MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-066N12
Chromosome	1 (Build37)
Map Location	100,673,653 - 100,674,677
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream gene	C230078M14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zh2c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252876 MGI:2182036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18484 MGI:97475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041823 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 571 ESTs, 7 Proteins

name	LOC666153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100040887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 3 Proteins

name	Slco6d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70866 MGI:1918116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins

name	LOC100041868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 63 Proteins

name	EG666182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666182 MGI:3644984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	C230078M14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241175 MGI:3606070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zh2c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922603 GeneID:252876 MGI:2182036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, H2C2 domain containing transcript_id : NM_026250.2

name	Pam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367449 GeneID:18484 MGI:97475
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylglycine alpha-amidating monooxygenase transcript_id : NM_013626.2

name	LOC100041823 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234233 GeneID:100041823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 571 ESTs, 7 Proteins product : similar to general transcription factor transcript_id : XM_001477813.1

name	LOC100040887 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234217 GeneID:100040887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 3 Proteins product : similar to CD2 antigen (cytoplasmic tail) binding protein 2 transcript_id : XM_001475440.1

name	Slco6d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363832 GeneID:70866 MGI:1918116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins product : solute carrier organic anion transporter family, member 6d1, transcript variant 1 transcript_id : XM_129964.3

name	LOC100041868 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234235 GeneID:100041868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 63 Proteins product : similar to serine/threonine kinase 38-like transcript_id : XM_001477834.1

name	EG666182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363835 GeneID:666182 MGI:3644984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG666182 transcript_id : XM_991070.1

name	C230078M14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485745 GeneID:241175 MGI:3606070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230078M14Rik gene transcript_id : NM_172851.2

name	Zh2c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922604 GeneID:252876 MGI:2182036
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0015074 - DNA integration [Evidence IEA] codon_start : 1 product : zinc finger, H2C2 domain containing protein_id : NP_080526.2

name	Pam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305367 GeneID:18484 MGI:97475
definition	GO_component : GO:0005829 - cytosol [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004598 - peptidylamidoglycolate lyase activity [Evidence IEA]; GO:0004504 - peptidylglycine monooxygenase activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006518 - peptide metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation function : alpha-amidating enzyme product : peptidylglycine alpha-amidating monooxygenase protein_id : NP_038654.1

name	LOC100041823 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234234 GeneID:100041823
definition	codon_start : 1 product : similar to general transcription factor protein_id : XP_001477863.1

name	LOC100040887 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234218 GeneID:100040887
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475490.1

name	Slco6d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20857651 GeneID:70866 MGI:1918116
definition	codon_start : 1 product : solute carrier organic anion transporter family, member 6d1 isoform 1 protein_id : XP_129964.1

name	LOC100041868 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234236 GeneID:100041868
definition	codon_start : 1 product : similar to serine/threonine kinase 38-like protein_id : XP_001477884.1

name	EG666182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363836 GeneID:666182 MGI:3644984
definition	codon_start : 1 product : similar to putative retrovirus-related gag protein protein_id : XP_996164.1

name	C230078M14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:128485746 GeneID:241175 MGI:3606070
definition	codon_start : 1 note : contactin associated protein-like 5-2 product : contactin associated protein-like 5 protein_id : NP_766439.2

name	LOC666153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666153
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:207194
definition	standard_name : BE688627

name	(CDS detail)
type	STS
link
xref	UniSTS:178444
definition	standard_name : U79523

name	(CDS detail)
type	STS
link
xref	UniSTS:225022
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:185448
definition	standard_name : BB187771

name	(CDS detail)
type	STS
link
xref	UniSTS:234182
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:122683
definition	standard_name : 01.MMHAP9FLA1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:209706
definition	standard_name : RH126583

name	(CDS detail)
type	STS
link
xref	UniSTS:128445
definition	standard_name : D1Mit11

name	(CDS detail)
type	STS
link
xref	UniSTS:125167
definition	standard_name : MHAa38d11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:224807
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162212
definition	standard_name : RH125390

name	(CDS detail)
type	STS
link
xref	UniSTS:224725
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128593
definition	standard_name : D1Mit25

name	(CDS detail)
type	STS
link
xref	UniSTS:128494
definition	standard_name : D1Mit157

name	(CDS detail)
type	STS
link
xref	UniSTS:128602
definition	standard_name : D1Mit257

