BAC Information

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BAC

Clone NameB6Ng01-064H21
Chromosome1 (Build37)
Map Location 11,956,168 - 12,044,624
singlet/doubletdoublet
Overlap geneA830018L16Rik
Upstream geneC030045D06Rik
Downstream geneLOC665262, LOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H21.bB6Ng01-064H21.g
ACCDH884265DH884266
length7741,146
definitionDH884265|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H21, 5' end.DH884266|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,043,851 - 12,044,624)(11,956,168 - 11,957,324)
sequence
gaattcaagaatatctgtcattcagccttcagatagataaaaggcccaga
acaaaaatcaaatctggcttggacttctcattgctatgttatgaccaaag
ctaaattatcatgagaagaaaggaaggctacctaggctacctgaaaaagt
taagctgtggctctacatacaggcaatgctttctgatcatttgtgtactt
aacacacatactggctggcacttaactacctcttgatggatggcaggact
gccatgtggtggttctcaaaattaaacacatcagaactacctggagcctt
tcaaaaccacatgtagaaaattctcagcctcaaagactttgatttaatag
tctgggatggggcccaaggactttgtgtttctatgtaggtaggtaacaat
gatgctgttggttagcacaacacatctagaaaaccactgctctagggttg
actcaaatatctcgactccagtgccttcagaacaatcaatggcccatgat
gcacctgagagcatgggccatcttatccctgagtcatacaggaatttacc
catggctgtaaaagctctctgtatctggataaaagagactcagaaatatt
caaatagtgtaaactcacaagttccttccttatcatcatttgttcttcat
ggggtaatgctagttttggtaatcctttgaacttgacatccacagacaat
tacctccagcaaacaaatactcttatacaaaataaaaatagtgcttcaaa
gggggagtgggtgggtaggggatt
gaattccacataaaaccagagacagtgaaacttatagaggagaaagtggg
gaaaagtctcgaatatatgggcacagggtaaaaattcctgaatagaacag
caatggcttgtgctgtaagatcaagaatcaacagaggggaccacataaaa
ttataaagtttctctaaggcaaagacactgtcaataaaacaaaaagacca
ccaacatattctgaaaggatctttaccaatcctaaatcagataggggact
aatatccaatatctataaacaactcaagtagatggactccagaaaatcaa
ataaccccattaaaaatggggctcagatctaaacaaagaattctcacctg
aggaatactgaatgtctgagaagcacctgtaaaaatgttcagcatccatg
actacgtggaaagagggagaaagggagggcaagaacaagactaagagcaa
ggatgtaaaagcaagggtgtaagagctctgtgtagaatttcctcggcagt
tcatgaaaggtttgccctgtcccaaaagccatcaagaagcgttcatacca
tctttggagcatctgctgtggatctgactctagttgtccacacagctgaa
gtctaacagaaacattctgcatcacatgtcaatttttttctcagctgtac
agtcattttaaatcatttatttaaatttcaaaagaataaaaatttttccc
ttgccaacttttataattgtttcatatctagatacagatagatacataca
tatacagatagatacagatacagagatacagatacagagatacagataca
gatacagatacagatacagatacagatacagatacagatacagatacaga
tacagatacagatacagatacggatccgaggtcttctttcatcaaaaaaa
aatacaaaatgtccttgaggactgctctcagatagcacttgttcttactt
ttcccagcactgtggataacatttaatactaaaaaatataaactttgatt
tattgaatcaaatcagatgggttaaatggagaaccttttgaaatttgtaa
tggcttttaagcagtcagttatttaaataaaatagccctttcattatttc
ccatagtttagaaaaatacgagatgaagtattttttcctaacaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12043851_12044624
seq2: B6Ng01-064H21.b_45_818 (reverse)

seq1  AATCCCCTACCCACCCACTCCCCCTTTGAAGCACTATTTTTATTTTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTACCCACCCACTCCCCCTTTGAAGCACTATTTTTATTTTGTAT  50

seq1  AAGAGTATTTGTTTGCTGGAGGTAATTGTCTGTGGATGTCAAGTTCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTATTTGTTTGCTGGAGGTAATTGTCTGTGGATGTCAAGTTCAAAG  100

