BAC Information

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BAC

Clone NameB6Ng01-071M07
Chromosome1 (Build37)
Map Location 148,492,278 - 148,493,377
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071M07.bB6Ng01-071M07.g
ACCDH889372DH889373
length1,0881,171
definitionDH889372|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M07, 5' end.DH889373|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttgatgaacaaagataagctaattgatcagagaaataactg
tatattttataatctgaatttgtatattttcattttactttaggtgtatg
aatgttttgtttaaatgtattgaatatatcacatggaagcagtgctcata
gaggtcagaagagggcattagattgcctggaactgtagttacaggtataa
tcaggtttctatatggcaaaggcatgaagctggagcaatgtgaggctcag
aagacagatgagcctgagttagaatgttgtgttcctggttccctgtgtgc
tcctatatattttttattccactaaatcttatttttcttattttgtatgc
atatagcttatgtgtataggtcaggtacccacattaaaaaaacattcata
aagataaaccaggaaaatgaatagaaatagcgtacagaaatacctgtaat
atgtagaccattaagtattattagtgtggatcatattataggaaagggaa
aatagtacaaaataacttggtagatattcatattatacattataggtgtt
tttgatatataatatatctatatatacacacatatatatacatatacaca
cctatatatacatgcattctctacataacagcaaatgtgaaattatctta
attcaaattgattcatcttaatcactttatcagtttgacattcttcctgc
tcctcatttttttcaaaaacaatttcttattagatattttcttcatttac
atttcaaatgctatccagaaagtcccctataccttcccccgtgtcctgct
tcccaacccacccactcctgcttcctggccctggcattcccctgtattgg
ggcatataatcttcacaagaccaaggacctctccttccattgatggccga
ctaggccattttctgctacatatgcagctagagacatgagctctgggcat
actggtagttcatactgtgtcctcctatagggtgcaaaccccttcaactc
cttgggtacttctctagctcctccaatagatgactgtacatcacttctgt
atttgcaggactggcatatcctccaagagactatgtca
gaattctcacctgaggaataccgaaagactgagaaacacctgaaaaaatt
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactttggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaattcactaaattcctaggca
aatggtttgacctggagggcatcatcctgagtgaggtaacccaatcacaa
aagaactcaaatgaaatgtactcactgataagtggatattaacccagaaa
cttagtatagcgagatataaggtacaatatgtaaaacatatgaaactgaa
gaagaacgaagactacagtgtggacactttgctcattcttagaattggaa
acaatcacccatggaaggagttacagagacaaagtttggacctgagacaa
aaggatggtccatctagagactgacatatccagggatccatcccataatt
agcctccaagcgatgacaccattgcatacactagcaagccttagttgcaa
ggacggtgatatagctgtcccttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcaactattggatggatcacaggccccaat
ggaggagctagagaaagtatccaaggagctaacagatctgcaacctatca
gaggacacattattgactacagtactccagagctcttgactctagctgca
tatgtatcaaagatgactagtcggcatccactggaaagagaggccatgtc
agcaaactttatttgccagtaagaaaattacaaggtcaaaaatgggaatg
gggtgtgttgtgggagatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148492278_148493377
seq2: B6Ng01-071M07.b_46_1133

seq1  GAATTCCATTTGATGAACAAAGATAAGCTAATTGATCAGAGAAATAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGATGAACAAAGATAAGCTAATTGATCAGAGAAATAACTG  50

seq1  TATATTTTATAATCTGAATTTGTATATTTTCATTTTACTTTAGGTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATAATCTGAATTTGTATATTTTCATTTTACTTTAGGTGTATG  100

seq1  AATGTTTTGTTTAAATGTATTGAATATATCACATGGAAGCAGTGCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGTTTAAATGTATTGAATATATCACATGGAAGCAGTGCTCATA  150