clone name	MSMg01-493K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447P24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-272B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-063K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-067K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-389B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304O07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-066N12.b	B6Ng01-066N12.g
ACC	DH885905	DH885906
length	1,164	1,021
definition	DH885905\|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N12, 5' end.	DH885906\|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N12, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tctacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacagtatgcccctccttagaagtgggaa caaaacacccttggaaggagttacagagacaaagtgtggagctgagatga aaggatggaccatgtagagactgccttatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttatcaaaa ggacccagatgtagctgtctcttgtgagactatgccggggcttagcaaac acagaagtggatgcccacagtcagctaatggatggatcacagggctccca atggaggagcagagaaagtcccaaggagctaaagggatctgcaccctata gttggatcaacattatgactacagtacccggagctctgactctagctgca ttgtatcaaagatgctagtcggcatccctggaaagaaagccttgacacaa actttatatgccccaaacaggtactcaaggccaaaaggggagtggcggtt agggattgtgctct	gaattccttcattttttgtttgtttttaaatctttctccaacaaaattaa tgtcaaaataagtcaaacaatggactgcatgggtacactctaaagtcatt gatgcttttcttgataggaacttcacagaatgaacttccctgaccactca cagtcatgaaatgtgaaggagcaaagtggacaaatgtatttttcctcgtt aatttataaataaccattttaagcttcatcttattagtactattgagttt tggcctgaattaaacataaatccctgcctcatcatcgatcaagcccttcc tccagcaaatgaaagcacacagttagcacctgctttgcttctccacacca ctgcctccttcacctgccccttcccttctaaggccactgcctgacattag aagacagggtagaagagggaagtgccagaatataaaccaggcaggactct gcttgcctgcttggggcacagatctgaaaagcctttcgttcatggtgtga agacatttatactacacacactgaagaaaatggcagtgcctggaaacaga tgagacagtctgcacataaaaaacccagcactgctattttcctttcaata gaaggatcactgaaaaggggaagagttagacgaaaacctggcaggcatct gggcttcaagtggccttttgtgcaagggcaccacccaatcacaagcctgg ggttggatccatgcctgccaaggactatgatttccactgctatggcagac cttttgcactcagttatagaaagtacattaaagtgcagtataaattataa acattttggtttcttaaaaaaaaaagtattgcctttttagttgagtaaaa gtttactgacttccttataaagagtcttgttacaatatgaagctggagct catagctgctttgagtctctccaaagaatagcataatcagcatcaacagt ataaaaagtcctgtagtgagaagttaatttctttatatattttcttacca gagaatcttgaatagagagat
quality values	Open. Hide. 61 31 31 50 61 61 61 43 20 61 61 61 61 61 61 61 61 35 36 61 61 61 55 44 55 61 61 20 17 9 9 21 9 19 19 9 18 28 41 59 59 61 59 61 61 61 59 59 59 59 61 61 59 59 59 61 61 61 61 61 59 55 61 61 61 61 61 61 61 59 59 61 44 34 36 30 32 37 30 39 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 59 61 61 61 61 61 61 61 61 61 61 59 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 59 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 52 55 61 55 61 61 61 61 61 61 61 61 61 55 55 61 55 55 55 61 61 55 61 55 61 55 61 61 61 55 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 55 50 55 50 61 61 61 61 61 61 61 61 61 50 61 61 61 55 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 47 61 61 61 43 53 47 47 47 43 50 50 52 43 61 61 61 53 61 53 61 53 61 37 50 61 61 61 43 39 61 53 61 43 50 53 53 61 61 61 38 50 50 47 50 61 61 53 53 50 53 53 53 53 61 52 61 45 61 61 61 61 61 61 61 50 45 61 47 61 61 61 61 61 35 47 61 61 39 61 61 61 61 57 57 50 53 45 45 53 47 53 45 53 53 43 45 53 53 46 47 53 53 43 42 53 53 45 47 34 53 53 30 50 45 33 45 47 42 33 38 42 42 42 45 42 34 42 42 45 50 57 47 53 53 21 57 50 30 50 38 28 50 22 32 57 50 52 50 28 57 57 30 50 42 32 47 33 53 38 40 39 38 35 12 38 33 40 53 57 57 45 57 37 42 57 50 33 19 38 29 43 53 41 35 41 53 24 37 39 32 52 35 53 42 37 42 50 45 40 33 34 53 52 24 45 23 47 24 44 52 