BAC Information

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BAC

Clone NameB6Ng01-064A03
Chromosome1 (Build37)
Map Location 70,641,317 - 70,775,773
singlet/doubletdoublet
Overlap geneSpag16, A830006F12Rik
Upstream geneIkzf2
Downstream geneLOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064A03.bB6Ng01-064A03.g
ACCDH883925DH883926
length1,1731,080
definitionDH883925|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A03, 5' end.DH883926|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,774,581 - 70,775,773)(70,641,317 - 70,642,405)
sequence
gaattcaataaatatggagggtaactcataccttaaattcctccaagatt
ttgtaatttttcccatgatattcacaaaagtttttcacttctttacattc
gggacagcatccattgtgttccacctttgtacatttcggatgaattttag
ggcattctggctggtcacagacaggtccatctagggcacagacacacgga
cagttggaatgccccgggaaaaaccgttctcccaacttgtatacaaagcc
gctgtcatccacacaccctttccctcgatagtcatcaaagatcagattgt
cattactggaagcctggtcaccttcatcagcaggatagtcttcgtgactg
atggcagcagaggtgaccaatccagggatgaccaatagaagtatgcaagc
ttcatgaatatgaagagccatccccctcctcacagacttctggatgttct
cctaatattaaacacactcagctccttccatgggaatgcaagaggggtgg
gctgaaaataaatatttaaaagataatttgacatataaaagataataaag
atgcagttaagcccatgcttttaaatcatttgtatggattcaatttggaa
gacactgagacttcaaatcaactaagttcatccaactgcctatactttat
tgtaaagtttgaatagtggactttggcaatatatgtttcaataaagttaa
tttatggagttattttattttggggccttcaggttgtaatttgcctttga
gtttcaatggtctggctctttgtacattgtaagaagtagttttattgagc
cttaaagggtgattgcaagtagttactggtatatagctcatggatatttg
aaattacatccctagttttctttgaactagatgagtcagtaatagaatgt
agatgttatagtaacttgcataaaaacaagaaattagggtcaagcattaa
attctaaaagcaaaggaactttttaacagcagctggatgcaagtttaaat
gagatggatccagtaaagaagctttcatcacatgcccattttctggattg
taccaactgatataagagtagcccaccaattcatggtggaataaagaaaa
atatctacttgatacaaataaatttatttatgtgattggagacggcattt
ctactcttgtgacatcttatttt
gaattctactggcagtttactgagccttctcatttacattccaattatga
tgtcgctcccttggaggggattgtcatgcttgttctagttagtgcagtgc
cacctcactaatcagccagtgatctaatagtcttccttttccctctcact
gtcatatccaaaaatcctattgcatcttgtttatttgcatgatgactttt
tcctttaactagaacttaaataccatgggagctaggactcaatccatctt
tgtcaactgttgtatctaacagacaaggactcaatatgacatattggaaa
atatttattgaataaataagcagataaatacactttaacactcgcaaagt
gttgtagttcttgactatgtctttttttttttttaagtaacaagaataaa
aaatttacgggaaagaaaaagaaaggcaatgaattagaaacaaagtttgt
acaaaattatacctgttttcttattctgcttgtatcatatattaagcccc
gctgaatgtacaatgtggtgatataaaaggaaagtgactcaggaaaatta
aatgattagcctggaaggttttagtgtctctggtctgttgccaacatact
ttatttttggagaagatctatttaatcattttgaacagtcaatagaagac
ccagatagattgtttcttctttctcaaaatgcaaattagcttcacctaat
tttagtttagtttttattaactaaataatggaaaggaatttatttgtaat
ctgagttagattaaatgataaattatcctatctgttgctgacaaaggaaa
agaattacatagcctagtctttttatagcttttagtgaatcttggaacaa
cccaaaaatccagatgaggttcataattgattccttgactgctgatgggc
cattaaggaaagatcttgagtttagagcatctttacaatgtgccctgcca
caggcaagagatgagtggcctggattcatctgtaattattttatgaaaat
taatatcccttatggagaggctggggggaaacttacttgtgaggtacaca
ttccagcctctcaattttattgttggtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70774581_70775773
seq2: B6Ng01-064A03.b_42_1214 (reverse)

seq1  AAAATAATGATGTGTAACAAGAGTAGAAATGACTGTCTTTAACAAATCCA  50
      ||||||| ||  ||| ||||||||||||||| | ||||    | ||| ||
seq2  AAAATAA-GA--TGTCACAAGAGTAGAAATG-CCGTCT----CCAAT-CA  41

seq1  CATAAATAAATTTTAATTTTTGTATCATGTAGATATATTTTCTCTTATT-  99
      ||||||||||||    | ||||||||| |||||||| |||||| ||||| 
seq2  CATAAATAAATT----TATTTGTATCAAGTAGATAT-TTTTCT-TTATTC  85

