BAC Information

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BAC

Clone NameB6Ng01-074A08
Chromosome1 (Build37)7 (Build37)
Map Location 85,054,566 - 85,055,08199,804,870 - 99,805,988
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317
Downstream geneLOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A08.bB6Ng01-074A08.g
ACCDH890985DH890986
length1,0131,106
definitionDH890985|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A08, 5' end.DH890986|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(85,054,566 - 85,055,081)(99,804,870 - 99,805,988)
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgatcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttcttc
atggaggcactcagagctaatgagtttccctcttagaaatgctttcattg
ttgtcccaaagtt
gaattcaacacagaaatgtgcagtgaggccagcaagatagctcagtgggg
aaatgtgcctgccatcaagcctgatgatccctgtgcccacatgggcagaa
gagaaaagtgcttcccaccagttgaccttgacctcaccatggcacatctg
cataccaacacacacaaacacacaaaaatacaattaataaaaaaacagtt
tagtggctgtcagtagagtgcttgcctatcacacacaaagcccttgttta
acccccagcactgggaacaatgggaacgcctgtagttccagcactccata
ggtggagacaggagactcaagttcaaagtcacccactggtacacagagct
cgctatcagtcaatgctaaatgagagctttaaaaaaaaaaaagggggggg
ggtgatgctgaaaagatgcttttgttgttagaagtactttctgttaagct
ctttcagagtacctaagttcaggtcccagcatatatatgaaacagcccac
aggagctccagtgccccgtgtctgacctgtaagttacctggacacccttg
aaaagacaggcacataacacataaattatgatcttttgaaaataaaataa
gtgcacatattccattagagagaaggaaacggaaacgattaagagctaca
atcattttgagtttaagtggcaaacatcaactcccaaaaaaaaactctca
cctcactttcctaatactcaggtgttacattaacaacttattccataaag
tacattcttaaagcttttcccaaatactaaaacatttaaaaaaaaaaaga
aaaagaaaaaaaagaaaagaaaaatttaagtcaaccttgaaattaacctc
cacagacagaatttgagagcagcctagactgcaaatctgtcctaaaagtt
tacttacctacataattaacacaactttagagctggacagcttacctgtt
gagatgcctgaatatttcctactgatattggtgtaggcaaattgccaaag
tttccaaactgagactctgagatcttttcatcaaatagtgttcagagctc
tgtaatgggaatttggaatctgaatttccagggccatgtgtccattaaat
tggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_85054566_85055081
seq2: B6Ng01-074A08.b_42_557 (reverse)

seq1  GTCCCACATCCCCTAAAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATATCCCCTAAAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCC  50

seq1  AAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTT  100

seq1  CAAAGAAGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAG  150

seq1  TAGAAAGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATA  200

seq1  CCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTC  250

seq1  TCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAA  300

seq1  TCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATT  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATCACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATT  350

seq1  CCAGGAATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCA  400

seq1  CTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTGGATG  450

seq1  CAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTCTG  500

seq1  GAAAGATCAGGAATTC  516
      ||||||||||||||||
seq2  GAAAGATCAGGAATTC  516

seq1: chr7_99804870_99805988
seq2: B6Ng01-074A08.g_68_1173

seq1  GAATTCAACACAGAAATGTGCAGTGAGGCCAGCAAGATAGCTCAGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACAGAAATGTGCAGTGAGGCCAGCAAGATAGCTCAGTGGGG  50

seq1  AAATGTGCCTGCCATCAAGCCTGATGATCCCTGTGCCCACATGGGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGCCTGCCATCAAGCCTGATGATCCCTGTGCCCACATGGGCAGAA  100

seq1  GAGAAAAGTGCTTCCCACCAGTTGACCTTGACCTCACCATGGCACATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTGCTTCCCACCAGTTGACCTTGACCTCACCATGGCACATCTG  150

seq1  CATACCAACACACACAAACACACAAAAATACAATTAATAAAAAAACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAACACACACAAACACACAAAAATACAATTAATAAAAAAACAGTT  200

seq1  TAGTGGCTGTCAGTAGAGTGCTTGCCTATCACACACAAAGCCCTTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTGTCAGTAGAGTGCTTGCCTATCACACACAAAGCCCTTGTTTA  250