47 34 24 36 34 50 40 38 42 32 34 35 40 28 37 21 53 31 37 42 38 30 29 34 17 21 27 40 29 47 53 40 31 12 33 22 38 23 29 26 21 16 44 25 34 29 40 30 53 53 24 21 35 30 21 39 53 37 40 40 31 14 33 30 26 8 37 26 36 33 40 18 23 44 20 15 23 25 18 9 15 24 17 20 32 20 39 19 28 28 31 30 14 47 14 45 10 8 5 4 8 13 9 26 24 30 25 16 17 32 24 15 36 43 13 30 16 26 9 10 17 18 29 25 13 18 31 29 34 38 31 18 15 9 20 27 15 38 29 28 23 27 34 25 23 14 18 19 21 17 33 32 21 11 11 51 51 21 26 29 39 28 43 26 17 24 13 7 7 5 6 10 19 51 30 8 15 11 23 25 23 15 28 26 26 17 28 23 12 36 21 27 51 23 7 5 12 8 20 21 46 23 46 29 23 6 12 11 41 8 9 22 23 7 7 33 26 6 7 10 32 7 16 20 29 43 12 9 24 8 8 16 9 9 18 38 30 14 9 9 5 8 12 19 38 10 15 20 29 17 20 15 12 22 30 18 31 9 16 7 8 9 8 8 8 11 35 6 13 9 5 22 14 15 25 8 8 9 6 6 20 8 12 9 17 14 17 22 12 29 32 8 6 15 14 5 10 6 6 4 8 14 3 6 3 14 14 16 14 12 10 42 5 5 15 7 5 5 16 17 21 7 6 10 7 5 5 10 26 4 22 7 2 8 7 6 19 17 15 10 17 22 22 7 17 21 24 7 7 6 10 7 20 4 5 13 7 3 4 7 9 6 5 8 7 6 6 6 3 6 8 8	Open. Hide. 61 47 61 55 61 61 35 28 17 21 8 15 27 25 44 36 30 32 40 50 37 59 59 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 59 49 59 61 61 61 61 52 59 59 52 59 59 59 52 49 35 28 30 30 52 52 59 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 59 59 61 59 59 61 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 59 59 52 52 59 59 59 59 59 61 61 61 59 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 59 59 59 59 59 61 59 61 61 61 61 61 59 61 61 61 52 59 59 59 59 59 61 61 59 61 61 59 61 59 59 61 59 61 59 61 59 61 59 61 59 59 59 59 61 61 61 61 61 59 59 59 59 59 61 61 61 59 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 59 59 61 59 61 61 59 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 52 61 61 61 61 61 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 59 61 59 59 52 59 61 61 61 61 61 61 59 59 59 59 59 36 61 61 61 59 61 61 61 61 59 59 59 59 52 59 59 59 59 52 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 59 59 59 61 59 61 61 61 59 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 55 55 55 61 55 61 61 61 61 61 61 61 61 49 61 61 55 55 52 55 61 55 61 55 61 52 55 55 55 50 43 49 61 41 55 61 37 61 55 47 49 50 61 61 61 55 47 55 55 61 50 61 61 61 55 55 55 55 47 39 37 55 55 61 61 55 61 61 39 38 61 55 55 55 55 61 61 55 55 43 52 52 53 45 61 61 50 61 61 38 47 35 39 50 52 61 61 53 61 53 61 61 53 61 61 50 61 29 32 53 40 39 43 32 21 43 40 40 43 39 50 50 52 43 39 53 43 61 45 39 61 50 53 61 61 47 42 61 45 45 27 38 39 38 61 46 34 43 53 61 61 61 53 34 61 40 43 33 37 61 52 50 28 39 53 31 57 57 30 53 34 50 50 45 47 27 24 24 53 53 45 57 53 53 53 36 40 57 53 33 27 45 52 23 39 45 50 53 45 53 40 53 30 42 34 47 43 24 30 35 39 52 38 16 46 45 33 50 24 41 45 50 37 33 30 37 57 47 28 42 15 53 33 37 40 53 53 52 41 32 21 50 33 42 25 21 17 30 36 41 24 45 52 53 34 45 30 41 33 20 42 52 36 53 53 33 42 52 30 30 33 42 40 29 33 57 12 9 53 50 38 30 53 12 14 8 9 8 11 23 29 39 35 37 31 31 17 38 42 32 23 28 37 44 52 46 53 20 15 31 39 29 17 39 11 22 6 45 57 53 29 32 24 37 39 28 31 12 24 22 53 53 35 23 17 45 35 16 20 28 40 25 31 37 41 40 18 5 44 27 37 25 53 33 11 30 20 32 30 24 17 31 14 21 14 30 16 24 13 15 27 22 16 34 28 24 31 38 31 17 10 21 28 35 17 18 29 14 24 33 34 33 28 44 33 21 28 14 23 29 31 28 18 18 18 9 5 4 8 44 31 26 48 14 25 23 29 27 26 11 32 18 29 34 34 25 29 5 5 18 9 5 14 30 18 14 51 43 39 20 7 13 28 16 20 32 16 21 19 20 43 17 13 7 17 8 36 7 20 28 14 51 31 28 21 46 35 33 27 19 29 12 32 29 27 24 13 8 23 12 10 7 5 5 13 7 11 16 30 12 36 43 27 27 31 12 10 6 7 5 12 8 18 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_100673653_100674677
seq2: B6Ng01-066N12.g_68_1088

