BAC Information

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BAC

Clone NameB6Ng01-071M16
Chromosome1 (Build37)
Map Location 62,955,088 - 63,137,012
singlet/doubletdoublet
Overlap geneA430093A21Rik
Upstream genePard3b, LOC667592, Nrp2, LOC100043070
Downstream geneNdufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071M16.bB6Ng01-071M16.g
ACCDH889388DH889389
length1,0891,156
definitionDH889388|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M16, 5' end.DH889389|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,955,088 - 62,956,193)(63,135,852 - 63,137,012)
sequence
gaattcctggggctactcatctgacacttgtggtggcttgtatcaattct
gtccagaagccactgctggcaattagccctgcccatctgctctccacata
ctcaagccactcccacaaatctggaccagttccccttcatgtggggcgga
acatctagacaggtccgtatctatcttggtgagcctcttgctaagcaggc
ttccccagacagtgccatccctgtctcctgtaacagctcgtgaagcctgg
ttgcatggcaggaagagactgggtgggcgtgtgtgcctcacacgcagctc
cctccctgaacaaagccacatgttgccattctctagggctgctcgacttc
actcaactaatttggaacagtgctcttgacaccagagtgagtttttatcc
tgctctgtggcccaggcgctccgcctacgggagcatcagcaaaatctgat
ccacccatttggttgttatctgcagcctagcctggacttggtgggtttgt
ctgcatcctagagatggtaccattctcacaggagaggcattctagtgcct
gagaagaaccatccagacagatccctatgtaccatcctgactcctgctga
gaggaagggaagttgaaataaccattgcctaatggtggtctgatcattcc
aaaatttttactaaaaatacatactcctgaggatctggtgattccgatcc
aggaaaatggagtaagtccctggaatttacatttatactaagtgccctcc
cccgggtgagccaggaaccttatttggagaaactacctggggaggccggc
tgtgccataaaggcaaggctcagggcccgtgtctggtgagtcagcttttc
tcagttgcctgctgacactaagtgtccaggaaacaccctgtctcaataaa
taaaacccagtggtaacagagagattctccagtttgctgagggcactgtt
ggatgcatcttctgggaaaaatctatactagtgaatggagcgacagagtt
cagactttagcacgcatccattaggagaatatacactatatcatgatagg
gaaagtgcactgtttcattagaagcactcagataagaga
gaattcctgtgagcacacgtggcttcaattacagtgcctggaagtcagaa
acatgccttgcggagcctcaggtgtgcaagggacctatgcattgagccct
cagcgtgtggctctcgggactgagggccagtccccttcccctgcctatga
tggatgctttgcttgctcacttagctgcagtgccttcacttcaggctttc
tttcccacgaggcaccgcctgtaccgccctttctcctgggccacagcagc
tgcggtcccagacgtccggagttttcttagaagaacaagctaagaagggg
aaggggttttggatttctatactgagagaagtacattctatttcaaaact
accccatgattgtgtaactgcaaaagacttttgttgttgttgtcgaaata
tttaatcccaacctactttcctatcaacctaaccccacccatgtctgctc
tgcccagctgttggcatctctactgaccaatcagataacttgggggcagg
ctcactcatcattttacatgcggactctcttctatgtggcaaccactaaa
atacaagtagcattaggccaatccactatagttggtagtgttatttgtaa
ataagttaaattggaattagaaagaggttaatattcctgttgtttcaaga
acccaggttgaattcatgaaatactatgtttaaatttctatataaatgtt
actagttaaatcataattacttagaagaattaatcatttgaaaataagaa
tttatttttgttaatacaattactcttgaacatgaagaatttgaggtgat
cttcctttcctacagaacaacaagctttagctgacagagttagctaggtg
tgttaacaactcattccagcagtcccagtactcagaaggagaaacagcaa
ggctaatctgtacacacagccttcccttactctagccactggtgagtggg
cactgtcacagcctgcagactgcatcctctgatcctctttctagaggctg
ctgagatggctctgctgaaaagaaaggcactggagacctggaatcaggcc
ctggaaatcccacgggagagggaaaacaagctccttccccagtctcttcc
tgacctgctgtggacacgcaagcccacgcaatgtgtgggatgccaaccta
attaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62955088_62956193
seq2: B6Ng01-071M16.b_46_1134

