BAC Information

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BAC

Clone NameB6Ng01-069P10
Chromosome1 (Build37)
Map Location 153,495,914 - 153,680,266
singlet/doubletdoublet
Overlap geneNiban, Edem3
Upstream geneEG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2
Downstream gene1700025G04Rik, LOC668076, 5730449L18Rik, Glt25d2, Rgl1, EG639787, Apobec4, Arpc5, Ncf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069P10.bB6Ng01-069P10.g
ACCDH888110DH888111
length1,170943
definitionDH888110|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P10, 5' end.DH888111|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,679,081 - 153,680,266)(153,495,914 - 153,496,857)
sequence
gaattcttccttgttcgtctgtacaatatggaggggcggcaacgttaggt
actaccttggagagctaactgttatccttgtttgcctagctcatcctgga
ctctcaggatgacatttaaggcgagggatgaagcctgcctgtcctgagga
ctggcctgccttagggcctacctggttttacgttgaggttcgctactgca
gtctcctattacttcctcaacatctggcttctgaaagttcctcgttgttt
caagggatcttttcctgcagttttatgggtgttcaagatggtgaagctgg
tttcaactggtgggattctctccctgcctctctacttgagcctgttagaa
gtcaagggatttatcactctgccaaaggtcactggtgacacaggactgat
tgatacactgaggactttgggggtgaagttcctctgcagggaggcagtgc
ggagggcaggcggcgaaggctcatttgtgcccagggctttactttgctgg
gatctcacagtgaagcagtgagctagcagcttggaaacagccatcctttg
aaataggttctcttagcaccttcacgggtgaggaagctgagaggctcagt
ttaaggtgagttagttagaagctgggctaggatacttactcagaagtctg
gtgcctggagcagactcttgacttctagtttacacataaggaagagaaaa
tctcaaaggcctcaccccatcccaagtccccttggtgccaccactgggac
tctccaagaaacttgtacctctttctagaaccagagggctatgtttacta
gcaagcaaggcagcgtatgctcgttctcaaatcactgctctgaagattga
gtttaaaaacacacaacaaaatagtttttttttttaaagaattgtgcatt
taaaggttattctacacttaacatctatgacttgctttgttctacgtgtc
ctcatgtgccttggtcacatagggctagagagattgctcatctggtaaaa
tgtttgccatgcaatacaaagacctgaatttgaccttcagcaacatgcaa
agccagcatgatgggacccacgttttggatctcaggctcagagcagagca
ggaggattctgaactggctgtggagcagtcttgttaatcatttagcttca
ggttaggacagatccatgtc
gaattccaagagcaaccagtgttacagatcatgttaaaggacaattacca
gtagataagctgtacactgatgcccaagatggcattagtgactttcgtca
ctgggtttcaggagctgtggggcaggaatcagactgcagcgagaaaagca
atagactgtgaagtcagcaaatattgctcagctttgccattgaggaagag
actttggggagtcggagcctgcaggaggcacatgacagggagctctgtga
gggtctttggagattcttccaacagtagggagctgaggaagatgttttgg
ctgtctgtgtctctctggacgagtagactataccagtgggaaggaaatgc
tgggctggcagtaggattgagaggagatgaaccccatttccctgccatct
tgttatcctgtggctgtccccagatacttttgcagaagtgtttgaaacac
aagactcatgctttgaaactacccgtgttcctattatttctccagcttcc
agcgagaagaactctcagccctttgtgctcctccctaaggcattcccagt
gtacctgtggcagccttacctcaggcatggctacttctgtttccatgagg
ccgccgaacagcagaagttcagcgctcttctcaatgactgcatcagacac
ctgaaccacggtaggctcagctgctctctgccctaacggccaccttttct
gaactgctttggtcagtcatctgtggccgtaattcttaaagcctaagagg
acattgccataaggaaagaaagcggggctataaatagcaagcttttgggc
acaaggagctcagtggacagagcttaggacagttctgtggtagcagttga
aggcctgttctagagggccccctggttattcattatcctgggcgctccat
cattagataatccttcctacctctttctctggtgtttttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_153679081_153680266
seq2: B6Ng01-069P10.b_46_1215 (reverse)

seq1  GACATGGGATCTGTCACTAAACCTGGAAGCTGAATGATTAGGCAAGACTG  50
      ||||| ||||||||| || ||||| |||||| ||||||||  ||||||| 
seq2  GACAT-GGATCTGTC-CT-AACCT-GAAGCTAAATGATTA-ACAAGACT-  44

seq1  GCTCACCAGCCAGCTCCAGGAATCCTCCTGCCTCTGCCTCCTGAGCTCTG  100
      ||||  ||||||| ||   ||||||||||| ||||||   |||||| |||
seq2  GCTCCACAGCCAGTTC--AGAATCCTCCTG-CTCTGC--TCTGAGC-CTG  88

