BAC Information

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BAC

Clone NameB6Ng01-073O20
Chromosome1 (Build37)
Map Location 151,677,163 - 151,863,481
singlet/doubletdoublet
Overlap genePla2g4a
Upstream geneLOC100042792, LOC435647, LOC100042813
Downstream genePtgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073O20.bB6Ng01-073O20.g
ACCDH890914DH890915
length297809
definitionDH890914|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O20, 5' end.DH890915|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,677,163 - 151,677,459)(151,862,678 - 151,863,481)
sequence
aaatggcttgatcatcccagcacagaaattacacagtgggtttacttaga
aactccttattgaagaattttcttgcttcaacattactgagggaaacaga
gcaacgagatgggttctgtcttctgtattcaatgctctcaacaatggcat
cctttatcacctgccaaaagacacagaaaattaatgatgagcacagctat
aaatctctgaaacattcgttggttgaaaacaaaagcctcgtttctttctg
tcttttattttctttgcaagtgtgtgtgtgtgtgtgtggtgtatgtg
gaattcattgagggacgaaaatcaaacaaaagaaaggggagtaaaaacaa
gtgctcaggatgtgggaggggaacaggaaagcacagaaggaagaagggta
agaagaagcaatagagaggtaagtataatcaaagcatttgcatgtggaaa
tgccacagtgacttttaaaaagacttttaatggaattactcacaatgagc
agcttaccggacttaaatttcaaatatacgaaagaatgacaacccttgga
aaaatctagagatactatcattccagtgtgatgcaggaaatatttacagt
tctgagacaggaataatacatatcctggaccgaagacaggaaaatgtgac
tgtagaactacgtggccttagaaatagaaaaggccattcacaatgaactt
ttccatgtcttaacagtagtggaagagagccagaaggtggctcagtgggt
acaagtacttgttgccaagccctaagacttgagtattgtcctctgctctc
cattcagagtaaagaaagtaagggaaagaggtagtgggtgcataattcat
caggctgaatgctgtgttcacaattcagatttgataaacttagtaatgcc
agttttccccttcacatatttactcagctcttctacttggattgcaacct
tttaagggacatttccacatatatatacaaagcagaagtttcaaaaattt
gctgtcttgtaactatgcgtttttaccatgaataggagataaatgtgtgc
agagtgcacgtgttaagtatgtgtgtgagtgcatgtgtgtgtgtgtgtgt
gtgtgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151677163_151677459
seq2: B6Ng01-073O20.b_53_349

seq1  AAATGGCTTGATCATCCCAGCACAGAAATTACACAGTGGGTTTACTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTTGATCATCCCAGCACAGAAATTACACAGTGGGTTTACTTAGA  50

seq1  AACTCCTTATTGAAGAATTTTCTTGCTTCAACATTACTGAGGGAAACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTATTGAAGAATTTTCTTGCTTCAACATTACTGAGGGAAACAGA  100

seq1  GCAACGAGATGGGTTCTGTCTTCTGTATTCAATGCTCTCAACAATGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGAGATGGGTTCTGTCTTCTGTATTCAATGCTCTCAACAATGGCAT  150

seq1  CCTTTATCACCTGCCAAAAGACACAGAAAATTAATGATGAGCACAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATCACCTGCCAAAAGACACAGAAAATTAATGATGAGCACAGCTAT  200

seq1  AAATCTCTGAAACATTCGTTGGTTGAAAACAAAAGCCTCGTTTCTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTGAAACATTCGTTGGTTGAAAACAAAAGCCTCGTTTCTTTCTG  250

seq1  TCTTTTATTTTCTTTGCAAGTGTGTGTGTGTGTGTGTGGTGTATGTG  297
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTTTCTTTGCAAGTGTGTGTGTGTGTGTGTGGTGTATGTG  297

seq1: chr1_151862678_151863481
seq2: B6Ng01-073O20.g_68_876 (reverse)

seq1  CACACACACACACACACACACACACATGCACTCACACACATACTT-ACAC  49
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAAACACACACACACACACACACACATGCACTCACACACATACTTAACAC  50

seq1  GTGCACTCTGCACACATTTATCTCCTATTCATGGT-AAAACGCATAGTTA  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGCACTCTGCACACATTTATCTCCTATTCATGGTAAAAACGCATAGTTA  100

seq1  CAAGACAGCAAATTTTTGAAACTTCTGCTTTGTATATATATGTGG-AATG  147
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAAGACAGCAAATTTTTGAAACTTCTGCTTTGTATATATATGTGGAAATG  150

seq1  TCCCTT-AAAGGTTGCAATCCAAGTAGAAGAGCTGAGTAAATATGTGAAG  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAAAAGGTTGCAATCCAAGTAGAAGAGCTGAGTAAATATGTGAAG  200

seq1  GGG-AAACTGGCATTACTAAGTTTATCAAATCTGAATTGTGAACACAGCA  245
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAACTGGCATTACTAAGTTTATCAAATCTGAATTGTGAACACAGCA  250

seq1  TTCAGCCTGATGAATTATGCACCCACTACCTCTTTCCCTTACTTTCTTTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTGATGAATTATGCACCCACTACCTCTTTCCCTTACTTTCTTTA  300

seq1  CTCTGAATGGAGAGCAGAGGACAATACTCAAGTCTTAGGGCTTGGCAACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATGGAGAGCAGAGGACAATACTCAAGTCTTAGGGCTTGGCAACA  350

seq1  AGTACTTGTACCCACTGAGCCACCTTCTGGCTCTCTTCCACTACTGTTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTGTACCCACTGAGCCACCTTCTGGCTCTCTTCCACTACTGTTAA  400

seq1  GACATGGAAAAGTTCATTGTGAATGGCCTTTTCTATTTCTAAGGCCACGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAAAAGTTCATTGTGAATGGCCTTTTCTATTTCTAAGGCCACGT  450

seq1  AGTTCTACAGTCACATTTTCCTGTCTTCGGTCCAGGATATGTATTATTCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACAGTCACATTTTCCTGTCTTCGGTCCAGGATATGTATTATTCC  500

seq1  TGTCTCAGAACTGTAAATATTTCCTGCATCACACTGGAATGATAGTATCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGAACTGTAAATATTTCCTGCATCACACTGGAATGATAGTATCT  550

seq1  CTAGATTTTTCCAAGGGTTGTCATTCTTTCGTATATTTGAAATTTAAGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTTTCCAAGGGTTGTCATTCTTTCGTATATTTGAAATTTAAGTC  600

seq1  CGGTAAGCTGCTCATTGTGAGTAATTCCATTAAAAGTCTTTTTAAAAGTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAAGCTGCTCATTGTGAGTAATTCCATTAAAAGTCTTTTTAAAAGTC  650

seq1  ACTGTGGCATTTCCACATGCAAATGCTTTGATTATACTTACCTCTCTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCATTTCCACATGCAAATGCTTTGATTATACTTACCTCTCTATT  700

seq1  GCTTCTTCTTACCCTTCTTCCTTCTGTGCTTTCCTGTTCCCCTCCCACAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCTTACCCTTCTTCCTTCTGTGCTTTCCTGTTCCCCTCCCACAT  750

seq1  CCTGAGCACTTGTTTTTACTCCCCTTTCTTTTGTTTGATTTTCGTCCCTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCACTTGTTTTTACTCCCCTTTCTTTTGTTTGATTTTCGTCCCTC  800

seq1  AATGAATTC  804
      |||||||||
seq2  AATGAATTC  809