BAC Information

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BAC

Clone NameB6Ng01-067N08
Chromosome1 (Build37)
Map Location 102,919,699 - 102,920,817
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067N08.bB6Ng01-067N08.g
ACCDH886596DH886597
length1,104619
definitionDH886596|Mus musculus domesticus DNA, BAC clone: B6Ng01-067N08, 5' end.DH886597|Mus musculus domesticus DNA, BAC clone: B6Ng01-067N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgaaagaaaatggcctaacttcctatgttttacagtcagaaa
tcagctggcaaatagctcagatgcagccgtgtatttcattctgaaagcaa
gagggatttatacactgaatcactccttatgcccagaagaagaagacaaa
taaggagagagggccatgagcacaggacaggagagaggactttcctatca
gaattgcaaggttatgtgaatgaaaacaatttgagcaacagtggtgacag
aaatggtactctttacttaagcttgcccatactccaggatcaagtatact
cccattccaggaacttgtttgtgctcacaccctctcattggatcctttat
actgcatctatgaagcagttattttgcttattttagagatgaacaaatta
tagtgtgaaaagaccaaggaacttgttcatgattacagaggaggtatgat
ataacaatagatgactccttctcattttcagtgttagacatgctatgatt
gagccaccaagctcccgtgaccctgttagtgaagtacagcaaatagtgag
gccaatctctggttataggaggtctttattcagtaagctgattaattcca
ttagcatttaagaagggaaaatatcagtagcaacctcatcaaattatcac
taacaatttacatgtgaagtatactcttcatctagggacaaaatgtccca
catgtttttgtttgcatctcttgagtgtctgtcatgtgtattaggtagta
attaaccgtggtgtcctctgattaaaataattcttgtgcttcaaaagaac
tgtcacatatctgtagcaggtgacagtttcctagcttgtttgtgaatagc
aggcagtgtggactaggtctattggaagattaccatgcaagcagaccagc
acggattggtatatagcacaatttggtatagaaacacaaattcttaactt
ttccctaaaattgaaggcagtctttgagtcatgacataaagctttagtca
ctccagagatatagatgagtatctttaaatgattacagcagcatcatgag
caaaggtttcttcatttacttcttaataatcagtccttcaaaaagtgact
gaat

gaattcctgatctttccatgacttttaacatgaaggagtgttatatttgt
caaatatattttcatcatctaatgaggtgatcatgtgaggtttttttttt
ttttttttttttttagtttctttatatactgaattacatcattaatggat
ttttctattttgaatcaaccttgcatcactgggataaagcctacttaatg
gtagtgaattatagtttgatgtggtcttggattcacatttttagaatttt
attgagtgtttttgcattggtattcataagcaaatttggtctgaagtttt
ttctctttgttgagtctttgtgttatttatgtatcagagtaaatgtggct
tcatagaacaaattaggtagtgttctttctgtttctgttttatggaatag
tttgaggagtgttagttttagatcttctttgaaggtcgggtagacttctg
tactaaagcttcctgactctgggatttttcttgttgttgctgggagggtt
ttaatgatttcttccatttccttaaaggatatgtgaaagcttaaatggtt
tagctgcacttgatttaactttagtacacattgtctgtctagaaaatcat
ccgttttcatctagatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102919699_102920817
seq2: B6Ng01-067N08.b_50_1153

seq1  GAATTCAATGAAAGAAAATGGCCTAACTTCCTATGTTTTACAGTCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAAAGAAAATGGCCTAACTTCCTATGTTTTACAGTCAGAAA  50

seq1  TCAGCTGGCAAATAGCTCAGATGCAGCCGTGTATTTCATTCTGAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGCAAATAGCTCAGATGCAGCCGTGTATTTCATTCTGAAAGCAA  100

seq1  GAGGGATTTATACACTGAATCACTCCTTATGCCCAGAAGAAGAAGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATTTATACACTGAATCACTCCTTATGCCCAGAAGAAGAAGACAAA  150

seq1  TAAGGAGAGAGGGCCATGAGCACAGGACAGGAGAGAGGACTTTCCTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAGAGGGCCATGAGCACAGGACAGGAGAGAGGACTTTCCTATCA  200

seq1  GAATTGCAAGGTTATGTGAATGAAAACAATTTGAGCAACAGTGGTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCAAGGTTATGTGAATGAAAACAATTTGAGCAACAGTGGTGACAG  250

