BAC Information

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BAC

Clone NameB6Ng01-069F14
Chromosome1 (Build37)
Map Location 75,498,261 - 75,499,178
singlet/doubletsinglet
Overlap geneAW822216
Upstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik
Downstream geneInha, Stk11ip, Slc4a3, LOC100039069, LOC383531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F14.bB6Ng01-069F14.g
ACCDH887687DH887688
length9121,228
definitionDH887687|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F14, 5' end.DH887688|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcaccactgagctatacccccagcccaactgcaaagcaaaac
atgccaaagaacggcgatgaggctgatgagcccaagagaagctctatatg
ctaggagttggaaagcgcccttctgagtgtctgagctctctatctgagcc
catcatgaacacctcttactcttccagcccagctgtgggaaacagccacc
gcatccgcctcgcttggcaaacacgacttctgtgctttgaacctatctgc
ctaggtgtccaccagttaccaaccttggatagtgagggcagcagagtctt
gcacaccagggcagctgaagccaaccagggccccactgtcccggtgcttg
acagcttgcaggatgagcctgtgctggaggcccttctgctctatgcggta
ccgcagggctccaggctccacctggccctctggctcattactctggagct
gctctccattaaggaaccaagagccctggatgatggcggacagatcaagg
gagaagacggcatcttccccatcatatacctgcacgtcttccaggcctga
caccaggcgagctgtgggcactggaacagagacagggcacggctgttaga
accagaaagggctgagcacggggtccccaatggaggagttagaggaagga
ctgaaggagctgaaggggtttgcaaccccataggaagaacaataatatca
accacccagactccccagagctcccaggaactaaaccactaaccaacgag
gacacatggaggggacccatggctccagccacatatgtagcagaggatgc
cttgtgggcatcaatgggaagagaggcccttggtcctgtgaaggctctat
agatatcccaatgtagggaattcagggtggggaacacccttatagaagca
gggaggggtatg
gaattctttgtttagctctgtgccctatttttttaatggggttatttgat
ttttctggagtccagcttcttgagttctttgtatatattggaaattagtc
ccctatcagatttaggattggtaaaaattctttcccaatctgttggtggc
ctttttgtcttattgacagtgtcttttgccttacagaagcttttcaattt
tatgaggtcccatttgtcaattctcaattttacagcacaagccattgctg
ttctgttcaggaatttttcctcagtgcccttatctttgaggcttttcccc
actttctgctcagtgcagtagctggatataaaattaactcaaacaaatca
atggcctttctctacacaaagggtaaacaggctgagaaagaaattaggga
aacaacacccttcacaatggtcacaaataatataaagtaccttggtgtga
ctctaactaaggaagtgaaagatctgtatgataagaatttcaagtctctg
aagaaagaaatcgaagatcttagaagatggaaagatctccaatgctcatg
gattcaaaggattaatatagtaaaaatggctatcctgccaaaagcaatct
acagatttaattcaatccccatcaaaactccaactcaattcttcacagag
ttagaaagggcaattttcaaattcacctggaataacaaaaaacctaggat
agcaaaaactattctcaacaataaaagaacctctggtggaatcaccatgc
ctgacctcaagctgtactacagagcaattgtgataaaaactgcttgggta
ctggtacaacgacagacaggtagatcaatggaatagaattgaagacccag
aaatgacccctcacacctatggtcactgatctttgacaaggagctaaaac
catccagtggaaaaatgacagcattttcacaaatggtgctggctcaactg
gcagtattatgtagaagaatccaaattgatccattcttatctctgtacaa
agctcagactagtggatcaggacttcactaaaaacagaggctctctctat
tcttacggagactcaggaaccccaccgccatggccccccactcatggcct
ccccgcatggccagcctctcgaaacatcattcgatcagtgtgctctccac
cttccactccccctctgcaacactatttcggtgatctccatccttcgaaa
tcacattcccacctcgtaactctctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75498261_75499178
seq2: B6Ng01-069F14.b_51_962