seq1  GAGGTCAGAAGAGGGCATTAGATTGCCTGGAACTGTAGTTACAGGTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGAAGAGGGCATTAGATTGCCTGGAACTGTAGTTACAGGTATAA  200

seq1  TCAGGTTTCTATATGGCAAAGGCATGAAGCTGGAGCAATGTGAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTCTATATGGCAAAGGCATGAAGCTGGAGCAATGTGAGGCTCAG  250

seq1  AAGACAGATGAGCCTGAGTTAGAATGTTGTGTTCCTGGTTCCCTGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATGAGCCTGAGTTAGAATGTTGTGTTCCTGGTTCCCTGTGTGC  300

seq1  TCCTATATATTTTTTATTCCACTAAATCTTATTTTTCTTATTTTGTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATATTTTTTATTCCACTAAATCTTATTTTTCTTATTTTGTATGC  350

seq1  ATATAGCTTATGTGTATAGGTCAGGTACCCACATTAAAAAAACATTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCTTATGTGTATAGGTCAGGTACCCACATTAAAAAAACATTCATA  400

seq1  AAGATAAACCAGGAAAATGAATAGAAATAGCGTACAGAAATACCTGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAACCAGGAAAATGAATAGAAATAGCGTACAGAAATACCTGTAAT  450

seq1  ATGTAGACCATTAAGTATTATTAGTGTGGATCATATTATAGGAAAGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACCATTAAGTATTATTAGTGTGGATCATATTATAGGAAAGGGAA  500

seq1  AATAGTACAAAATAACTTGGTAGATATTCATATTATACATTATAGGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACAAAATAACTTGGTAGATATTCATATTATACATTATAGGTGTT  550

seq1  TTTGATATATAATATATCTATATATACACACATATATATACATATACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATATAATATATCTATATATACACACATATATATACATATACACA  600

seq1  CCTATATATACATGCATTCTCTACATAACAGCAAATGTGAAATTATCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATATACATGCATTCTCTACATAACAGCAAATGTGAAATTATCTTA  650

seq1  ATTCAAATTGATTCATCTTAATCACTTTATCAGTTTGACATTCTTCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTGATTCATCTTAATCACTTTATCAGTTTGACATTCTTCCTGC  700

seq1  TCCTCATTTTTTTCAAAAACAATTTCTTATTAGATATTTTCTTCATTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTTTTTCAAAAACAATTTCTTATTAGATATTTTCTTCATTTAC  750

seq1  ATTTCAAATGCTATCCAGAAAGTCCCCTATACCTTCCCCCGTGTCCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTATCCAGAAAGTCCCCTATACCTTCCCCCGTGTCCTGCT  800

seq1  TCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTATTGG  850

seq1  GGCATATAATCTTCACAAGACCAAGGACCTCTCCTTCCATTGATGGCCGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAATCTTCACAAGACCAAGGACCTCTCCTTCCATTGATGGCCGA  900

seq1  CTAGGCCATTTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATTTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGCAT  950

seq1  ACTGGTTAGTTCATACTGTTGTTCCTCCTATAGGGTTGCAAACCCCTTCA  1000
      ||||| |||||||||||||   ||||||||||||| ||||||||||||||
seq2  ACTGG-TAGTTCATACTGT--GTCCTCCTATAGGG-TGCAAACCCCTTCA  996

seq1  ACTCCTTGGGTACTTTCTCTAGCTCCTCCAATAGATGACTGTTATCATCC  1050
      ||||||||||||| ||||||||||||||||||||||||||||   ||| |
seq2  ACTCCTTGGGTAC-TTCTCTAGCTCCTCCAATAGATGACTGT--ACAT-C  1042

seq1  ACTTCTGTATTTGCCAGGCACTGGCATATCCTCACAAGAGACATATGTCA  1100
      ||||||||||||| |||| |||||||||||||| |||||||| |||||||
seq2  ACTTCTGTATTTG-CAGG-ACTGGCATATCCTC-CAAGAGAC-TATGTCA  1088