BAC Information

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BAC

Clone NameB6Ng01-070D23
Chromosome1 (Build37)
Map Location 121,380,637 - 121,575,518
singlet/doubletdoublet
Overlap geneRalb, Tmem185b, Epb4.1l5, Ptpn4
Upstream geneClasp1, Tcfcp2l1, LOC100041753, Gli2, LOC666838, LOC100041778, Inhbb
Downstream geneLOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3, C1ql2, Marco, En1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070D23.bB6Ng01-070D23.g
ACCDH888309DH888310
length1701,150
definitionDH888309|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D23, 5' end.DH888310|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,380,637 - 121,380,802)(121,574,361 - 121,575,518)
sequence
caagtcagcactgctagggatgggggcaaggagccggtcacattataaaa
gtcaacacagcccaagccagagatgcctcacaaagtgaattccaggccat
ccagagtctgtctcccaaagtgggggggggggggatgatagaggagtctg
gatggggacaccggacccga
gaattcaaatttatgtcttaaataggtaattttctgtattcaatctgttg
acaatcaggttaaatgtcaccagtattggccagaaccctcagaaagctca
tcctatggatgctatcaagtcacctgccactctgaagaaggaaaccctgc
ctatatcttcaggaagatgacactgtttaaccaagaggtaagaagtcaag
agtgtctgtgtataagaactgctgtaaagactttggaaaatgaaaatgtt
tttagtctgagactagttactaggaaacaaaagttactcaactggtgact
agaaggatggatcatcagttaagaacaacacttgctgggggctgaaggaa
tggctcagaggttaagtgcaccgactgctcttccaaagaccctgagttca
attcccaacaaccacatggtgactcaaaacattctttaatgggatccgat
accctcttctggtgtgtctggagatagctacagtgtgctcatatatacat
aaaataaataattcttaaaaacaaaacaaaagaacacttgctgattagtc
ataaggaaaattcagatcgcagcactgatataataagctggacataacta
caagtgcctgtgaccccagctctgagaatttagacagaaggatccctggg
gctttctgagttctatctagcatagctctgagcaatgaccaggtttagtg
agagatactgttctaaaggaataagaagaaagtaagaaaggaggatacct
gataacttttctggcctccacatatatatagtccacatacatgcacatac
acacacacactttatttatctttgcatagttctgaggtactctggttata
taaataaaaatgtcatggctagatatagctagctttatatagctatagtt
agactaagaaaaaggactatgttgaagatagaaatcactatgcacacata
cacacacacttgcctacctcttggtcatctagctaggaaaataaagataa
aataaagaactattcttaatgatacctaaaggattggtacattataatta
taagctagacagtatatctaatttattctttattcaataaactttagccg
gatctcctgtaaggttaagcttcatttaacttcgatcttttctatatgtt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_121380637_121380802
seq2: B6Ng01-070D23.b_52_217

seq1  CAAGTCAGCACTGCTAGGGATGGGGGCAAGGAGCCGGTCACATTATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGCACTGCTAGGGATGGGGGCAAGGAGCCGGTCACATTATAAAA  50

seq1  GTCAACACAGCCCAAGCCAGAGATGCCTCACAAAGTGAATTCCAGGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACAGCCCAAGCCAGAGATGCCTCACAAAGTGAATTCCAGGCCAT  100

seq1  CCAGAGTCTGTCTCCCAAAGTGGGGGGGGGGGGGATGATAGAGGAGTCGG  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCAGAGTCTGTCTCCCAAAGTGGGGGGGGGGGGGATGATAGAGGAGTCTG  150

seq1  GATGGGGACACGGGAC  166
      ||||||||||| ||||
seq2  GATGGGGACACCGGAC  166

seq1: chr1_121574361_121575518
seq2: B6Ng01-070D23.g_67_1216 (reverse)

seq1  AACATATAGAAAAGGAATCGGACAGTAAATGAAGCTAAACTTTACAGGGA  50
      ||||||||||||||  ||| ||   ||||||||||| ||| ||||| |||
seq2  AACATATAGAAAAG--ATC-GAAGTTAAATGAAGCTTAACCTTACA-GGA  46

seq1  GAAAACGGCTAAAGTTTATTTGAAT-AAGAATAAATTAAGGATATACTGT  99
      | |  ||||||||||||| |||||| ||||||||||||  ||||||||||
seq2  G-ATCCGGCTAAAGTTTA-TTGAATAAAGAATAAATTA--GATATACTGT  92

seq1  CTAGCTTATAATTATAATGTACCAAT-CTGTAGGTTAATCATTAAG-ATA  147
      |||||||||||||||||||||||||| || |||||  ||||||||| |||
seq2  CTAGCTTATAATTATAATGTACCAATCCTTTAGGT--ATCATTAAGAATA  140