seq1  GAATTCACTCACCACTGAGCTATACCCCCAGCCCAACTGCAAAGCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACCACTGAGCTATACCCCCAGCCCAACTGCAAAGCAAAAC  50

seq1  ATGCCAAAGAACGGCGATGAGGCTGATGAGCCCAAGAGAAGCTCTATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAAGAACGGCGATGAGGCTGATGAGCCCAAGAGAAGCTCTATATG  100

seq1  CTAGGAGTTGGAAAGCGCCCTTCTGAGTGTCTGAGCTCTCTATCTGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTTGGAAAGCGCCCTTCTGAGTGTCTGAGCTCTCTATCTGAGCC  150

seq1  CATCATGAACACCTCTTACTCTTCCAGCCCAGCTGTGGGAAACAGCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGAACACCTCTTACTCTTCCAGCCCAGCTGTGGGAAACAGCCACC  200

seq1  GCATCCGCCTCGCTTGGCAAACACGACTTCTGTGCTTTGAACCTATCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCGCCTCGCTTGGCAAACACGACTTCTGTGCTTTGAACCTATCTGC  250

seq1  CTAGGTGTCCACCAGTTACCAACCTTGGATAGTGAGGGCAGCAGAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGTCCACCAGTTACCAACCTTGGATAGTGAGGGCAGCAGAGTCTT  300

seq1  GCACACCAGGGCAGCTGAAGCCAACCAGGGCCCCACTGTCCCGGTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCAGGGCAGCTGAAGCCAACCAGGGCCCCACTGTCCCGGTGCTTG  350

seq1  ACAGCTTGCAGGATGAGCCTGTGCTGGAGGCCCTTCTGCTCTATGCGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGCAGGATGAGCCTGTGCTGGAGGCCCTTCTGCTCTATGCGGTA  400

seq1  CCGCAGGGCTCCAGGCTCCACCTGGCCCTCTGGCTCATTACTCTGGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGGGCTCCAGGCTCCACCTGGCCCTCTGGCTCATTACTCTGGAGCT  450

seq1  GCTCTCCATTAAGGAACCAAGAGCCCTGGATGATGGCGGACAGATCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCATTAAGGAACCAAGAGCCCTGGATGATGGCGGACAGATCAAGG  500

seq1  GAGAAGACGGCATCTTCCCCATCATATACCTGCACGTCTTCCAGGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACGGCATCTTCCCCATCATATACCTGCACGTCTTCCAGGCCTGA  550

seq1  CACCAGGCGAGCTGTGGGCACTGGAACAGAGACAGGGCACGGCTGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCGAGCTGTGGGCACTGGAACAGAGACAGGGCACGGCTGTTAGA  600

seq1  ACCAGAAAGGGCTGAGCACGGGGTCCCCAATGGAGGAGTTAGAGGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAGGGCTGAGCACGGGGTCCCCAATGGAGGAGTTAGAGGAAGGA  650

seq1  CTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAACAATAATATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAACAATAATATCA  700

seq1  ACCACCCAGACTCCCCAGAGCTCCCAGGAACTAAACCACTAACCAACGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCAGACTCCCCAGAGCTCCCAGGAACTAAACCACTAACCAACGAG  750

seq1  GACACATGGAGGGGACCCATGGCTCCAGCCACATATGTAGCAGAGGATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGAGGGGACCCATGGCTCCAGCCACATATGTAGCAGAGGATGC  800

seq1  CTTGTTGGGCATCAATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCTA  850
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTG-TGGGCATCAATGGGAAGAGAGGCCCTTGGTCCTGTGAAGGCTCTA  849

seq1  TAGATATCCCAATGTAGGGGAATTCAGGGGTGGGGGAACACCCTTATAGA  900
      |||||||||||||||| ||||||||||||   ||||||||||||||||||
seq2  TAGATATCCCAATGTA-GGGAATTCAGGG--TGGGGAACACCCTTATAGA  896

seq1  AGCAGGGGAGGGGGTATG  918
      |||||||   ||||||||
seq2  AGCAGGG--AGGGGTATG  912