BAC Information

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BAC

Clone NameB6Ng01-068H08
Chromosome1 (Build37)
Map Location 48,370,035 - 48,370,592
singlet/doubletsinglet
Overlap genenone
Upstream geneEG227061, LOC666869
Downstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068H08.bB6Ng01-068H08.g
ACCDH887039DH887040
length1,274558
definitionDH887039|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H08, 5' end.DH887040|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacta
gtagccaacatcaaagtaaatggagagaagctagaagcaatcccactaaa
atgagggcctagacaaggctgccctctttctccctacctattcaatattg
tatttgaagttctatccagagtaattcgacaaaaataaataaataaataa
ataaataaataaataaataaataaataaataaataaataaaaagtacatc
aaggggatacaatttggaaaggaagaagtcaaaatatcactttttgcaga
tgatatgatagtatatataagtgaccctaaaaattccaccagagaactct
taaacttgataaaaatcttcagtgaagtagctggatataaaattaactca
aacaaatcaatgggctttctctacacaaaggataaacagactgataaaga
aattagggaaacaacatccttctcaatagtcacaaacaatataaaatacc
ttggtgtaactctaactgaggaagtgaaagatctgtatgataagaacttc
aagtctctgaagaaagaaattgaagaaaatctcagaagatggaaagatct
cccatgctcattgattggcaagattaatatagtaaaaatggctatcttgc
ctaaagcaatctacagattcaatgcaatccccatcaaaattccaactcaa
ttcttcactgagatagaaatggcaatttgcaattgcatctggagtaataa
aaaacctaggataggaaaaattattctcaacaataaaaaacctctgatgg
aatcaccctgcctgacattaagctgtactacacagagcaattgtggttaa
aaactgcatggtacttgtacagtgacagataggtagatcatttggaatag
aattgaacccaaaaatgaaaccacacacctatggtcacttgatatttgac
aagggtgctaaaccatccagcgggaaaagttagcattttcaacaaatggt
gctggcacaactggtggatatcatatagagattgtgaattgtgccattct
tatctctgtacaagctcaggtctaaaggatcaagacttcactagactgaa
ttaatagggaaaagtgaggaaatctaaaagaatgggcgaggtaattctaa
acgatagcatgttgtgcgtagatctaaatgacatgggacgcataaattgc
aagcttgtagcaagacctgtcatgaataagcccatcaattgggagatctt
acggctacaccgttaaggggccat
gaattccataataccaggaagggcctagggtgctctccctactctcttga
atacaaataaagtttgctgtacccacaaaaaatgtagaactgtataaaag
aaaataagaaactaattaaaatatgtaaaactgtgtaaaataaggtactt
tttaataaaaggaaatacataaatttcactttttgttttaaaaatgtaaa
ttgttggggtctttttttctttattttcttttaataatgtgatacattct
tttcttaggcactagtgtttgacttccaatggaaaggtacagcacaatgc
tactaaatttgtagtataaatgtttgaatctgcaatgcaacaaagtgaat
tattttaaataactttgggaaataaaagaaataatttatatgaaagtatg
aagaatattaagaagatttttagctataatttgacatccaataacatttt
cctgcaaatctcaaggttttaggatattatagtcatttgtacttacataa
ctactaccatgaatcttgaaggaaaacagaacatttatgtttctaaagcc
atataatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48370035_48370592
seq2: B6Ng01-068H08.g_69_626 (reverse)

seq1  GATTATATGGCTTTAGAAACATAAATGTTCTGTTTTCCTTCAAGATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATGGCTTTAGAAACATAAATGTTCTGTTTTCCTTCAAGATTCAT  50

seq1  GGTAGTAGTTATGTAAGTACAAATGACTATAATATCCTAAAACCTTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAGTTATGTAAGTACAAATGACTATAATATCCTAAAACCTTGAGA  100

seq1  TTTGCAGGAAAATGTTATTGGATGTCAAATTATAGCTAAAAATCTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGGAAAATGTTATTGGATGTCAAATTATAGCTAAAAATCTTCTTA  150

seq1  ATATTCTTCATACTTTCATATAAATTATTTCTTTTATTTCCCAAAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTCATACTTTCATATAAATTATTTCTTTTATTTCCCAAAGTTAT  200

seq1  TTAAAATAATTCACTTTGTTGCATTGCAGATTCAAACATTTATACTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAATTCACTTTGTTGCATTGCAGATTCAAACATTTATACTACAA  250

seq1  ATTTAGTAGCATTGTGCTGTACCTTTCCATTGGAAGTCAAACACTAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAGCATTGTGCTGTACCTTTCCATTGGAAGTCAAACACTAGTGC  300

seq1  CTAAGAAAAGAATGTATCACATTATTAAAAGAAAATAAAGAAAAAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAAGAATGTATCACATTATTAAAAGAAAATAAAGAAAAAAAGAC  350

seq1  CCCAACAATTTACATTTTTAAAACAAAAAGTGAAATTTATGTATTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAATTTACATTTTTAAAACAAAAAGTGAAATTTATGTATTTCCTT  400

seq1  TTATTAAAAAGTACCTTATTTTACACAGTTTTACATATTTTAATTAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAAAGTACCTTATTTTACACAGTTTTACATATTTTAATTAGTTT  450

seq1  CTTATTTTCTTTTATACAGTTCTACATTTTTTGTGGGTACAGCAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTCTTTTATACAGTTCTACATTTTTTGTGGGTACAGCAAACTTT  500

seq1  ATTTGTATTCAAGAGAGTAGGGAGAGCACCCTAGGCCCTTCCTGGTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTCAAGAGAGTAGGGAGAGCACCCTAGGCCCTTCCTGGTATTA  550

seq1  TGGAATTC  558
      ||||||||
seq2  TGGAATTC  558