seq1  CACCATGATTTGTTGTGCTACTTCTTATATTCAGTGTGTTACAATCCAGA  149
      |||||||| ||| || ||||| ||||||| ||||| || |||||||||||
seq2  CACCATGAATTGGTGGGCTAC-TCTTATA-TCAGT-TGGTACAATCCAGA  132

seq1  ATATGGGCATGTGAATGAAAGCTTCTGTACTGGATCCATCTCATTTAAAC  199
      | ||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  AAATGGGCATGTG-ATGAAAGCTTCTTTACTGGATCCATCTCATTTAAAC  181

seq1  TTGCATCCAGCTGCTGTTTAAAAAGTTCCTTTGCTTTTAGAATTTAATGC  249
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGCATCCAGCTGCTG-TTAAAAAGTTCCTTTGCTTTTAGAATTTAATGC  230

seq1  TTGACCCTAATTTCTTGTTTTTTATGCAAGTTACTATAACATCTACATTC  299
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGACCCTAATTTCTTG-TTTTTATGCAAGTTACTATAACATCTACATTC  279

seq1  TATTACTGACTCATCTAGTTCAAAGAAAACTAGGGATGTAATTTCAAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGACTCATCTAGTTCAAAGAAAACTAGGGATGTAATTTCAAATA  329

seq1  TCCATGAGCTATATACCAGTAACTACTTGCAATCACCCTTTAAGGCTCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAGCTATATACCAGTAACTACTTGCAATCACCCTTTAAGGCTCAA  379

seq1  TAAAACTACTTCTTACAATGTACAAAGAGCCAGACCATTGAAACTCAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTACTTCTTACAATGTACAAAGAGCCAGACCATTGAAACTCAAAG  429

seq1  GCAAATTACAACCTGAAGGCCCCAAAATAAAATAACTCCATAAATTAACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTACAACCTGAAGGCCCCAAAATAAAATAACTCCATAAATTAACT  479

seq1  TTATTGAAACATATATTGCCAAAGTCCACTATTCAAACTTTACAATAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAACATATATTGCCAAAGTCCACTATTCAAACTTTACAATAAAG  529

seq1  TATAGGCAGTTGGATGAACTTAGTTGATTTGAAGTCTCAGTGTCTTCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCAGTTGGATGAACTTAGTTGATTTGAAGTCTCAGTGTCTTCCAA  579

seq1  ATTGAATCCATACAAATGATTTAAAAGCATGGGCTTAACTGCATCTTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATCCATACAAATGATTTAAAAGCATGGGCTTAACTGCATCTTTAT  629

seq1  TATCTTTTATATGTCAAATTATCTTTTAAATATTTATTTTCAGCCCACCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTATATGTCAAATTATCTTTTAAATATTTATTTTCAGCCCACCC  679

seq1  CTCTTGCATTCCCATGGAAGGAGCTGAGTGTGTTTAATATTAGGAGAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCATTCCCATGGAAGGAGCTGAGTGTGTTTAATATTAGGAGAACA  729

seq1  TCCAGAAGTCTGTGAGGAGGGGGATGGCTCTTCATATTCATGAAGCTTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGTCTGTGAGGAGGGGGATGGCTCTTCATATTCATGAAGCTTGC  779

seq1  ATACTTCTATTGGTCATCCCTGGATTGGTCACCTCTGCTGCCATCAGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTATTGGTCATCCCTGGATTGGTCACCTCTGCTGCCATCAGTCA  829

seq1  CGAAGACTATCCTGCTGATGAAGGTGACCAGGCTTCCAGTAATGACAATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGACTATCCTGCTGATGAAGGTGACCAGGCTTCCAGTAATGACAATC  879

seq1  TGATCTTTGATGACTATCGAGGGAAAGGGTGTGTGGATGACAGCGGCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTGATGACTATCGAGGGAAAGGGTGTGTGGATGACAGCGGCTTT  929

seq1  GTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTG  979

seq1  TGTCTGTGCCCTAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGCCCTAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAA  1029

seq1  TTCATCCGAAATGTACAAAGGTGGAACACAATGGATGCTGTCCCGAATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCGAAATGTACAAAGGTGGAACACAATGGATGCTGTCCCGAATGT  1079

seq1  AAAGAAGTGAAAAACTTTTGTGAATATCATGGGAAAAATTACAAAATCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTGAAAAACTTTTGTGAATATCATGGGAAAAATTACAAAATCTT  1129

seq1  GGAGGAATTTAAGGTATGAGTTACCCTCCATATTTATTGAATTC  1193
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATTTAAGGTATGAGTTACCCTCCATATTTATTGAATTC  1173

seq1: chr1_70641317_70642405
seq2: B6Ng01-064A03.g_66_1145

seq1  GAATTCTACTGGCAGTTTACTGAGCCTTCTCATTTACATTCCAATTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGGCAGTTTACTGAGCCTTCTCATTTACATTCCAATTATGA  50