seq1  GATTACCAAAACTAGCATTACCCCATGAAGAACAAATGATGATAAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCAAAACTAGCATTACCCCATGAAGAACAAATGATGATAAGGAAG  150

seq1  GAACTTGTGAGTTTACACTATTTGAATATTTCTGAGTCTCTTTTATCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTGAGTTTACACTATTTGAATATTTCTGAGTCTCTTTTATCCAG  200

seq1  ATACAGAGAGCTTTTACAGCCATGGGTAAATTCCTGTATGACTCAGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAGCTTTTACAGCCATGGGTAAATTCCTGTATGACTCAGGGAT  250

seq1  AAGATGGCCCATGCTCTCAGGTGCATCATGGGCCATTGATTGTTCTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCCCATGCTCTCAGGTGCATCATGGGCCATTGATTGTTCTGAAG  300

seq1  GCACTGGAGTCGAGATATTTGAGTCAACCCTAGAGCAGTGGTTTTCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGAGTCGAGATATTTGAGTCAACCCTAGAGCAGTGGTTTTCTAGA  350

seq1  TGTGTTGTGCTAACCAACAGCATCATTGTTACCTACCTACATAGAAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTGCTAACCAACAGCATCATTGTTACCTACCTACATAGAAACAC  400

seq1  AAAGTCCTTGGGCCCCATCCCAGACTATTAAATCAAAGTCTTTGAGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTTGGGCCCCATCCCAGACTATTAAATCAAAGTCTTTGAGGCTG  450

seq1  AGAATTTTCTACATGTGGTTTTGAAAGGCTCCAGGTAGTTCTGATGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCTACATGTGGTTTTGAAAGGCTCCAGGTAGTTCTGATGTGTT  500

seq1  TAATTTTGAGAACCACCACATGGCAGTCCTGCCATCCATCAAGAGGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGAGAACCACCACATGGCAGTCCTGCCATCCATCAAGAGGTAGT  550

seq1  TAAGTGCCAGCCAGTATGTGTGTTAAGTACACAAATGATCAGAAAGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCCAGCCAGTATGTGTGTTAAGTACACAAATGATCAGAAAGCATT  600

seq1  GCCTGTATGTAGAGCCACAGCTTAACTTTTTCAGGTAGCCTAGGTAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTATGTAGAGCCACAGCTTAACTTTTTCAGGTAGCCTAGGTAGCCT  650

seq1  TCCTTTCTTCTCATGATAATTTAGCTTTGGTCATAACATAGCAATGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTCTCATGATAATTTAGCTTTGGTCATAACATAGCAATGAGAA  700

seq1  GTCCAAGCCAGATTTGATTTTTGTTCTGGGCCTTTTATCTATCTGAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCCAGATTTGATTTTTGTTCTGGGCCTTTTATCTATCTGAAGGC  750

seq1  TGAATGACAGATATTCTTGAATTC  774
      ||||||||||||||||||||||||
seq2  TGAATGACAGATATTCTTGAATTC  774

seq1: chr1_11956168_11957324
seq2: B6Ng01-064H21.g_67_1212

seq1  GAATTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAGTGGG  50

seq1  GAAAAGTCTCGAATATATGGGCACAGGGTAAAAATTCCTGAATAGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCTCGAATATATGGGCACAGGGTAAAAATTCCTGAATAGAACAG  100

seq1  CAATGGCTTGTGCTGTAAGATCAAGAATCAACAGAGGGGACCACATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTTGTGCTGTAAGATCAAGAATCAACAGAGGGGACCACATAAAA  150

seq1  TTATAAAGTTTCTCTAAGGCAAAGACACTGTCAATAAAACAAAAAGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGTTTCTCTAAGGCAAAGACACTGTCAATAAAACAAAAAGACCA  200

seq1  CCAACATATTCTGAAAGGATCTTTACCAATCCTAAATCAGATAGGGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATATTCTGAAAGGATCTTTACCAATCCTAAATCAGATAGGGGACT  250

seq1  AATATCCAATATCTATAAACAACTCAAGTAGATGGACTCCAGAAAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAATATCTATAAACAACTCAAGTAGATGGACTCCAGAAAATCAA  300

