BAC Information

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BAC

Clone NameB6Ng01-070O19
Chromosome1 (Build37)
Map Location 149,218,898 - 149,328,280
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070O19.bB6Ng01-070O19.g
ACCDH888772DH888773
length1,112745
definitionDH888772|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O19, 5' end.DH888773|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,218,898 - 149,220,013)(149,327,536 - 149,328,280)
sequence
gaattcattgcaaatatggatgtatttgtaggcagcaatggaacctatat
gtctaaaataaattattttcagatcagttggaagacaaaattctgaaaca
gtatgattatggggatttacccaacaatattccttatagagcatcatcca
ggctgaaaataagaaaaaggatgggaaaatgaggtatactttatgagtga
cactagccaacagcaagtaaatacttcatgtaagatcaagtgaatatgta
tgacttatcatggaacatcctctgggatatactcgatactaggcaataaa
atattctaaaaggtaaaataatcaagaaactaaaactagtgtgctttctc
tgagtacagttatagaaaactacaagttaatggtaaatacccattaatga
tcaaaataaacattcaataaatgtaagtaaataaacttaagaatcttata
aaattattatagaagctaaaatccaaagcagatcaacagcatcactagga
gagaaggttacatcagtcaaagggtacagcaaatagaaaaattgacttat
tacaacttgatcaaccagaaaaacaagatgaagacctatccccacattat
aaaataaaaatctttgcaaaaccaaacaggcagcatacaccagctgatat
gaggcccccaacacacatacagtagaagactgctgagtctgtgttcattc
agagatgatgcacctaaccctcagaagattgaacgcactagggtgtttag
aggtcaggtggtgttgtgcatagccctgggattaattatatttgatgtta
actctgttctcctgtgaggggttgtgaacaaggactgagtcagcactcac
gtgatttcctgtaaacctgcttctcaccttaacctgttaaaataagggag
aactgatgattggtcagataaaagggacggtggagcagaagtgagggaga
gagagaaagagaaaatggaagaggaaaaaagcagagcagagctttggcct
ggagaaaccccaagttctaaggtcccatagatgtggaagatggtagtgta
gcagtagattgcccaatctaaggcgtacacgcatatattccatattactg
gggtttgtgttt
gaattcatagttggaactgaagagatggctcagtgtttaagaacgtgtac
tgctgaggctagtacccagcaaacacatcaggtgttgcacaactgccctg
aactctagctgcaggggatctggagcccccttctggcctcttaacaatcc
ctgaactcacattcacatatacaggacacactcataattaaaaataaaat
atgtctttaaaaaaatgaattcaaaggctatgccaaaagaactctgatcc
aactagaagaatgttctactgaccagagatgagaaaaatctgagcagcaa
ttaatgacaattgctaaaattgaaatgtatacaattttcagtatacaatt
tcataatggttctaaaaataaagtctgtggtcaccactggagaatggtag
aaattactaacttattgtgttggaaacaataaaaaacaacaaaaagagca
tttatagattatttcacaggatgccagtgagttaagaactttttatggag
tattactctagttaagtaaggttagaagaataaattagaatattttccaa
ttttgcaatgcaacaaacactcatgatggctgtcatttcttgctaaaggc
tgttgtcacctccagtttcttcccttttctcccaccaaacccttccatat
atacccatttcccctttgctcttccaaactcatggcttcttcatatatat
atatttatataaatatatatatatatgtgtgtgtgtgtgtatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149218898_149220013
seq2: B6Ng01-070O19.b_47_1158

seq1  GAATTCATTGCAAATATGGATGTATTTGTAGGCAGCAATGGAACCTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCAAATATGGATGTATTTGTAGGCAGCAATGGAACCTATAT  50

seq1  GTCTAAAATAAATTATTTTCAGATCAGTTGGAAGACAAAATTCTGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAAATAAATTATTTTCAGATCAGTTGGAAGACAAAATTCTGAAACA  100

