BAC Information

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BAC

Clone NameB6Ng01-064K14
Chromosome1 (Build37)
Map Location 12,837,116 - 12,972,556
singlet/doubletdoublet
Overlap geneSulf1, Slco5a1
Upstream geneA830018L16Rik, LOC665262, LOC100039709, LOC621353, LOC100039733
Downstream geneLOC383490, Prdm14, Ncoa2, LOC665341, LOC100039812, EG621685, Tram1, Lactb2, Xkr9, LOC100039843, EG433273, LOC100039859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064K14.bB6Ng01-064K14.g
ACCDH884377DH884378
length4781,068
definitionDH884377|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K14, 5' end.DH884378|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,972,073 - 12,972,556)(12,837,116 - 12,838,150)
sequence
cattttccctttcttggaagaccccctcctccacctggtcctttactata
cctaacctctgtgggtattctgaatgaaacacacacatctaaagcacaaa
acttttaacgctgaaaccttttgtcgtggtcttcttctcctcacaatttg
ttattgttatttttattattgttgttactagtattataggcaaggtctct
ctcacttcatatccctggctggcatgtagaacacgtcctgactttcaaca
aggacattgtgagctacctgcaatgggtgctgggaactgaactcaggtcc
tctgcaagaacagtatgagctcttaagtgctttccagtccctgtagtggc
ttatagttagtgcatgcaaaaatattaaggttttcatgatttctatggtg
ctttagactttctggaccatattcttggagtagagaatactgtaatgttg
gtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattcatcccaggatccatataaaatgctaggctaagtaaacaaggttg
caatgtcattgctggggagatcgaaacaggcagctccacagggcttgtgg
ccagccagtgtagactgctttagggagttccagactaaagagagatcctg
tttcaaaaatcaaggtaaccgtcacccaaagttgctctctgtactctaat
gcatacacatgtgtacctacacacacgagcatagactctcttgtgtagtg
tgtagaagcagcatccgtccataacaagctgatgtccatcaagctgaggc
agggttagagggtgagcatccagatagagagaggagtgctaggagatcat
caagtgggaagatttgtcaccctgactctaagaagtccctgaaactgagg
ggacgtaaccagccatatggcatacataaaataaaataaacgggctatat
aagttatgagctagtcaggaaacaagcccaagcttatagctagtcattta
ttaataaatattaagtctcagagtcattatctgagaactggggtgagaat
agaaaaagctatacacacatgcatgcatacatgcatactcttatatacaa
gaacagtgctggagagggtcatctgtaattacaaatgacattttcttcaa
ctccatcaagctgggctccacccttatctaagactgtccctccatgtgtg
gttgtgacactggctgtgtgactctgagacaaagcaaaggcattaattct
gttgctttatgaaacaactatgttttcctcttccataaaggataaaaata
accacaaatagaatctctagtactcttctccaatactccagtcacttgtc
cagtttggagatactaccatcaagagtaagggagggtaacttactagtgc
ctgacacttgaccttgctcttcagctctatgacccttgcattctcagatt
tcacagcagcttgtgtgaggaaagatgtactgtcatgacagcatcacagc
actagagacgaaaccatgagcttgagagaaatctgacatagcagctatga
gctctcattcttctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12972073_12972556
seq2: B6Ng01-064K14.b_49_532 (reverse)

seq1  ACACACACACACACACACACACACACACCAACATTACAGTATTCTCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACCAACATTACAGTATTCTCTACT  50

seq1  CCAAGAATATGGTCCAGAAAGTCTAAAGCACCATAGAAATCATGAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATATGGTCCAGAAAGTCTAAAGCACCATAGAAATCATGAAAACC  100

seq1  TTAATATTTTTGCATGCACTAACTATAAGCCACTACAGGGACTGGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTTTGCATGCACTAACTATAAGCCACTACAGGGACTGGAAAGC  150

seq1  ACTTAAGAGCTCATACTGTTCTTGCAGAGGACCTGAGTTCAGTTCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAGCTCATACTGTTCTTGCAGAGGACCTGAGTTCAGTTCCCAGC  200

seq1  ACCCATTGCAGGTAGCTCACAATGTCCTTGTTGAAAGTCAGGACGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTGCAGGTAGCTCACAATGTCCTTGTTGAAAGTCAGGACGTGTTC  250

seq1  TACATGCCAGCCAGGGATATGAAGTGAGAGAGACCTTGCCTATAATACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCCAGCCAGGGATATGAAGTGAGAGAGACCTTGCCTATAATACTA  300

seq1  GTAACAACAATAATAAAAATAACAATAACAAATTGTGAGGAGAAGAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAACAATAATAAAAATAACAATAACAAATTGTGAGGAGAAGAAGAC  350

seq1  CACGACAAAAGGTTTCAGCGTTAAAAGTTTTGTGCTTTAGATGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGACAAAAGGTTTCAGCGTTAAAAGTTTTGTGCTTTAGATGTGTGTGT  400

seq1  TTCATTCAGAATACCCACAGAGGTTAGGTATAGTAAAGGACCAGGTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAGAATACCCACAGAGGTTAGGTATAGTAAAGGACCAGGTGGAG  450