seq1  GTTCTTTATTTTAATCTTTATTTTCCTAGCTAGATGACCAAGAGGTAGGC  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTATTTT-ATCTTTATTTTCCTAGCTAGATGACCAAGAGGTAGGC  189

seq1  AAGTGTGTGTGTATGTGTGCATAGTGATTTCTATCTTCAACATAGTCCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTGTGTATGTGTGCATAGTGATTTCTATCTTCAACATAGTCCTT  239

seq1  TTTCTTAGTCTAACTATAGCTATATAAAGCTAGCTATATCTAGCCATGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGTCTAACTATAGCTATATAAAGCTAGCTATATCTAGCCATGAC  289

seq1  ATTTTTATTTATATAACCAGAGTACCTCAGAACTATGCAAAGATAAATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTATATAACCAGAGTACCTCAGAACTATGCAAAGATAAATAA  339

seq1  AGTGTGTGTGTGTATGTGCATGTATGTGGACTATATATATGTGGAGGCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGTGTGTATGTGCATGTATGTGGACTATATATATGTGGAGGCCA  389

seq1  GAAAAGTTATCAGGTATCCTCCTTTCTTACTTTCTTCTTATTCCTTTAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTATCAGGTATCCTCCTTTCTTACTTTCTTCTTATTCCTTTAGA  439

seq1  ACAGTATCTCTCACTAAACCTGGTCATTGCTCAGAGCTATGCTAGATAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATCTCTCACTAAACCTGGTCATTGCTCAGAGCTATGCTAGATAGA  489

seq1  ACTCAGAAAGCCCCAGGGATCCTTCTGTCTAAATTCTCAGAGCTGGGGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAAGCCCCAGGGATCCTTCTGTCTAAATTCTCAGAGCTGGGGTC  539

seq1  ACAGGCACTTGTAGTTATGTCCAGCTTATTATATCAGTGCTGCGATCTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCACTTGTAGTTATGTCCAGCTTATTATATCAGTGCTGCGATCTGA  589

seq1  ATTTTCCTTATGACTAATCAGCAAGTGTTCTTTTGTTTTGTTTTTAAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTATGACTAATCAGCAAGTGTTCTTTTGTTTTGTTTTTAAGAA  639

seq1  TTATTTATTTTATGTATATATGAGCACACTGTAGCTATCTCCAGACACAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTATGTATATATGAGCACACTGTAGCTATCTCCAGACACAC  689

seq1  CAGAAGAGGGTATCGGATCCCATTAAAGAATGTTTTGAGTCACCATGTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGGTATCGGATCCCATTAAAGAATGTTTTGAGTCACCATGTGG  739

seq1  TTGTTGGGAATTGAACTCAGGGTCTTTGGAAGAGCAGTCGGTGCACTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGGAATTGAACTCAGGGTCTTTGGAAGAGCAGTCGGTGCACTTAA  789

seq1  CCTCTGAGCCATTCCTTCAGCCCCCAGCAAGTGTTGTTCTTAACTGATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGCCATTCCTTCAGCCCCCAGCAAGTGTTGTTCTTAACTGATGA  839

seq1  TCCATCCTTCTAGTCACCAGTTGAGTAACTTTTGTTTCCTAGTAACTAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTTCTAGTCACCAGTTGAGTAACTTTTGTTTCCTAGTAACTAGT  889

seq1  CTCAGACTAAAAACATTTTCATTTTCCAAAGTCTTTACAGCAGTTCTTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTAAAAACATTTTCATTTTCCAAAGTCTTTACAGCAGTTCTTAT  939

seq1  ACACAGACACTCTTGACTTCTTACCTCTTGGTTAAACAGTGTCATCTTCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACTCTTGACTTCTTACCTCTTGGTTAAACAGTGTCATCTTCC  989

seq1  TGAAGATATAGGCAGGGTTTCCTTCTTCAGAGTGGCAGGTGACTTGATAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATATAGGCAGGGTTTCCTTCTTCAGAGTGGCAGGTGACTTGATAG  1039

seq1  CATCCATAGGATGAGCTTTCTGAGGGTTCTGGCCAATACTGGTGACATTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATAGGATGAGCTTTCTGAGGGTTCTGGCCAATACTGGTGACATTT  1089

seq1  AACCTGATTGTCAACAGATTGAATACAGAAAATTACCTATTTAAGACATA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATTGTCAACAGATTGAATACAGAAAATTACCTATTTAAGACATA  1139

seq1  AATTTGAATTC  1158
      |||||||||||
seq2  AATTTGAATTC  1150