BAC Information

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BAC

Clone NameB6Ng01-072M13
Chromosome1 (Build37)
Map Location 61,720,652 - 61,721,252
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072M13.b
ACCDH890098
length721
definitionDH890098|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M13, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattctgttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaaaattgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtacaaggatctgatggtgttttggat
ttcttcaagatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720652_61721252
seq2: B6Ng01-072M13.b_40_641 (reverse)

seq1  CTGGAAAACCTGGACGAAATGGACAA-ATTTCTGGACAGATACCAGGTAC  49
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  CTGGAAAACCTGGACGAAATGGACAATTTTTCTGGACAGATACCAGGTAC  50

seq1  CAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCT  100

seq1  AAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGG  150

seq1  ACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAA  200

seq1  TTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTA  250

seq1  CCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAA  300

seq1  AGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCG  350

seq1  ATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACACATT  399
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGCAAAAATCCTCAATAAAATTCTCGCTAACAGAATCCAAGAACACATT  400

seq1  AAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG  450

seq1  ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAAC  500

seq1  TCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTT  550

seq1  GACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAAT  600

seq1  TC  601
      ||
seq2  TC  602