seq1  AGATCACAAACGTGGGTCCCATCATGCCTGGCTTTTGCATGGTTGCTGGA  150
      |||||  ||||||||||||||||||| ||||| ||||||| ||||||| |
seq2  AGATCCAAAACGTGGGTCCCATCATG-CTGGC-TTTGCAT-GTTGCTGAA  135

seq1  GGTCAAATTCAGGTCTTTGTATTTGCATGGCAAACATTTTACCAGATGAG  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTCAAATTCAGGTCTTTGTA-TTGCATGGCAAACATTTTACCAGATGAG  184

seq1  CAATCTCTCTAGCCCTATGTGACCAAGGCACATGAGGACACGTAGAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCTCTAGCCCTATGTGACCAAGGCACATGAGGACACGTAGAACAA  234

seq1  AGCAAGTCATAGATGTTAAGTGTAGAATAACCTTTAAATGCACAATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCATAGATGTTAAGTGTAGAATAACCTTTAAATGCACAATTCTT  284

seq1  TAAAAAAAAAAACTATTTTGTTGTGTGTTTTTAAACTCAATCTTCAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAACTATTTTGTTGTGTGTTTTTAAACTCAATCTTCAGAGC  334

seq1  AGTGATTTGAGAACGAGCATACGCTGCCTTGCTTGCTAGTAAACATAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGAGAACGAGCATACGCTGCCTTGCTTGCTAGTAAACATAGCC  384

seq1  CTCTGGTTCTAGAAAGAGGTACAAGTTTCTTGGAGAGTCCCAGTGGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTCTAGAAAGAGGTACAAGTTTCTTGGAGAGTCCCAGTGGTGGC  434

seq1  ACCAAGGGGACTTGGGATGGGGTGAGGCCTTTGAGATTTTCTCTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGGGACTTGGGATGGGGTGAGGCCTTTGAGATTTTCTCTTCCTTA  484

seq1  TGTGTAAACTAGAAGTCAAGAGTCTGCTCCAGGCACCAGACTTCTGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAACTAGAAGTCAAGAGTCTGCTCCAGGCACCAGACTTCTGAGTA  534

seq1  AGTATCCTAGCCCAGCTTCTAACTAACTCACCTTAAACTGAGCCTCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTAGCCCAGCTTCTAACTAACTCACCTTAAACTGAGCCTCTCAG  584

seq1  CTTCCTCACCCGTGAAGGTGCTAAGAGAACCTATTTCAAAGGATGGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCACCCGTGAAGGTGCTAAGAGAACCTATTTCAAAGGATGGCTGT  634

seq1  TTCCAAGCTGCTAGCTCACTGCTTCACTGTGAGATCCCAGCAAAGTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGCTGCTAGCTCACTGCTTCACTGTGAGATCCCAGCAAAGTAAAG  684

seq1  CCCTGGGCACAAATGAGCCTTCGCCGCCTGCCCTCCGCACTGCCTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCACAAATGAGCCTTCGCCGCCTGCCCTCCGCACTGCCTCCCTG  734

seq1  CAGAGGAACTTCACCCCCAAAGTCCTCAGTGTATCAATCAGTCCTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAACTTCACCCCCAAAGTCCTCAGTGTATCAATCAGTCCTGTGTC  784

seq1  ACCAGTGACCTTTGGCAGAGTGATAAATCCCTTGACTTCTAACAGGCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGACCTTTGGCAGAGTGATAAATCCCTTGACTTCTAACAGGCTCA  834

seq1  AGTAGAGAGGCAGGGAGAGAATCCCACCAGTTGAAACCAGCTTCACCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAGGCAGGGAGAGAATCCCACCAGTTGAAACCAGCTTCACCATC  884

seq1  TTGAACACCCATAAAACTGCAGGAAAAGATCCCTTGAAACAACGAGGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACACCCATAAAACTGCAGGAAAAGATCCCTTGAAACAACGAGGAAC  934

seq1  TTTCAGAAGCCAGATGTTGAGGAAGTAATAGGAGACTGCAGTAGCGAACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGCCAGATGTTGAGGAAGTAATAGGAGACTGCAGTAGCGAACC  984

seq1  TCAACGTAAAACCAGGTAGGCCCTAAGGCAGGCCAGTCCTCAGGACAGGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGTAAAACCAGGTAGGCCCTAAGGCAGGCCAGTCCTCAGGACAGGC  1034

seq1  AGGCTTCATCCCTCGCCTTAAATGTCATCCTGAGAGTCCAGGATGAGCTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCATCCCTCGCCTTAAATGTCATCCTGAGAGTCCAGGATGAGCTA  1084