seq1  TGTCGCTCCCTTGGAGGGGATTGTCATGCTTGTTCTAGTTAGTGCAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCTCCCTTGGAGGGGATTGTCATGCTTGTTCTAGTTAGTGCAGTGC  100

seq1  CACCTCACTAATCAGCCAGTGATCTAATAGTCTTCCTTTTCCCTCTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCACTAATCAGCCAGTGATCTAATAGTCTTCCTTTTCCCTCTCACT  150

seq1  GTCATATCCAAAAATCCTATTGCATCTTGTTTATTTGCATGATGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCCAAAAATCCTATTGCATCTTGTTTATTTGCATGATGACTTTT  200

seq1  TCCTTTAACTAGAACTTAAATACCATGGGAGCTAGGACTCAATCCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAACTAGAACTTAAATACCATGGGAGCTAGGACTCAATCCATCTT  250

seq1  TGTCAACTGTTGTATCTAACAGACAAGGACTCAATATGACATATTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACTGTTGTATCTAACAGACAAGGACTCAATATGACATATTGGAAA  300

seq1  ATATTTATTGAATAAATAAGCAGATAAATACACTTTAACACTCGCAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTGAATAAATAAGCAGATAAATACACTTTAACACTCGCAAAGT  350

seq1  GTTGTAGTTCTTGACTATGTCTTTTTTTTTTTTTAAGTAACAAGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGTTCTTGACTATGTCTTTTTTTTTTTTTAAGTAACAAGAATAAA  400

seq1  AAATTTACGGGAAAGAAAAAGAAAGGCAATGAATTAGAAACAAAGTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACGGGAAAGAAAAAGAAAGGCAATGAATTAGAAACAAAGTTTGT  450

seq1  ACAAAATTATACCTGTTTTCTTATTCTGCTTGTATCATATATTAAGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTATACCTGTTTTCTTATTCTGCTTGTATCATATATTAAGCCCC  500

seq1  GCTGAATGTACAATGTGGTGATATAAAAGGAAAGTGACTCAGGAAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGTACAATGTGGTGATATAAAAGGAAAGTGACTCAGGAAAATTA  550

seq1  AATGATTAGCCTGGAAGGTTTTAGTGTCTCTGGTCTGTTGCCAACATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAGCCTGGAAGGTTTTAGTGTCTCTGGTCTGTTGCCAACATACT  600

seq1  TTATTTTTGGAGAAGATCTATTTAATCATTTTGAACAGTCAATAGAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGGAGAAGATCTATTTAATCATTTTGAACAGTCAATAGAAGAC  650

seq1  CCAGATAGATTGTTTCTTCTTTCTCAAAATGCAAATTAGCTTCACCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAGATTGTTTCTTCTTTCTCAAAATGCAAATTAGCTTCACCTAAT  700

seq1  TTTAGTTTAGTTTTTATTAACTAAATAATGGAAAGGAATTTATTTGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTAGTTTTTATTAACTAAATAATGGAAAGGAATTTATTTGTAAT  750

seq1  CTGAGTTAGATTAAATGATAAATTATCCTATCTGTTGCTGACAAAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTAGATTAAATGATAAATTATCCTATCTGTTGCTGACAAAGGAAA  800

seq1  AGAATTACATAGCCTAGTCTTTTTATAGCTTTTAGTGAATCTTGGAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTACATAGCCTAGTCTTTTTATAGCTTTTAGTGAATCTTGGAACAA  850

seq1  CCCAAAAATCCAGAAGGAGGTTTCATAATTGATTCCTTGACTGCTGATGG  900
      ||||||||||||| | |||| |||||||||||||||||||||||||||||
seq2  CCCAAAAATCCAG-ATGAGG-TTCATAATTGATTCCTTGACTGCTGATGG  898

seq1  GCCATTAAGGAAAGATTCTTGAGTTTAGAAGCATCTTTACAAATGTGCCC  950
      ||||||||||||||| |||||||||||| ||||||||||| |||||||||
seq2  GCCATTAAGGAAAGA-TCTTGAGTTTAG-AGCATCTTTAC-AATGTGCCC  945

seq1  TGCCACAGGCAAGAGATGAGTGGCCTGGATTCATCTGTAATTATTATAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  TGCCACAGGCAAGAGATGAGTGGCCTGGATTCATCTGTAATTATT-TTAT  994

seq1  GATAATATTAATATCCTTAATGGAGAGGCTGGGGTGAAACTTACTTGTAG  1050
      |  || |||||||||| | ||||||||||||||| ||||||||||||| |
seq2  G--AAAATTAATATCCCTTATGGAGAGGCTGGGGGGAAACTTACTTGT-G  1041

seq1  AGTAGCACATTCAAGCTTCTCAATTTTATGTGTGGTACC  1089
      ||   ||||||| ||| ||||||||||||   |||||||
seq2  AGGTACACATTCCAGCCTCTCAATTTTATTGTTGGTACC  1080