BAC Information

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BAC

Clone NameB6Ng01-067B21
Chromosome1 (Build37)
Map Location 176,830,817 - 176,831,927
singlet/doubletsinglet
Overlap geneGrem2
Upstream geneMnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
Downstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067B21.bB6Ng01-067B21.g
ACCDH886105DH886106
length1,0961,165
definitionDH886105|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B21, 5' end.DH886106|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgatacgcatggcctagcaccatcctcttcaatggaagactggtgtccaa
ctgctctctgaaatgtaccatacctggaggagcccaggtcttcccagggg
cattccttaattcaatgattgacaggtgaagaggatcaatagtaaagtct
ctcaccttgaagcagtaatgagcaatgagatatattttgcactgtttttc
agtgctatcacactggattaagaactcctttccagttggaattgctaaat
tctaggattaatgtctgctttcagggatccttaaactctggtacctactc
atgattactttggcaacagaggttctggcagggtggcctgtaattgctgt
ggcaaaaaacactgtggaaaatttacctagtcagcaagtagatgattgtg
ttcagccatgagccatataacaatgctaccccaaatgaaagactacagag
gtataccacaggagttccagagatgatgacattaaataactcctctgcct
agtcagtgcactctgtgagattggcaactgctcatgtccatcctccctgt
gagaatgacagagcaaacaaacctaaaatgtccccaaatggtgtctccaa
cataccaaggctaagagaatgacatggaaaaggagatgggaatgacctat
gagttggaaggtatggaagagacctttgaagtgctgtcctttagacatgc
ttatttcgagcatgaatttatatagttaattgtactagaccatcaaaagt
tcaggtcagctaagattctggcatagacaaagaggtgctccgcaggccct
tctccttactgagaaactactgacaggtaatttctacagagggaggatca
ttgcttcggggagaggatgcctcatgctctagtgcatggccctacatcca
tgcacatataggcagcactaattggacctactgggctattttattttaaa
gacatgagggtttgagcgggtgccttgtatttgtggggaatagagagtag
actcagtcatatttctttgtatatgtatgaaattctcagatgaggaagct
ttcatacactataacatcacaatatgggtagtgaagactgataaca
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcattagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctgggggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcattgcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatctaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagagtatgccggggcctaacaaac
acagaagtgggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaccct
atagtgacaacattatgaactacatacctcggagctcttgactctagctg
catatatattcaaagatggctagtcggtcatcctgcaaagagagccatga
cttgcaactttaatgccagtacagggaatccaggtcaaaaggggaatgtg
ggtggcacgggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176830817_176831927
seq2: B6Ng01-067B21.b_59_1154

seq1  TGATACGCATGGCCTAGCACCATCCTCTTCAATGGAAGACTGGTGTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACGCATGGCCTAGCACCATCCTCTTCAATGGAAGACTGGTGTCCAA  50

seq1  CTGCTCTCTGAAATGTACCATACCTGGAGGAGCCCAGGTCTTCCCAGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTGAAATGTACCATACCTGGAGGAGCCCAGGTCTTCCCAGGGG  100

seq1  CATTCCTTAATTCAATGATTGACAGGTGAAGAGGATCAATAGTAAAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTAATTCAATGATTGACAGGTGAAGAGGATCAATAGTAAAGTCT  150

seq1  CTCACCTTGAAGCAGTAATGAGCAATGAGATATATTTTGCACTGTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTGAAGCAGTAATGAGCAATGAGATATATTTTGCACTGTTTTTC  200

seq1  AGTGCTATCACACTGGATTAAGAACTCCTTTCCAGTTGGAATTGCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTATCACACTGGATTAAGAACTCCTTTCCAGTTGGAATTGCTAAAT  250

seq1  TCTAGGATTAATGTCTGCTTTCAGGGATCCTTAAACTCTGGTACCTACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATTAATGTCTGCTTTCAGGGATCCTTAAACTCTGGTACCTACTC  300