seq1  GAGGGGGTCTTCCAAGAAAGGGAAAATGGAATTC  484
      ||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTCTTCCAAGAAAGGGAAAATGGAATTC  484

seq1: chr1_12837116_12838150
seq2: B6Ng01-064K14.g_130_1137

seq1  GCTGGGGAGATCGAAACAGGCAGCTCCACAGGGCTTGTGGCCAGCCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGATCGAAACAGGCAGCTCCACAGGGCTTGTGGCCAGCCAGTG  50

seq1  TAGACTGCTTTAGGGAGTTCCAGACTAAAGAGAGATCCTGTTTCAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGCTTTAGGGAGTTCCAGACTAAAGAGAGATCCTGTTTCAAAAAT  100

seq1  CAAGGTAACCGTCACCCAAAGTTGCTCTCTGTACTCTAATGCATACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAACCGTCACCCAAAGTTGCTCTCTGTACTCTAATGCATACACAT  150

seq1  GTGTACCTACACACACGAGCATAGACTCTCTTGTGTAGTGTGTAGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTACACACACGAGCATAGACTCTCTTGTGTAGTGTGTAGAAGCA  200

seq1  GCATCCGTCCATAACAAGCTGATGTCCATCAAGCTGAGGCAGGGTTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCGTCCATAACAAGCTGATGTCCATCAAGCTGAGGCAGGGTTAGAG  250

seq1  GGTGAGCATCCAGATAGAGAGAGGAGTGCTAGGAGATCATCAAGTGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCATCCAGATAGAGAGAGGAGTGCTAGGAGATCATCAAGTGGGAA  300

seq1  GATTTGTCACCCTGACTCTAAGAAGTCCCTGAAACTGAGGGGACGTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCACCCTGACTCTAAGAAGTCCCTGAAACTGAGGGGACGTAACC  350

seq1  AGCCATATGGCATACATAAAATAAAATAAACGGGCTATATAAGTTATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATGGCATACATAAAATAAAATAAACGGGCTATATAAGTTATGAG  400

seq1  CTAGTCAGGAAACAAGCCCAAGCTTATAGCTAGTCATTTATTAATAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAGGAAACAAGCCCAAGCTTATAGCTAGTCATTTATTAATAAATA  450

seq1  TTAAGTCTCAGAGTCATTATCTGAGAACTGGGGTGAGAATAGAAAAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCTCAGAGTCATTATCTGAGAACTGGGGTGAGAATAGAAAAAGCT  500

seq1  ATACACACATGCATGCATACATGCATACTCTTATATACAAGAACAGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATGCATGCATACATGCATACTCTTATATACAAGAACAGTGCT  550

seq1  GGAGAGGGTCATCTGTAATTACAAATGACATTTTCTTCAACTCCATCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGTCATCTGTAATTACAAATGACATTTTCTTCAACTCCATCAAG  600

seq1  CTGGGCTCCACCCTTATCTAAGACTGTCCCTCCATGTGTGGTTGTGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCCACCCTTATCTAAGACTGTCCCTCCATGTGTGGTTGTGACAC  650

seq1  TGGCTGTGTGACTCTGAGACAAAGCAAAGGCATTAATTCTGTTGCTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGACTCTGAGACAAAGCAAAGGCATTAATTCTGTTGCTTTAT  700

seq1  GAAACAACTATGTTTTCCTCTTCCATAAAGGATAAAAATAACCACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACTATGTTTTCCTCTTCCATAAAGGATAAAAATAACCACAAATA  750

seq1  GAATCTCTAGTACTCTTCTCCCAATACTCCAGTCACTTGTCCAGTTTTGG  800
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  GAATCTCTAGTACTCTTCT-CCAATACTCCAGTCACTTGTCCAG-TTTGG  798

seq1  AGGATACTACCATCAAGAGTTAGGGAGGGTAACTTACTTAGTGGCCTGAC  850
      | |||||||||||||||||| |||||||||||||||| |||| |||||||
seq2  A-GATACTACCATCAAGAGTAAGGGAGGGTAACTTAC-TAGT-GCCTGAC  845

seq1  ACTTGACCTTGCTCTTCAGCCTCTATGACCCCTTGCATTCTCAGATTTCA  900
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  ACTTGACCTTGCTCTTCAG-CTCTATGA-CCCTTGCATTCTCAGATTTCA  893

seq1  CAGCCAGCTTGTGTGAAGGAAAGGATGTACTTGTCATTGACAGCCAATCA  950
      ||| ||||||||||| |||||| ||||||| ||||| |||||||  ||||
seq2  CAG-CAGCTTGTGTG-AGGAAA-GATGTAC-TGTCA-TGACAGC--ATCA  936

seq1  CAGCACTTAGAAGACAGAAACCATGAAGCTTGTAGAGAAATCTTGACATA  1000
      |||||| ||| |||| ||||||||| |||||| ||||||||| |||||||
seq2  CAGCAC-TAG-AGAC-GAAACCATG-AGCTTG-AGAGAAATC-TGACATA  980

seq1  GCCAGCTTATGAGGCCTTCTCATTCTTTCCTTTGT  1035
      | |||| ||||||    ||||||||||  ||||||
seq2  G-CAGC-TATGAG---CTCTCATTCTT--CTTTGT  1008