaaagcaatgcgagcctgggcta
catagtgactctcgctaccctggctttaaagtttcttggaaaaacaaacc
acttctcaaataagacagaaaaaggccttcactcaggctgtgtctaagaa
gctcactatagatatgtcc
gaattcatttgccatgttttgttttattttgttttttaagaatttgctgt
tcttttattagaatcaagttgctacagtcataaaatgctgactcgtggga
taaccaaaaaagaacctcaagaaaatgactgaattgatatgcaaatgaaa
gactgggctttggtctgcaagagctaagcaacctggatgagctgtctgga
gagaaaacagagttcttttagaatttttttctagcagctacccagagaga
actgcttggagagcaaatgcaggtcttttacaattttttcctgcaagaga
gcaaaagagagctgtctcaggcagaggaaactgtctcatgcagaaagctg
tcttgagcagaaagctatcttgagcatactacagatccaagagctatcta
cagagagctgtctagggagccatcttgagcagattacaaggctaatcagc
ttgtacccatgatttgacttttagtcatttttttggttggtggtgaacac
tctccttcctcagaaccctctccaagctgaggttgatccttagcagaact
gaagaagttagataccaataatccaaataacccaattaaaaaatgaggta
cagagctaaatagagagttttcaacaaaggaatcttgaatggctgaaaaa
cacctaaagaaatgttcaacatccttagtcatcagggaaatgcaaatcaa
aacaactctgagattccaccttacacctatcagaatggctaagatcaaaa
ctcaaagaacaacacatgctgacaaggttgtggagcaagagaaatactcc
tacactgctgggggaggacaaacttgtacaccactctggaagtcaacttg
gcagttgctcagaaaattgggaatagttctacctcaagacccagctatta
ccacacctgagcatgtacccagaagatgtgccaccatcccacaaggacat
ttgctcactatgctcagcagtttatcatataacagaaattgaacacccag
attccctcactaagaatgagaggaaaatgttgctcattaccgtgactact
acccacccataaaacaagaatatcagattctccccaattggatgacttaa
attgattctagtgaggttacccgaaccaaaggcctgctaattgtatccct
taattattagcctaaggtaggatacctgctctctataccacacgagcccc
agagtatcgcattacgagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_85328723_85329808
seq2: B6Ng01-063O12.b_45_1113 (reverse)

seq1  GGACATTATCTTATAGTGAGTCTTCCTAGACACAGGCCCTGAGTTGAGAG  50
      ||||| |||| ||||||||| |||| |||||||||  |||||| |||  |
seq2  GGACA-TATC-TATAGTGAG-CTTCTTAGACACAG--CCTGAG-TGAAGG  44

seq1  CCTTTTTCTGTCTTATTTGATGAGTGGTTTGTTTTTTCCAGAAACCTTTA  100
      ||||||||||||||||||||  |||||||||||||| | ||||| |||||
seq2  CCTTTTTCTGTCTTATTTGAGAAGTGGTTTGTTTTTCCAAGAAA-CTTTA  93

seq1  TAAGCCAGGGTAGCTGAGAGTCACTATGTAGCCCAGGCTCGCATTGCATT  150
       ||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  -AAGCCAGGGTAGC-GAGAGTCACTATGTAGCCCAGGCTCGCATTGC-TT  140

seq1  TGCAGCTATCCTCCTGCC-TCAGCCTCTCAAGGACTGAAGCTACAGGAAT  199
      ||||||||| |||||||| ||||| | |  |||||||| ||| || ||| 
seq2  TGCAGCTAT-CTCCTGCCTTCAGCTTTT--AGGACTGAGGCTCCA-GAAA  186

seq1  GAGCCACCACATGGTTTGAAGTCTTGGAAGCTTATGGTTTATTGTGGATT  249
      |  ||||| |  ||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACCCCCAGGTTTGAAGTCTTGGAAGCTTATGGTTTATTGTGGATT  236