seq1  ATGATTACTTTGGCAACAGAGGTTCTGGCAGGGTGGCCTGTAATTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACTTTGGCAACAGAGGTTCTGGCAGGGTGGCCTGTAATTGCTGT  350

seq1  GGCAAAAAACACTGTGGAAAATTTACCTAGTCAGCAAGTAGATGATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAAACACTGTGGAAAATTTACCTAGTCAGCAAGTAGATGATTGTG  400

seq1  TTCAGCCATGAGCCATATAACAATGCTACCCCAAATGAAAGACTACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCATGAGCCATATAACAATGCTACCCCAAATGAAAGACTACAGAG  450

seq1  GTATACCACAGGAGTTCCAGAGATGATGACATTAAATAACTCCTCTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACCACAGGAGTTCCAGAGATGATGACATTAAATAACTCCTCTGCCT  500

seq1  AGTCAGTGCACTCTGTGAGATTGGCAACTGCTCATGTCCATCCTCCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCACTCTGTGAGATTGGCAACTGCTCATGTCCATCCTCCCTGT  550

seq1  GAGAATGACAGAGCAAACAAACCTAAAATGTCCCCAAATGGTGTCTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGACAGAGCAAACAAACCTAAAATGTCCCCAAATGGTGTCTCCAA  600

seq1  CATACCAAGGCTAAGAGAATGACATGGAAAAGGAGATGGGAATGACCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAAGGCTAAGAGAATGACATGGAAAAGGAGATGGGAATGACCTAT  650

seq1  GAGTTGGAAGGTATGGAAGAGACCTTTGAAGTGCTGTCCTTTAGACATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGAAGGTATGGAAGAGACCTTTGAAGTGCTGTCCTTTAGACATGC  700

seq1  TTATTTCGAGCATGAATTTATATAGTTAATTGTACTAGACCATCAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCGAGCATGAATTTATATAGTTAATTGTACTAGACCATCAAAAGT  750

seq1  TCAGGTCAGCTAAGATTCTGGCATAGACAAAGAGGTGCTCCGCAGGCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAGCTAAGATTCTGGCATAGACAAAGAGGTGCTCCGCAGGCCCT  800

seq1  TCTCCTTACTGAGAAACTACTGACAGGTAATTTCTACAGAGGGAGGATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACTGAGAAACTACTGACAGGTAATTTCTACAGAGGGAGGATCA  850

seq1  TTGCTTCGGGGAGAGGATGCCTCATGCTCTAGTGCATGGCCCTACATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCGGGGAGAGGATGCCTCATGCTCTAGTGCATGGCCCTACATCCA  900

seq1  TGCACATATAGGCAGCACTAATTGGACCTACTGGGCTATTTTATTTTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCACATATAGGCAGCACTAATTGGACCTACTGGGCTATTTTA-TTTTAA  949

seq1  AGACATGAGGGTTTGGAGCGGGTGCCTTGTATTTTGTGGGGAATAGAGAG  1000
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AGACATGAGGGTTT-GAGCGGGTGCCTTGTA-TTTGTGGGGAATAGAGAG  997

seq1  TAGACTCAGTCATATTTCTTTGTATAATTGTATGAAATTCTCAAGAATGA  1050
      ||||||||||||||||||||||||||  |||||||||||||||   ||||
seq2  TAGACTCAGTCATATTTCTTTGTATA--TGTATGAAATTCTCA--GATGA  1043

seq1  AGAGAGCTTTCTATACACTATAACATCCACAATATGGGTAGTGAAAAGCA  1100
       || ||||||| |||||||||||||| |||||||||||||||||| |   
seq2  GGA-AGCTTTC-ATACACTATAACAT-CACAATATGGGTAGTGAAGA---  1087

seq1  CCTTGATAACA  1111
         ||||||||
seq2  --CTGATAACA  1096