seq1  GAATTCCTGGGGCTACTCATCTGACACTTGTGGTGGCTTGTATCAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGGCTACTCATCTGACACTTGTGGTGGCTTGTATCAATTCT  50

seq1  GTCCAGAAGCCACTGCTGGCAATTAGCCCTGCCCATCTGCTCTCCACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAAGCCACTGCTGGCAATTAGCCCTGCCCATCTGCTCTCCACATA  100

seq1  CTCAAGCCACTCCCACAAATCTGGACCAGTTCCCCTTCATGTGGGGCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCCACTCCCACAAATCTGGACCAGTTCCCCTTCATGTGGGGCGGA  150

seq1  ACATCTAGACAGGTCCGTATCTATCTTGGTGAGCCTCTTGCTAAGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGACAGGTCCGTATCTATCTTGGTGAGCCTCTTGCTAAGCAGGC  200

seq1  TTCCCCAGACAGTGCCATCCCTGTCTCCTGTAACAGCTCGTGAAGCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGACAGTGCCATCCCTGTCTCCTGTAACAGCTCGTGAAGCCTGG  250

seq1  TTGCATGGCAGGAAGAGACTGGGTGGGCGTGTGTGCCTCACACGCAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGCAGGAAGAGACTGGGTGGGCGTGTGTGCCTCACACGCAGCTC  300

seq1  CCTCCCTGAACAAAGCCACATGTTGCCATTCTCTAGGGCTGCTCGACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGAACAAAGCCACATGTTGCCATTCTCTAGGGCTGCTCGACTTC  350

seq1  ACTCAACTAATTTGGAACAGTGCTCTTGACACCAGAGTGAGTTTTTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACTAATTTGGAACAGTGCTCTTGACACCAGAGTGAGTTTTTATCC  400

seq1  TGCTCTGTGGCCCAGGCGCTCCGCCTACGGGAGCATCAGCAAAATCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTGGCCCAGGCGCTCCGCCTACGGGAGCATCAGCAAAATCTGAT  450

seq1  CCACCCATTTGGTTGTTATCTGCAGCCTAGCCTGGACTTGGTGGGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATTTGGTTGTTATCTGCAGCCTAGCCTGGACTTGGTGGGTTTGT  500

seq1  CTGCATCCTAGAGATGGTACCATTCTCACAGGAGAGGCATTCTAGTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCTAGAGATGGTACCATTCTCACAGGAGAGGCATTCTAGTGCCT  550

seq1  GAGAAGAACCATCCAGACAGATCCCTATGTACCATCCTGACTCCTGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAACCATCCAGACAGATCCCTATGTACCATCCTGACTCCTGCTGA  600

seq1  GAGGAAGGGAAGTTGAAATAACCATTGCCTAATGGTGGTCTGATCATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGGAAGTTGAAATAACCATTGCCTAATGGTGGTCTGATCATTCC  650

seq1  AAAATTTTTACTAAAAATACATACTCCTGAGGATCTGGTGATTCCGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTACTAAAAATACATACTCCTGAGGATCTGGTGATTCCGATCC  700

seq1  AGGAAAATGGAGTAAGTCCCTGGAATTTACATTTATACTAAGTGCCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATGGAGTAAGTCCCTGGAATTTACATTTATACTAAGTGCCCTCC  750

seq1  CCCGGGTGAGCCAGGAACCTTATTTGGAGAAACTACCTGGGGAGGCCGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGTGAGCCAGGAACCTTATTTGGAGAAACTACCTGGGGAGGCCGGC  800

