BAC Information

Click to search

BAC

Clone NameB6Ng01-069D13
Chromosome1 (Build37)
Map Location 115,855,153 - 115,856,269
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069D13.bB6Ng01-069D13.g
ACCDH887594DH887595
length1,0971,054
definitionDH887594|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D13, 5' end.DH887595|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgctgaattcctactgaattccatgttgtcggtttcaaggtct
tactaggatgttggaacaatggcgaaggcttaactatgccagaatttaat
cttaaaagacacttataataagataatactaaaagagagcacacggatcc
atacaccagactaactcggggatagggtaagaatgtacgggttatgagaa
tgccaaagttccaggaggtgagtttcagtgaaactctttgccttgtgagt
gttctcaggcctcttggcctgccaagcaaactttactggagtgtgcatag
cattctctctcatttttatatgactgccgaagttccggaatgtcccgcct
cgtcgtagctatagatgaagatgagtggaaacacaacgatttactaataa
accaatgccaataataatagcaagtaggattatatattgaacccaatcca
ggggattcaatgcactcaggttctcttttcaatctctggccaatttatca
atgttccaagtgtccaagtgactattgataatatctgaaatttctgcctt
tctagccttaatatatgttatgtcttgccctattgttaagactactactt
ctaagacattaatctttgcctccaattctttacatggctctaggcaagta
cctctgtctagattgatatgattctgagatttgggtgtccgtctagactg
cctggccctcatagcaaccttaattccaaatgagaccaaaagccacaata
tgtactggaattcttcttgaatgaagataataactgccacctgcttggat
gcagggatgcatgcctgttgcagtcagctgaagggcgttgactgacctgc
ttgagaaacaaagtccagagagtgaaaggcacagtacaaaagcttctttt
gcagaagtccaggtactccattcaattgcaaattagcaacaatcaagctt
agacttagagctctcagtgttggggaggtgaccttgagatcacagaaagc
tgcatctttctgcagaggaggctgtgtctaattactttgtaagtaataga
atatttgtatctccctgggaactctatctggattatactagacagtc
gaattcacatatcccttccaaaagaaaagttaatgaataattgtagtatg
agaaagaactagttcccacacttactgagatcttctgctgtgttatcaat
gagatctggtttcatctactatgggatgatactgcaagtctgatttactc
cttactaaggcttttactgaaaatcaaagatgtagtatcatcattgaaag
aagactgggcaaagagaggccccacaagaaaactgaattaaggtatagga
agaactaggggaaaggactcaactagtagataacttatctagcatctaca
agaacctgaatttaataccataaatcacttatattttgtatattgtagtg
tatacttgtttttttcttttattgaaaatagttttttcccaattttttat
taggtattttcttcatttacatttcaaatgctatcccgaaagtccccata
ccctccccgaccatgctctcctacccacccctcccacttcttgcctctgg
tgttccccagtactggggcataggcatataaagtttgcaagaccaagggg
cctctcttcccaatgatggctgactaggctatcttctgctacctatgcag
ctagagacatgagctttgggggtactggttagttcatattgttgttccac
ctatagggttgcagaccccttaagctccttgagtactttctccagatcct
ccattgggggccctgtgatccatccaatagctgactgtgagcatccactt
ctgtgttgccaggcacctgcatagcctcacaaaagacagctatatcaggt
cctttcatcaaaatcttgctggtatatgcaatggtgtctttgtttggagg
tgattatgggatggatccctgggtgtggcagtctctagatggtctatcct
ttcgtctcgctccaactttgtctcttaactctccagggtggttggtccca
atctagaggggtgaagtgtccacacttggttgcatctctgagtttcatgt
gtttggaaatggactgggatctagttctcgcctaatccactacactgagc
tatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115855153_115856269
seq2: B6Ng01-069D13.b_47_1143

seq1  GAATTCCTGCTGAATTCCTACTGAATTCCATGTTGTCGGTTTCAAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTGAATTCCTACTGAATTCCATGTTGTCGGTTTCAAGGTCT  50

seq1  TACTAGGATGTTGGAACAATGGCGAAGGCTTAACTATGCCAGAATTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGATGTTGGAACAATGGCGAAGGCTTAACTATGCCAGAATTTAAT  100

seq1  CTTAAAAGACACTTATAATAAGATAATACTAAAAGAGAGCACACGGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGACACTTATAATAAGATAATACTAAAAGAGAGCACACGGATCC  150