seq1  GGCAAACAAGGATAACAGTTAGCTCTCCAAGGTAGTACCTAACGTTGCCG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACAAGGATAACAGTTAGCTCTCCAAGGTAGTACCTAACGTTGCCG  1134

seq1  CCCCTCCATATTGTACAGACGAACAAGGAAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCATATTGTACAGACGAACAAGGAAGAATTC  1170

seq1: chr1_153495914_153496857
seq2: B6Ng01-069P10.g_68_1010

seq1  GAATTCCAAGAGCAACCAGTGTTACAGATCATGTTAAAGGACAATTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAGCAACCAGTGTTACAGATCATGTTAAAGGACAATTACCA  50

seq1  GTAGATAAGCTGTACACTGATGCCCAAGATGGCATTAGTGACTTTCGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAAGCTGTACACTGATGCCCAAGATGGCATTAGTGACTTTCGTCA  100

seq1  CTGGGTTTCAGGAGCTGTGGGGCAGGAATCAGACTGCAGCGAGAAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTCAGGAGCTGTGGGGCAGGAATCAGACTGCAGCGAGAAAAGCA  150

seq1  ATAGACTGTGAAGTCAGCAAATATTGCTCAGCTTTGCCATTGAGGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGTGAAGTCAGCAAATATTGCTCAGCTTTGCCATTGAGGAAGAG  200

seq1  ACTTTGGGGAGTCGGAGCCTGCAGGAGGCACATGACAGGGAGCTCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGGAGTCGGAGCCTGCAGGAGGCACATGACAGGGAGCTCTGTGA  250

seq1  GGGTCTTTGGAGATTCTTCCAACAGTAGGGAGCTGAGGAAGATGTTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTGGAGATTCTTCCAACAGTAGGGAGCTGAGGAAGATGTTTTGG  300

seq1  CTGTCTGTGTCTCTCTGGACGAGTAGACTATACCAGTGGGAAGGAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTGTCTCTCTGGACGAGTAGACTATACCAGTGGGAAGGAAATGC  350

seq1  TGGGCTGGCAGTAGGATTGAGAGGAGATGAACCCCATTTCCCTGCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGGCAGTAGGATTGAGAGGAGATGAACCCCATTTCCCTGCCATCT  400

seq1  TGTTATCCTGTGGCTGTCCCCAGATACTTTTGCAGAAGTGTTTGAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCCTGTGGCTGTCCCCAGATACTTTTGCAGAAGTGTTTGAAACAC  450

seq1  AAGACTCATGCTTTGAAACTACCCGTGTTCCTATTATTTCTCCAGCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCATGCTTTGAAACTACCCGTGTTCCTATTATTTCTCCAGCTTCC  500

seq1  AGCGAGAAGAACTCTCAGCCCTTTGTGCTCCTCCCTAAGGCATTCCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGAAGAACTCTCAGCCCTTTGTGCTCCTCCCTAAGGCATTCCCAGT  550

seq1  GTACCTGTGGCAGCCTTACCTCAGGCATGGCTACTTCTGTTTCCATGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTGGCAGCCTTACCTCAGGCATGGCTACTTCTGTTTCCATGAGG  600

seq1  CCGCCGAACAGCAGAAGTTCAGCGCTCTTCTCAATGACTGCATCAGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGAACAGCAGAAGTTCAGCGCTCTTCTCAATGACTGCATCAGACAC  650

seq1  CTGAACCACGGTAGGCTCAGCTGCTCTCTGCCCTAACGGCCACCTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCACGGTAGGCTCAGCTGCTCTCTGCCCTAACGGCCACCTTTTCT  700

seq1  GAACTGCTTTGGTCAGTCATCTGTGGCCGTAATTCTTAAAGCCTAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTTTGGTCAGTCATCTGTGGCCGTAATTCTTAAAGCCTAAGAGG  750

seq1  ACATTGCCATAAGGAAAGAAAGCGGGGCTATAAATAGCAAGC-TTTGGGC  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACATTGCCATAAGGAAAGAAAGCGGGGCTATAAATAGCAAGCTTTTGGGC  800

seq1  ACAAGGAGCTCAGTGGACAGAGCTTAGGACAGTTCTGTGGTAGCAGTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGCTCAGTGGACAGAGCTTAGGACAGTTCTGTGGTAGCAGTTGA  850

seq1  AGGCCTGTTCTAGAGGGCCCCCTGGTTATTCATTATCCTGGCCGCTCCAT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGCCTGTTCTAGAGGGCCCCCTGGTTATTCATTATCCTGGGCGCTCCAT  900

seq1  CATTAGTATAATCCTTCCTACCTCTTTCTCCTGGTGTTTTTATTT  944
      |||||| |||||||||||||||||||||| |||||||||||||||
seq2  CATTAG-ATAATCCTTCCTACCTCTTTCT-CTGGTGTTTTTATTT  943