BAC Information

Click to search

BAC

Clone NameB6Ng01-068M09
Chromosome1 (Build37)
Map Location 18,151,216 - 18,151,985
singlet/doubletsinglet
Overlap genenone
Upstream geneGdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15, Crispld1, LOC665564, LOC100040126, Crisp4
Downstream geneEG574082, EG654460, Defb17, LOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068M09.bB6Ng01-068M09.g
ACCDH887264DH887265
length1,0101,186
definitionDH887264|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M09, 5' end.DH887265|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttggaattttttaaccagacaacactattgaaccgatagtaac
agaataacatgtccacaacaggagagtagatttttctttgctatgtttca
aaaatatctgtaaagaccaaaacctaaggagtgagttgaaaagagattta
ttccatctacatcacatttagctatatacccataggattctaaatgagca
caccatataaatacatccatattatgcttagcatagtactactcagagta
tccaggaataaagtgaatgtatacacccataatcaaaataataataataa
taataaagactatacatatgactctatctccaagtgatctaatctttctt
ctgatatctgtgggtacctacaaacatgtggcaaatacactctaagatac
atgtacctcatataaataaaaaataaaaataaggtttaaaaaatatattt
tgtgggtagtagagtatgagagtagggtagctgaggaacacagggatagg
taatctacattaaagacatttcaaaagtcatataggaaacttctattgta
gaaacttcctaatatatcacatacataaaaacagtttaaaattaacttat
taaatagtaatgatgcctcttccagataatgaaggacaataaattaaaga
cctagggaaagaaatgggtttcctcaatttctactggctagctttcttcg
gtgctagaagattctatgcacatttttggaaaagcagtattgaacaaact
cctagcaacttatccttattccaatagattaggacatctcctaaccctca
ttagagaatacttcttttgctctagatagtgattatcatgaaaaaaaaac
cccacaatccatcatggtataggaaataggagacttcagaatgctcagcc
ttaacaggacatccttagcatactcctcaccctcatctctcaggatcatt
gtaacagattgtaaaagagaaacacagccagatttgtcacacttcaagga
acttttcggg
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctccgggcagtcggtttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gaggcaatgcgcagagaggcaatgcgcagagaggcagtgctcagagaggc
agtgcgcagagagacagtgcgcagagaggcagtgcgcagactcattcatt
cccagagaggaacaaaggaaaatacaacaggcatttccagtctttgaagg
agccgagggtgggcgtgtccacgctccggtagaatacgtgcagattaaag
aactcgccgagtcggtccgtaaatacggaaccaatgctaattttaccttg
gtgcagttagacaggcttgccggcatggcactaacccctgccgactggca
aacgattgtaaaagccgctctccctagtatgggcaaatatatggaatgga
gagcgctttggcacgaggctgcacaagcgcaggcccgagcaaacgcagct
gctttgactccagagcagagagattggacttttgacttgttaacgggtca
gggagcttattctgctgatcagacaaactaccattggggagcttatgccc
aaatttcctccacggctattagggcctggaaggcgctctcccgagcaggt
gaagccactgggcagttaacaaagataatccagggacctcaggagtcctt
ctcagattttgtggccagaatgacagaggcagcagagcgtatttttggag
agtcagagcaagccgcgcctctgatagaacagctcatctatgagcaagcc
acaaggagtgcgagcggccatagcctcatgaaagaacaaaggcttacaga
ctggctcaggtttgtcgagagcttggggacttctcagcatgcagtttacg
gctgcaatcttcaatcccaaaccgctcatgggcagaaggatgaggaaatg
tttaactgcggaaagctggcatttagaaagattgccaagtccgataacgg
aggacctgctcttgtctaggtgtgccagggttactagagcaatgtcctct
ggagaataaggcaactcttccccacgataaccatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_18151216_18151985
seq2: B6Ng01-068M09.b_45_814 (reverse)

seq1  AATAAGGATAAGTTGCTAGGAGTTTGTTCAATACTGCTTTTCCAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGATAAGTTGCTAGGAGTTTGTTCAATACTGCTTTTCCAAAAATG  50

seq1  TGCATAGAATCTTCTAGCACCGAAGAAAGCTAGCCAGTAGAAATTGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGAATCTTCTAGCACCGAAGAAAGCTAGCCAGTAGAAATTGAGGA  100

seq1  AACCCATTTCTTTCCCTAGGTCTTTAATTTATTGTCCTTCATTATCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATTTCTTTCCCTAGGTCTTTAATTTATTGTCCTTCATTATCTGGA  150

seq1  AGAGGCATCATTACTATTTAATAAGTTAATTTTAAACTGTTTTTATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATCATTACTATTTAATAAGTTAATTTTAAACTGTTTTTATGTAT  200

seq1  GTGATATATTAGGAAGTTTCTACAATAGAAGTTTCCTATATGACTTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATATTAGGAAGTTTCTACAATAGAAGTTTCCTATATGACTTTTGA  250

seq1  AATGTCTTTAATGTAGATTACCTATCCCTGTGTTCCTCAGCTACCCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTTAATGTAGATTACCTATCCCTGTGTTCCTCAGCTACCCTACT  300

seq1  CTCATACTCTACTACCCACAAAATATATTTTTTAAACCTTATTTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACTCTACTACCCACAAAATATATTTTTTAAACCTTATTTTTATTT  350

seq1  TTTATTTATATGAGGTACATGTATCTTAGAGTGTATTTGCCACATGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATATGAGGTACATGTATCTTAGAGTGTATTTGCCACATGTTTG  400

seq1  TAGGTACCCACAGATATCAGAAGAAAGATTAGATCACTTGGAGATAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCCACAGATATCAGAAGAAAGATTAGATCACTTGGAGATAGAGT  450

seq1  CATATGTATAGTCTTTATTATTATTATTATTATTTTGATTATGGGTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATAGTCTTTATTATTATTATTATTATTTTGATTATGGGTGTAT  500

seq1  ACATTCACTTTATTCCTGGATACTCTGAGTAGTACTATGCTAAGCATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCACTTTATTCCTGGATACTCTGAGTAGTACTATGCTAAGCATAAT  550

seq1  ATGGATGTATTTATATGGTGTGCTCATTTAGAATCCTATGGGTATATAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTATTTATATGGTGTGCTCATTTAGAATCCTATGGGTATATAGC  600

seq1  TAAATGTGATGTAGATGGAATAAATCTCTTTTCAACTCACTCCTTAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGATGTAGATGGAATAAATCTCTTTTCAACTCACTCCTTAGGTT  650

seq1  TTGGTCTTTACAGATATTTTTGAAACATAGCAAAGAAAAATCTACTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTTACAGATATTTTTGAAACATAGCAAAGAAAAATCTACTCTCC  700

seq1  TGTTGTGGACATGTTATTCTGTTACTATCGGTTCAATAGTGTTGTCTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGACATGTTATTCTGTTACTATCGGTTCAATAGTGTTGTCTGGT  750

seq1  TAAAAAATTCCAAGGAATTC  770
      ||||||||||||||||||||
seq2  TAAAAAATTCCAAGGAATTC  770