seq1  TGTGCCAT-AAGGCAAGGCTCAGGGCCCGTGTCTGGTGAGTCAGCTTTTC  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCATAAAGGCAAGGCTCAGGGCCCGTGTCTGGTGAGTCAGCTTTTC  850

seq1  TCAGGTTGCCTGCTGACACTAAGTGTCCAGGAAACACCCTGTCTCAATAA  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-GTTGCCTGCTGACACTAAGTGTCCAGGAAACACCCTGTCTCAATAA  899

seq1  ATAAAACCCAGTGGTAACAAGAGAGATTCTCCAGTTTGCTGAGGGCACTG  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAAAACCCAGTGGTAAC-AGAGAGATTCTCCAGTTTGCTGAGGGCACTG  948

seq1  TTGGATGCATCTTTCTGGGAAAAAATCTAATAACTAGTGAAATGGAGCGA  999
      ||||||||||| ||||||| |||||||||   ||||||| ||||||||||
seq2  TTGGATGCATC-TTCTGGG-AAAAATCTA--TACTAGTG-AATGGAGCGA  993

seq1  CAGAGTTCAGACCTTTAGCACGGCAATTCCAATTAGGGAGAATATACACT  1049
      ||||||||||| ||||||||| |||  ||| |||| ||||||||||||||
seq2  CAGAGTTCAGA-CTTTAGCAC-GCA--TCC-ATTA-GGAGAATATACACT  1037

seq1  ATAATCATGATAGGGAAAAGTGCACTGTTTCATTAGAAAGGCACTTCAGA  1099
      || |||||||||||| ||||||||||||||||||||||  |||| |||||
seq2  AT-ATCATGATAGGG-AAAGTGCACTGTTTCATTAGAA--GCAC-TCAGA  1082

seq1  TAAGAGA  1106
      |||||||
seq2  TAAGAGA  1089

seq1: chr1_63135852_63137012
seq2: B6Ng01-071M16.g_67_1222 (reverse)

seq1  TTTAATTTGTGTGTGCAT-CCACACA-TGCGTGGGCCTGCCGTGTCCACA  48
      ||||||| | ||  |||| ||||||| ||||||||| || ||||||||||
seq2  TTTAATTAG-GTTGGCATCCCACACATTGCGTGGGCTTG-CGTGTCCACA  48

seq1  GGCAGAGTCA-GAAGAGACTGGGGA--GAGCTGGTTTTTCCTTCTCCCGT  95
       |||| |||| ||||||||||||||  ||||| | |||||| ||||||||
seq2  -GCAG-GTCAGGAAGAGACTGGGGAAGGAGCTTG-TTTTCCCTCTCCCGT  95

seq1  GTGATTTCCCAGGGCCTGATTCCAGGTCCTCAGTGCCTTTCTTTTCAGCA  145
      | ||||| ||||||||||||||||||||  ||||||||||||||||||||
seq2  GGGATTT-CCAGGGCCTGATTCCAGGTCTCCAGTGCCTTTCTTTTCAGCA  144

seq1  GAGCCATCTCAGCAGCCTCTAGAAAGAGGGATCAAGAGGATGCAGTCTGC  195
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  GAGCCATCTCAGCAGCCTCTAGAAAGA-GGATC-AGAGGATGCAGTCTGC  192

seq1  AGGCTGTGACAGTGCCCACTCACCCAGTGGCTAGAGTAAGGGAAGGCTGT  245
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGCTGTGACAGTGCCCACTCA-CCAGTGGCTAGAGTAAGGGAAGGCTGT  241

seq1  GTGTACAGATTAGCCTTGCTGTTTCTCCTTCCTGAGTACTGGGACTGCTG  295
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGTACAGATTAGCCTTGCTGTTTCTCCTT-CTGAGTACTGGGACTGCTG  290