seq1  GTATGATTATGGGGATTTACCCAACAATATTCCTTATAGAGCATCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATTATGGGGATTTACCCAACAATATTCCTTATAGAGCATCATCCA  150

seq1  GGCTGAAAATAAGAAAAAGGATGGGAAAATGAGGTATACTTTATGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAATAAGAAAAAGGATGGGAAAATGAGGTATACTTTATGAGTGA  200

seq1  CACTAGCCAACAGCAAGTAAATACTTCATGTAAGATCAAGTGAATATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCAACAGCAAGTAAATACTTCATGTAAGATCAAGTGAATATGTA  250

seq1  TGACTTATCATGGAACATCCTCTGGGATATACTCGATACTAGGCAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTATCATGGAACATCCTCTGGGATATACTCGATACTAGGCAATAAA  300

seq1  ATATTCTAAAAGGTAAAATAATCAAGAAACTAAAACTAGTGTGCTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTAAAAGGTAAAATAATCAAGAAACTAAAACTAGTGTGCTTTCTC  350

seq1  TGAGTACAGTTATAGAAAACTACAAGTTAATGGTAAATACCCATTAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACAGTTATAGAAAACTACAAGTTAATGGTAAATACCCATTAATGA  400

seq1  TCAAAATAAACATTCAATAAATGTAAGTAAATAAACTTAAGAATCTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAACATTCAATAAATGTAAGTAAATAAACTTAAGAATCTTATA  450

seq1  AAATTATTATAGAAGCTAAAATCCAAAGCAGATCAACAGCATCACTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTATAGAAGCTAAAATCCAAAGCAGATCAACAGCATCACTAGGA  500

seq1  GAGAAGGTTACATCAGTCAAAGGGTACAGCAAATAGAAAAATTGACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTTACATCAGTCAAAGGGTACAGCAAATAGAAAAATTGACTTAT  550

seq1  TACAACTTGATCAACCAGAAAAACAAGATGAAGACCTATCCCCACATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTTGATCAACCAGAAAAACAAGATGAAGACCTATCCCCACATTAT  600

seq1  AAAATAAAAATCTTTGCAAAACCAAACAGGCAGCATACACCAGCTGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATCTTTGCAAAACCAAACAGGCAGCATACACCAGCTGATAT  650

seq1  GAGGCCCCCAACACACATACAGTAGAAGACTGCTGAGTCTGTGTTCATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCCCAACACACATACAGTAGAAGACTGCTGAGTCTGTGTTCATTC  700

seq1  AGAGATGATGCACCTAACCCTCAGAAGATTGAACGCACTAGGGTGTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGATGCACCTAACCCTCAGAAGATTGAACGCACTAGGGTGTTTAG  750

seq1  AGGTCAGGTGGTGTTGTGCATAGCCCTGGGATTAATTATATTTGATGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGGTGGTGTTGTGCATAGCCCTGGGATTAATTATATTTGATGTTA  800

seq1  ACTCTGTTCTCCTGTGAGGGGTTGTGAACAAGGACTGAGTCAGCACTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTCTGTTCTCCTGTGAGGGGTTGTGAACAAGGACTGAGTCAGCACTCAC  850

seq1  GTGATTTCCTGTAAACCTGCTTCTCACCTTAACCTGTTAAAATAAGGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCCTGTAAACCTGCTTCTCACCTTAACCTGTTAAAATAAGGGAG  900

seq1  AACTGATGATTGGTCAGATAAAAGGGACGGTGGAGCAGAAGGTGAGGGAG  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACTGATGATTGGTCAGATAAAAGGGACGGTGGAGCAGAA-GTGAGGGAG  949

seq1  AGAGAGGAAGGAGAAAATGGAAGAGGGAAAAAAAGCAGAGCAGAAGCATA  1000
      ||||| ||| ||||||||||||||||  ||||||||||||||| ||| | 
seq2  AGAGA-GAAAGAGAAAATGGAAGAGG--AAAAAAGCAGAGCAG-AGC-TT  994