seq1  GAATTCCTTCATTTTTTGTTTGTTTTTAAATCTTTCTCCAACAAAATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATTTTTTGTTTGTTTTTAAATCTTTCTCCAACAAAATTAA  50

seq1  TGTCAAAATAAGTCAAACAATGGACTGCATGGGTACACTCTAAAGTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATAAGTCAAACAATGGACTGCATGGGTACACTCTAAAGTCATT  100

seq1  GATGCTTTTCTTGATAGGAACTTCACAGAATGAACTTCCCTGACCACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTTTCTTGATAGGAACTTCACAGAATGAACTTCCCTGACCACTCA  150

seq1  CAGTCATGAAATGTGAAGGAGCAAAGTGGACAAATGTATTTTTCCTCGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATGAAATGTGAAGGAGCAAAGTGGACAAATGTATTTTTCCTCGTT  200

seq1  AATTTATAAATAACCATTTTAAGCTTCATCTTATTAGTACTATTGAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAAATAACCATTTTAAGCTTCATCTTATTAGTACTATTGAGTTT  250

seq1  TGGCCTGAATTAAACATAAATCCCTGCCTCATCATCGATCAAGCCCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGAATTAAACATAAATCCCTGCCTCATCATCGATCAAGCCCTTCC  300

seq1  TCCAGCAAATGAAAGCACACAGTTAGCACCTGCTTTGCTTCTCCACACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAAATGAAAGCACACAGTTAGCACCTGCTTTGCTTCTCCACACCA  350

seq1  CTGCCTCCTTCACCTGCCCCTTCCCTTCTAAGGCCACTGCCTGACATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCTTCACCTGCCCCTTCCCTTCTAAGGCCACTGCCTGACATTAG  400

seq1  AAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGCAGGACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGCAGGACTCT  450

seq1  GCTTGCCTGCTTGGGGCACAGATCTGAAAAGCCTTTCGTTCATGGTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTGCTTGGGGCACAGATCTGAAAAGCCTTTCGTTCATGGTGTGA  500

seq1  AGACATTTATACTACACACACTGAAGAAAATGGCAGTGCCTGGAAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTATACTACACACACTGAAGAAAATGGCAGTGCCTGGAAACAGA  550

seq1  TGAGACAGTCTGCACATAAAAAACCCAGCACTGCTATTTTCCTTTCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGTCTGCACATAAAAAACCCAGCACTGCTATTTTCCTTTCAATA  600

seq1  GAAGGATCACTGAAAAGGGGAAGAGTTAGACGAAAACCTGGCAGGCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATCACTGAAAAGGGGAAGAGTTAGACGAAAACCTGGCAGGCATCT  650

seq1  GGGCTTCAAGTGGCCTTTTGTGCAAGGGCACCACCCAATCACAAGCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAAGTGGCCTTTTGTGCAAGGGCACCACCCAATCACAAGCCTGG  700

seq1  GGTTGGATCCATGCCTGCCAAGGACTATGATTTCCACTGCTATGGCAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGATCCATGCCTGCCAAGGACTATGATTTCCACTGCTATGGCAGAC  750

seq1  CTTTTGCACTCAGTTATAGAAAGTACATTAAAGTGCAGTATAAATTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCACTCAGTTATAGAAAGTACATTAAAGTGCAGTATAAATTATAA  800

seq1  ACATTTTGGTTTCTTAAAAAAAAAAAGTATTGCCTTTTTAGTTGAGTAAA  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACATTTTGGTTTCTT-AAAAAAAAAAGTATTGCCTTTTTAGTTGAGTAAA  849

seq1  AGTTTACTGACTTCCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACTGACTTCCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGC  899

seq1  TCATAGCTGCTTTGAGTCTCTCCACAGAATAGCATAATCAGCATCCACAG  950
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TCATAGCTGCTTTGAGTCTCTCCAAAGAATAGCATAATCAGCATCAACAG  949

seq1  TATAAAAAGTCCTTGTAGTGGAGAGTTTAATTTCTTTATATATTTTCTTA  1000
      |||||||||||| |||||| ||||  ||||||||||||||||||||||||
seq2  TATAAAAAGTCC-TGTAGT-GAGAAGTTAATTTCTTTATATATTTTCTTA  997

seq1  CACAGAGATCTTTGAATAGAGAGAT  1025
      | ||||||   ||||||||||||||
seq2  C-CAGAGAATCTTGAATAGAGAGAT  1021

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information