seq1  AAATGGTACTCTTTACTTAAGCTTGCCCATACTCCAGGATCAAGTATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTACTCTTTACTTAAGCTTGCCCATACTCCAGGATCAAGTATACT  300

seq1  CCCATTCCAGGAACTTGTTTGTGCTCACACCCTCTCATTGGATCCTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCCAGGAACTTGTTTGTGCTCACACCCTCTCATTGGATCCTTTAT  350

seq1  ACTGCATCTATGAAGCAGTTATTTTGCTTATTTTAGAGATGAACAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCTATGAAGCAGTTATTTTGCTTATTTTAGAGATGAACAAATTA  400

seq1  TAGTGTGAAAAGACCAAGGAACTTGTTCATGATTACAGAGGAGGTATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGAAAAGACCAAGGAACTTGTTCATGATTACAGAGGAGGTATGAT  450

seq1  ATAACAATAGATGACTCCTTCTCATTTTCAGTGTTAGACATGCTATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATAGATGACTCCTTCTCATTTTCAGTGTTAGACATGCTATGATT  500

seq1  GAGCCACCAAGCTCCCGTGACCCTGTTAGTGAAGTACAGCAAATAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCAAGCTCCCGTGACCCTGTTAGTGAAGTACAGCAAATAGTGAG  550

seq1  GCCAATCTCTGGTTATAGGAGGTCTTTATTCAGTAAGCTGATTAATTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCTCTGGTTATAGGAGGTCTTTATTCAGTAAGCTGATTAATTCCA  600

seq1  TTAGCATTTAAGAAGGGAAAATATCAGTAGCAACCTCATCAAATTATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTAAGAAGGGAAAATATCAGTAGCAACCTCATCAAATTATCAC  650

seq1  TAACAATTTACATGTGAAGTATACTCTTCATCTAGGGACAAAATGTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTTACATGTGAAGTATACTCTTCATCTAGGGACAAAATGTCCCA  700

seq1  CATGTTTTTGTTTGCATCTCTTGAGTGTCTGTCATGTGTATTAGGTAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTTGTTTGCATCTCTTGAGTGTCTGTCATGTGTATTAGGTAGTA  750

seq1  ATTAACCGTGGTGTCCTCTGATTAAAATAATTCTTGTGCTTCAAAAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCGTGGTGTCCTCTGATTAAAATAATTCTTGTGCTTCAAAAGAAC  800

seq1  TGTCACATATCTGTAGCAGGTGACAGTTTCCTAGCTTGTTTGTGAATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATATCTGTAGCAGGTGACAGTTTCCTAGCTTGTTTGTGAATAGC  850

seq1  AGGCAGTGTTGGACTAGGTCTATTGGAAGACTTACCATGCAAGCAGACCA  900
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AGGCAGTG-TGGACTAGGTCTATTGGAAGA-TTACCATGCAAGCAGACCA  898

seq1  GCACGGATTGGTATATAGCACAATTTGGTATAGAAACACAAAATTCTTAA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCACGGATTGGTATATAGCACAATTTGGTATAGAAACAC-AAATTCTTAA  947

seq1  CTTTTCCCTAAAATTGAAGGCAGTCTTTGAGGTCATGACATAAAGCTTTA  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTTTCCCTAAAATTGAAGGCAGTCTTTGA-GTCATGACATAAAGCTTTA  996

seq1  GTCACTCCAGAGATATTAGATGAAGTAATCTTTAAAATGATTACAGCAGG  1050
      ||||||||||||||| |||||| ||| |||||| |||||||||||||| |
seq2  GTCACTCCAGAGATA-TAGATG-AGT-ATCTTT-AAATGATTACAGCA-G  1041

seq1  CATCATGAGCAAAGGTATTCTTTCATTTACTTCTTTAAATAATCAGTCCT  1100
      |||||||||||||||| ||| ||||||||||||||  |||||||||||||
seq2  CATCATGAGCAAAGGT-TTC-TTCATTTACTTCTT--AATAATCAGTCCT  1087

seq1  TCAAAAAAAGTGACTGAAT  1119
      ||  |||||||||||||||
seq2  TC--AAAAAGTGACTGAAT  1104


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