seq1  TGGCCTGGAGAAACCCCAAGTTCTAAGGGTCTCATAGATGTGGAAGATGG  1050
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  TGGCCTGGAGAAACCCCAAGTTCTAA-GGTCCCATAGATGTGGAAGATGG  1043

seq1  TAGTGTAGCAGTAGATCTGCCCAATCT-AGGCGTACA-GCATATATT-CA  1097
      |||||||||||||||| |||||||||| ||||||||| ||||||||| ||
seq2  TAGTGTAGCAGTAGAT-TGCCCAATCTAAGGCGTACACGCATATATTCCA  1092

seq1  TATTAACTGTG--TTGTGTTT  1116
      |||| |||| |  ||||||||
seq2  TATT-ACTGGGGTTTGTGTTT  1112

seq1: chr1_149327536_149328280
seq2: B6Ng01-070O19.g_67_811 (reverse)

seq1  TACATACACACACACACACATATATATATATATTTATATAAATATATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACACACACACACACATATATATATATATTTATATAAATATATATA  50

seq1  TATGAAGAAGCCATGAGTTTGGAAGAGCAAAGGGGAAATGGGTATATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAGCCATGAGTTTGGAAGAGCAAAGGGGAAATGGGTATATATG  100

seq1  GAAGGGTTTGGTGGGAGAAAAGGGAAGAAACTGGAGGTGACAACAGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTTTGGTGGGAGAAAAGGGAAGAAACTGGAGGTGACAACAGCCTT  150

seq1  TAGCAAGAAATGACAGCCATCATGAGTGTTTGTTGCATTGCAAAATTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGAAATGACAGCCATCATGAGTGTTTGTTGCATTGCAAAATTGGA  200

seq1  AAATATTCTAATTTATTCTTCTAACCTTACTTAACTAGAGTAATACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCTAATTTATTCTTCTAACCTTACTTAACTAGAGTAATACTCCA  250

seq1  TAAAAAGTTCTTAACTCACTGGCATCCTGTGAAATAATCTATAAATGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTTCTTAACTCACTGGCATCCTGTGAAATAATCTATAAATGCTC  300

seq1  TTTTTGTTGTTTTTTATTGTTTCCAACACAATAAGTTAGTAATTTCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTGTTTTTTATTGTTTCCAACACAATAAGTTAGTAATTTCTACC  350

seq1  ATTCTCCAGTGGTGACCACAGACTTTATTTTTAGAACCATTATGAAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCAGTGGTGACCACAGACTTTATTTTTAGAACCATTATGAAATTG  400

seq1  TATACTGAAAATTGTATACATTTCAATTTTAGCAATTGTCATTAATTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGAAAATTGTATACATTTCAATTTTAGCAATTGTCATTAATTGCT  450

seq1  GCTCAGATTTTTCTCATCTCTGGTCAGTAGAACATTCTTCTAGTTGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGATTTTTCTCATCTCTGGTCAGTAGAACATTCTTCTAGTTGGATC  500

seq1  AGAGTTCTTTTGGCATAGCCTTTGAATTCATTTTTTTAAAGACATATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTTTTGGCATAGCCTTTGAATTCATTTTTTTAAAGACATATTTT  550

seq1  ATTTTTAATTATGAGTGTGTCCTGTATATGTGAATGTGAGTTCAGGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATTATGAGTGTGTCCTGTATATGTGAATGTGAGTTCAGGGATT  600

seq1  GTTAAGAGGCCAGAAGGGGGCTCCAGATCCCCTGCAGCTAGAGTTCAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGGCCAGAAGGGGGCTCCAGATCCCCTGCAGCTAGAGTTCAGGG  650

seq1  CAGTTGTGCAACACCTGATGTGTTTGCTGGGTACTAGCCTCAGCAGTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTGCAACACCTGATGTGTTTGCTGGGTACTAGCCTCAGCAGTACA  700

seq1  CGTTCTTAAACACTGAGCCATCTCTTCAGTTCCAACTATGAATTC  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTAAACACTGAGCCATCTCTTCAGTTCCAACTATGAATTC  745