seq1  ACCCCCAGCACTGGGAACAATGGGAACGCCTGTAGTTCCAGCACTCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGCACTGGGAACAATGGGAACGCCTGTAGTTCCAGCACTCCATA  300

seq1  GGTGGAGACAGGAGACTCAAGTTCAAAGTCACCCACTGGTACACAGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGACAGGAGACTCAAGTTCAAAGTCACCCACTGGTACACAGAGCT  350

seq1  CGCTATCAGTCAATGCTAAATGAGAGCTTTAAAAAAAAAAAAGGGGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTATCAGTCAATGCTAAATGAGAGCTTTAAAAAAAAAAAAGGGGGGGG  400

seq1  GGTGATGCTGAAAAGATGCTTTTGTTGTTAGAAGTACTTTCTGTTAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGCTGAAAAGATGCTTTTGTTGTTAGAAGTACTTTCTGTTAAGCT  450

seq1  CTTTCAGAGTACCTAAGTTCAGGTCCCAGCATATATATGAAACAGCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGTACCTAAGTTCAGGTCCCAGCATATATATGAAACAGCCCAC  500

seq1  AGGAGCTCCAGTGCCCCGTGTCTGACCTGTAAGTTACCTGGACACCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCCAGTGCCCCGTGTCTGACCTGTAAGTTACCTGGACACCCTTG  550

seq1  AAAAGACAGGCACATAACACATAAATTATGATCTTTTGAAAATAAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGGCACATAACACATAAATTATGATCTTTTGAAAATAAAATAA  600

seq1  GTGCACATATTCCATTAGAGAGAAGGAAACGGAAACGATTAAGAGCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATATTCCATTAGAGAGAAGGAAACGGAAACGATTAAGAGCTACA  650

seq1  ATCATTTTGAGTTTAAGTGGCAAACATCAACTCCCAAAAAAAAACTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTGAGTTTAAGTGGCAAACATCAACTCCCAAAAAAAAACTCTCA  700

seq1  CCTCACTTTCCTAATACTCAGGTGTTACATTAACAACTTATTCCATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTTTCCTAATACTCAGGTGTTACATTAACAACTTATTCCATAAAG  750

seq1  TACATTCTTAAAGCTTTTCCCAAATACTAAAAACATTTAAAAAAAAAAAG  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACATTCTTAAAGCTTTTCCCAAATACT-AAAACATTTAAAAAAAAAAAG  799

seq1  AAAAAGAAAAAAAAGAAAAGAAAAAAATTAAGTCAACCTTGAAAATTAAC  850
      |||||||||||||||||||| ||||| |||||||||||||| ||||||||
seq2  AAAAAGAAAAAAAAGAAAAG-AAAAATTTAAGTCAACCTTG-AAATTAAC  847

seq1  CTCCACAGACAGAATTTGAGAGCAGCCTAGACTGCAAATCTGTCCTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGACAGAATTTGAGAGCAGCCTAGACTGCAAATCTGTCCTAAAA  897

seq1  GTTTACTTACCTACATAATTAACACAACTTTAGAGCTGGACAGCTTACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTACCTACATAATTAACACAACTTTAGAGCTGGACAGCTTACCT  947

seq1  GTTGAGATGCCTGAATATTTCCTACTGATATTGGTGTAGGCAAATTGCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGATGCCTGAATATTTCCTACTGATATTGGTGTAGGCAAATTGCCA  997

seq1  AAGTTTCCAAACTGAGAACTCTGAAGATTCTTTTCATCAAAATAGTGTCC  1050
      |||||||||||||||| |||||| ||| |||||||||| ||||||||| |
seq2  AAGTTTCCAAACTGAG-ACTCTG-AGA-TCTTTTCATC-AAATAGTGTTC  1043

seq1  AGAAGCTCTGTTAATGGGATTTGGGAAATTCTG-ATTTCCAGGGCCATGT  1099
      || ||||||| |||||||| || ||||  |||| ||||||||||||||||
seq2  AG-AGCTCTG-TAATGGGAATTTGGAA--TCTGAATTTCCAGGGCCATGT  1089

seq1  GGTCCATTAAAATTTGGTCC  1119
       ||||||||||  |||||||
seq2  -GTCCATTAAA--TTGGTCC  1106