seq1  GAATGAGTTGTTAACACACCTAGCTAACTCTGTCAGCTAAAGCTTGTTGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTTGTTAACACACCTAGCTAACTCTGTCAGCTAAAGCTTGTTGT  340

seq1  TCTGTAGGAAAGGAAGATCACCTCAAATTCTTCATGTTCAAGAGTAATTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGAAAGGAAGATCACCTCAAATTCTTCATGTTCAAGAGTAATTG  390

seq1  TATTAACAAAAATAAATTCTTATTTTCAAATGATTAATTCTTCTAAGTAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAAAAATAAATTCTTATTTTCAAATGATTAATTCTTCTAAGTAA  440

seq1  TTATGATTTAACTAGTAACATTTATATAGAAATTTAAACATAGTATTTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTTAACTAGTAACATTTATATAGAAATTTAAACATAGTATTTCA  490

seq1  TGAATTCAACCTGGGTTCTTGAAACAACAGGAATATTAACCTCTTTCTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAACCTGGGTTCTTGAAACAACAGGAATATTAACCTCTTTCTAA  540

seq1  TTCCAATTTAACTTATTTACAAATAACACTACCAACTATAGTGGATTGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTTAACTTATTTACAAATAACACTACCAACTATAGTGGATTGGC  590

seq1  CTAATGCTACTTGTATTTTAGTGGTTGCCACATAGAAGAGAGTCCGCATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTACTTGTATTTTAGTGGTTGCCACATAGAAGAGAGTCCGCATG  640

seq1  TAAAATGATGAGTGAGCCTGCCCCCAAGTTATCTGATTGGTCAGTAGAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATGAGTGAGCCTGCCCCCAAGTTATCTGATTGGTCAGTAGAGA  690

seq1  TGCCAACAGCTGGGCAGAGCAGACATGGGTGGGGTTAGGTTGATAGGAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACAGCTGGGCAGAGCAGACATGGGTGGGGTTAGGTTGATAGGAAA  740

seq1  GTAGGTTGGGATTAAATATTTCGACAACAACAACAAAAGTCTTTTGCAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTGGGATTAAATATTTCGACAACAACAACAAAAGTCTTTTGCAGT  790

seq1  TACACAATCATGGGGTAGTTTTGAAATAGAATGTACTTCTCTCAGTATAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATCATGGGGTAGTTTTGAAATAGAATGTACTTCTCTCAGTATAG  840

seq1  AAATCCAAAACCCCTTCCCCTTCTTAGCTTGTTCTTCTAAGAAAACTCCG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAAACCCCTTCCCCTTCTTAGCTTGTTCTTCTAAGAAAACTCCG  890

seq1  GACGTCTGGGACCGCAGCTGCTGTGGCCCAGGAGAAAGGGCGGTACAGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCTGGGACCGCAGCTGCTGTGGCCCAGGAGAAAGGGCGGTACAGGC  940

seq1  GGTGCCTCGTGGGAAAGAAAGCCTGAAGTGAAGGCACTGCAGCTAAGTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTCGTGGGAAAGAAAGCCTGAAGTGAAGGCACTGCAGCTAAGTGA  990

seq1  GCAAGCAAAGCATCCATCATAGGCAGGGGAAGGGGACTGGCCCTCAGTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAAGCATCCATCATAGGCAGGGGAAGGGGACTGGCCCTCAGTCC  1040

seq1  CGAGAGCCACACGCTGAGGGCTCAATGCATAGGTCCCTTGCACACCTGAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGCCACACGCTGAGGGCTCAATGCATAGGTCCCTTGCACACCTGAG  1090

seq1  GCTCCGCAAGGCATGTTTCTGACTTCCAGGCACTGTAATTGAAGCCACGT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGCAAGGCATGTTTCTGACTTCCAGGCACTGTAATTGAAGCCACGT  1140

seq1  GTGCTCACAGGAATTC  1161
      ||||||||||||||||
seq2  GTGCTCACAGGAATTC  1156