seq1  ATAACCCCATTAAAAATGGGGCTCAGATCTAAACAAAGAATTCTCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCATTAAAAATGGGGCTCAGATCTAAACAAAGAATTCTCACCTG  350

seq1  AGGAATACTGAATGTCTGAGAAGCACCTGTAAAAATGTTCAGCATCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATACTGAATGTCTGAGAAGCACCTGTAAAAATGTTCAGCATCCATG  400

seq1  ACTACGTGGAAAGAGGGAGAAAGGGAGGGCAAGAACAAGACTAAGAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTGGAAAGAGGGAGAAAGGGAGGGCAAGAACAAGACTAAGAGCAA  450

seq1  GGATGTAAAAGCAAGGGTGTAAGAGCTCTGTGTAGAATTTCCTCGGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAAAAGCAAGGGTGTAAGAGCTCTGTGTAGAATTTCCTCGGCAGT  500

seq1  TCATGAAAGGTTTGCCCTGTCCCAAAAGCCATCAAGAAGCGTTCATACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAGGTTTGCCCTGTCCCAAAAGCCATCAAGAAGCGTTCATACCA  550

seq1  TCTTTGGAGCATCTGCTGTGGATCTGACTCTAGTTGTCCACACAGCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGAGCATCTGCTGTGGATCTGACTCTAGTTGTCCACACAGCTGAA  600

seq1  GTCTAACAGAAACATTCTGCATCACATGTCAATTTTTTTCTCAGCTGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAACAGAAACATTCTGCATCACATGTCAATTTTTTTCTCAGCTGTAC  650

seq1  AGTCATTTTAAATCATTTATTTAAATTTCAAAAGAAT-AAAATTTTTCCC  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTCATTTTAAATCATTTATTTAAATTTCAAAAGAATAAAAATTTTTCCC  700

seq1  TTGCCAACTTTTATAATTGTTTCATATCTAGATACAGATAGATACATACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAACTTTTATAATTGTTTCATATCTAGATACAGATAGATACATACA  750

seq1  TATACAGATAGATACAGATACAGAGATACAGATACAGAGATACAGATACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGATAGATACAGATACAGAGATACAGATACAGAGATACAGATACA  800

seq1  GATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA  850

seq1  TACAGATACAGATACAGATACAGATACAGATGTCTTCTTTCATCAAAAAA  899
      ||||||||||||||||||||| ||| | || ||||||||||||| |||||
seq2  TACAGATACAGATACAGATACGGAT-CCGAGGTCTTCTTTCATC-AAAAA  898

seq1  AAAATACAAAATGTCCTTGAGGACTGCTCTCAGATAGCACTTGTTCTTAA  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAATACAAAATGTCCTTGAGGACTGCTCTCAGATAGCACTTGTTCTT-A  947

seq1  CTTTTCCCAGCACTGTGGATAACAATTTAATACTTAAAAAATATAAAACT  999
      ||||||||||||||||||||||| ||||||||| |||||||||| |||||
seq2  CTTTTCCCAGCACTGTGGATAAC-ATTTAATAC-TAAAAAATAT-AAACT  994

seq1  ATGATTTTATGAATCAAATCAGATGGATAAAATGAGAAACTTTTTGAAAT  1049
       ||||||  ||||||||||||||||| | |||||   ||| |||||||||
seq2  TTGATTTATTGAATCAAATCAGATGGGTTAAATGGAGAACCTTTTGAAAT  1044

seq1  ATGGTAAT-GCTTTT-AGCAGTCAGTATATTAAAATTAAATAGCCCTTTC  1097
       | ||||| |||||| |||||||||| |||| |||| |||||||||||||
seq2  -TTGTAATGGCTTTTAAGCAGTCAGT-TATTTAAATAAAATAGCCCTTTC  1092

seq1  ATTATTTCCACATAGATTTAAGAAAAATAACGAGATTGAATGTATTTTCT  1147
      ||||||||| |||||  || |||||||| |||||| |||| ||||||| |
seq2  ATTATTTCC-CATAG--TTTAGAAAAAT-ACGAGA-TGAA-GTATTTTTT  1136

seq1  CTAAACAAAC  1157
      |  |||||||
seq2  CCTAACAAAC  1146