seq1  GCTCTCAGGAGAGTAAGAGACAAGAAAAGCAACATATATGTGGGGGGAGG  299
      |||||||||||||| || |||||||||||||||| |||||||||||||||
seq2  GCTCTCAGGAGAGT-AGGGACAAGAAAAGCAACA-ATATGTGGGGGGAGG  284

seq1  GGTTGGAGTGGTGGTGGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAG  349
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GG-TGGAGTGGTGG-GGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAG  332

seq1  ACCCTTGAAGACCAGAGAGCAGCAATGCACCATACTCTTGATTTCATGGG  399
       ||| ||||||||||||||||||||||||||||| | |||||||||||||
seq2  -CCCCTGAAGACCAGAGAGCAGCAATGCACCATATTTTTGATTTCATGGG  381

seq1  GAGAAAAGGGGATGGACCCCCAGGCCAAGAGGTGTAACTCCTAGCTGCAC  449
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGAAAAGGGGATGGACCCCCAGGCCAAGAGGTGAAACTCCTAGCTGCAC  431

seq1  CTGTTTCCATATGACCAAGAGTAATCATCCGGGAATGATAGAGTCTATAA  499
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CGGTTTCCATATGACCAAGAGTATTCATCCGGGAATGATAGAGTCTATAA  481

seq1  AGAACACTCATTGCTGCTGCAGGTGAGCCAGACATGGCCAGGTGACACCA  549
      |||||| |||||| |||||||||||||||||||||||||||||||| |||
seq2  AGAACATTCATTGTTGCTGCAGGTGAGCCAGACATGGCCAGGTGACCCCA  531

seq1  GCCATGTCTCTGATTTCAGTCAACTCTTTTCATTTGTTTCCTGAATAGCA  599
      ||||||| | ||||||||||||||| ||||||||||||||||||||||||
seq2  GCCATGTTTTTGATTTCAGTCAACTTTTTTCATTTGTTTCCTGAATAGCA  581

seq1  AACACTTCCTTGAAACCCTTCTCAAATTTGGACTCCAGTCTAAGTCCCAT  649
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  AACACTTCCTTGAAACCCTTTTCAAATTTGGACTCCAGTTTAAGTCCCAT  631

seq1  TTCGCCAAACTTAGGGTCCT-AAAAAAAAAAAAAAAAAAAAAAAAAAAAA  698
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCGCCAAACTTAGGGTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  681

seq1  AAAAAAAAACATAATGTAGACAAGAATGATGGTACTCATTATCAGTGACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACATAATGTAGACAAGAATGATGGTACTCATTATCAGTGACA  731

seq1  GAAACACATCCTCCCTCTTGGTACTTCTATTCTCTGAGGGACTCCATTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACATCCTCCCTCTTGGTACTTCTATTCTCTGAGGGACTCCATTAG  781

seq1  GTGCATGGTTCATTCACATGTAAAGGACCTTAGAGTTTGGTATTTCTGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGTTCATTCACATGTAAAGGACCTTAGAGTTTGGTATTTCTGAG  831

seq1  AATCTTGACTACGGGGAGTAAGAAGCAATCTCGGGCTGGGGAGTTGCCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGACTACGGGGAGTAAGAAGCAATCTCGGGCTGGGGAGTTGCCTC  881

seq1  AGTGGGTCAGTGTTTGCCACACAAGTGAGAGGACTTGAGTTCAGATCCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCAGTGTTTGCCACACAAGTGAGAGGACTTGAGTTCAGATCCCC  931

seq1  TCAAGCCTGTGGAAAGCTACATGCACTCCACTCTGGTCGACAGTTGCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTGTGGAAAGCTACATGCACTCCACTCTGGTCGACAGTTGCCTT  981

seq1  GTCTCAAAGAAGCTGAGATGGAAAAAAACACACATGGTTGCCCTCTACTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAGAAGCTGAGATGGAAAAAAACACACATGGTTGCCCTCTACTT  1031

seq1  TGACTTTCGTGAATATTATGACACACACATCTGAATTC  1086
      ||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCGTGAATATTATGACACACACATCTGAATTC  1069