seq1  ATACACCAGACTAACTCGGGGATAGGGTAAGAATGTACGGGTTATGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCAGACTAACTCGGGGATAGGGTAAGAATGTACGGGTTATGAGAA  200

seq1  TGCCAAAGTTCCAGGAGGTGAGTTTCAGTGAAACTCTTTGCCTTGTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGTTCCAGGAGGTGAGTTTCAGTGAAACTCTTTGCCTTGTGAGT  250

seq1  GTTCTCAGGCCTCTTGGCCTGCCAAGCAAACTTTACTGGAGTGTGCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGGCCTCTTGGCCTGCCAAGCAAACTTTACTGGAGTGTGCATAG  300

seq1  CATTCTCTCTCATTTTTATATGACTGCCGAAGTTCCGGAATGTCCCGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCTCATTTTTATATGACTGCCGAAGTTCCGGAATGTCCCGCCT  350

seq1  CGTCGTAGCTATAGATGAAGATGAGTGGAAACACAACGATTTACTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGTAGCTATAGATGAAGATGAGTGGAAACACAACGATTTACTAATAA  400

seq1  ACCAATGCCAATAATAATAGCAAGTAGGATTATATATTGAACCCAATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGCCAATAATAATAGCAAGTAGGATTATATATTGAACCCAATCCA  450

seq1  GGGGATTCAATGCACTCAGGTTCTCTTTTCAATCTCTGGCCAATTTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTCAATGCACTCAGGTTCTCTTTTCAATCTCTGGCCAATTTATCA  500

seq1  ATGTTCCAAGTGTCCAAGTGACTATTGATAATATCTGAAATTTCTGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCAAGTGTCCAAGTGACTATTGATAATATCTGAAATTTCTGCCTT  550

seq1  TCTAGCCTTAATATATGTTATGTCTTGCCCTATTGTTAAGACTACTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTTAATATATGTTATGTCTTGCCCTATTGTTAAGACTACTACTT  600

seq1  CTAAGACATTAATCTTTGCCTCCAATTCTTTACATGGCTCTAGGCAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACATTAATCTTTGCCTCCAATTCTTTACATGGCTCTAGGCAAGTA  650

seq1  CCTCTGTCTAGATTGATATGATTCTGAGATTTGGGTGTCCGTCTAGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTAGATTGATATGATTCTGAGATTTGGGTGTCCGTCTAGACTG  700

seq1  CCTGGCCCTCATAGCAACCTTAATTCCAAATGAGACCAAAAGCCACAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCCTCATAGCAACCTTAATTCCAAATGAGACCAAAAGCCACAATA  750

seq1  TGTACTGGAATTCTTCTTGAATGAAGATAATAACTGCCACCTGCTTGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGAATTCTTCTTGAATGAAGATAATAACTGCCACCTGCTTGGAT  800

seq1  GCAGGGATGCATGCCTGTTGCAGTCAGGCTGAAGGGCGTTGACTGACCTG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAGGGATGCATGCCTGTTGCAGTCA-GCTGAAGGGCGTTGACTGACCTG  849

seq1  CTTGAGAAACAAAGTCCAGAGAGTGAAAGGCACAGTACAAAAGCTTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAACAAAGTCCAGAGAGTGAAAGGCACAGTACAAAAGCTTCTTT  899

seq1  TGCAGAAGTCCAGGTACTCCATTCAATTGCAAATTAGCAACAATCAAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGTCCAGGTACTCCATTCAATTGCAAATTAGCAACAATCAAGCT  949

seq1  TAGACTTAGAGCTCCCAGTGTTGGGGAGGTGACCTTGAGAATCACAGAAA  1000
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TAGACTTAGAGCTCTCAGTGTTGGGGAGGTGACCTTGAG-ATCACAGAAA  998

seq1  GGCTGCAATCTTTCTGCAAGAGGAGGCTGTGTTCTAATTTACCTTTGTTA  1050
       ||||| |||||||||| ||||||||||||| |||||||   ||||| ||
seq2  -GCTGC-ATCTTTCTGC-AGAGGAGGCTGTG-TCTAATT--ACTTTG-TA  1041

seq1  AGTAATTAAGAATATTTTGTTATCTTCCCTGGGATACTCTAATACTGGAA  1100
      ||||||  |||||||||   |||| ||||||||| ||||||   |||| |
seq2  AGTAAT--AGAATATTT--GTATC-TCCCTGGGA-ACTCTA--TCTGG-A  1082

seq1  TTATTACTAGACCAGTC  1117
      ||| ||||||| |||||
seq2  TTA-TACTAGA-CAGTC  1097