BAC Information

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BAC

Clone NameB6Ng01-074C03
Chromosome1 (Build37)
Map Location 124,831,435 - 124,960,880
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666971
Downstream geneLOC666983, Dpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074C03.bB6Ng01-074C03.g
ACCDH891066DH891067
length1,146289
definitionDH891066|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C03, 5' end.DH891067|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,831,435 - 124,832,586)(124,960,592 - 124,960,880)
sequence
gaattcaacagtgacaaataaccttcagatagagtggcagttaattttct
cctctctcctttcctgtgttgagtcttctctttttctgccctcctctcct
ctcttctcttatctctcttcttcaaaccctcatttctttttcctttctct
cattttccttttgagaataacacattattctttgaaactaacaataagaa
atatgagtgtacgaatgtccaaaatgtcatgaatagtaaagtactatgac
ataagataacattttaatgagaaactatggagtcacaagacatcttttat
ttgatcagattgaagagttatataattaatgacatccttttcaagaggaa
gctcccagagacaattggcagttgactgatatatgtgaagtagttttatt
tcctgaaggaattttttattacaaagttttattatttatatgtcagaatg
tacgtacatgtgtggaagatcatagaggcgaaagagagtgttggattttc
tggagcatgagttgcagatttttttttgacatattctatataagtactag
gagcaatttgtaagagcagttagcaagtctgaaataccagcttgtgttca
tagatgatgaacattatttacaaacttcccaaagagttttgtcaatgatt
ttctttttttttctttttttaattaggtattttcctcgtttacatttcca
atgctatcccaaaagtccccatacccacccccccaatcccttacccaccc
actccccctttttggccctggcgttcccctgtactggggcatatgaagtt
tgcaagtccaaagggcctctctttccagtgatggctgactaggccatctt
ttgatacatatgcagctagagacaagagctccagggtactggttagttca
tattgttgttccacatatagggttgcagatccctttagctccttgggtac
tttctctagctcctccattgggggccgtgtgacccatccaatagctgact
gggagcatccacttctgtgtttgctaaggcccagcatagtctacaagaaa
cagctatatcctggtccttcagcaaatcttgctagttgatggcatagggt
gtcagcgttggaagctatatgggatggaatcctgatatgcaatcac
acattttcatacttggttaaatgccacctctttgctataagccttcatga
gtgctcttaccacactgaaagaaagatgatgtctctacagtatgtaattg
ccattcctaaactctatcaatgaattttgcttatttttgagagctaaaac
tatcagttatacaatgataaatttagaggcatgaacatagtagaggctca
ggagatacttgatgagtaagtgatacaagacccacagagacagagaaagg
gtgggaaaatatgagtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_124831435_124832586
seq2: B6Ng01-074C03.b_44_1189

seq1  GAATTCAACAGTGACAAATAACCTTCAGATAGAGTGGCAGTTAATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTGACAAATAACCTTCAGATAGAGTGGCAGTTAATTTTCT  50

seq1  CCTCTCTCCTTTCCTGTGTTGAGTCTTCTCTTTTTCTGCCCTCCTCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCCTTTCCTGTGTTGAGTCTTCTCTTTTTCTGCCCTCCTCTCCT  100

seq1  CTCTTCTCTTATCTCTCTTCTTCAAACCCTCATTTCTTTTTCCTTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTTATCTCTCTTCTTCAAACCCTCATTTCTTTTTCCTTTCTCT  150

seq1  CATTTTCCTTTTGAGAATAACACATTATTCTTTGAAACTAACAATAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCTTTTGAGAATAACACATTATTCTTTGAAACTAACAATAAGAA  200

seq1  ATATGAGTGTACGAATGTCCAAAATGTCATGAATAGTAAAGTACTATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTGTACGAATGTCCAAAATGTCATGAATAGTAAAGTACTATGAC  250

seq1  ATAAGATAACATTTTAATGAGAAACTATGGAGTCACAAGACATCTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATAACATTTTAATGAGAAACTATGGAGTCACAAGACATCTTTTAT  300

seq1  TTGATCAGATTGAAGAGTTATATAATTAATGACATCCTTTTCAAGAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAGATTGAAGAGTTATATAATTAATGACATCCTTTTCAAGAGGAA  350

seq1  GCTCCCAGAGACAATTGGCAGTTGACTGATATATGTGAAGTAGTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGAGACAATTGGCAGTTGACTGATATATGTGAAGTAGTTTTATT  400

seq1  TCCTGAAGGAATTTTTTATTACAAAGTTTTATTATTTATATGTCAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGGAATTTTTTATTACAAAGTTTTATTATTTATATGTCAGAATG  450

seq1  TACGTACATGTGTGGAAGATCATAGAGGCGAAAGAGAGTGTTGGATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTACATGTGTGGAAGATCATAGAGGCGAAAGAGAGTGTTGGATTTTC  500

seq1  TGGAGCATGAGTTGCAGATTTTTTTTTGACATATTCTATATAAGTACTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCATGAGTTGCAGATTTTTTTTTGACATATTCTATATAAGTACTAG  550

seq1  GAGCAATTTGTAAGAGCAGTTAGCAAGTCTGAAATACCAGCTTGTGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTTGTAAGAGCAGTTAGCAAGTCTGAAATACCAGCTTGTGTTCA  600

seq1  TAGATGATGAACATTATTTACAAACTTCCCAAAGAGTTTTGTCAATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATGAACATTATTTACAAACTTCCCAAAGAGTTTTGTCAATGATT  650

seq1  TTCTTTTTTTTTCTTTTTTTAATTAGGTATTTTCCTCGTTTACATTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTCTTTTTTTAATTAGGTATTTTCCTCGTTTACATTTCCA  700

seq1  ATGCTATCCCAAAAGTCCCCATACCCACCCCCCCAATCCCTTACCCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCCCAAAAGTCCCCATACCCACCCCCCCAATCCCTTACCCACCC  750

seq1  ACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATGAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATGAAGTT  800

seq1  TGCAAGTCCAAAGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTCCAAAGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTT  850

seq1  TTGATACATATGCAGCTAGAGACAAGAGCTCCAGGGTACTGGTTAGTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACATATGCAGCTAGAGACAAGAGCTCCAGGGTACTGGTTAGTTCA  900

seq1  TATTGTTGTTCCACATATAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTAC  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATTGTTGTTCCACATATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTAC  950

seq1  TTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACT  1000

seq1  GTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTCACAAGAA  1050
      | |||||||||||||||||||||||| | ||||||||||||| |||||||
seq2  GGGAGCATCCACTTCTGTGTTTGCTAAGGCCCAGCATAGTCT-ACAAGAA  1049

seq1  ACAGCTATATCTGGGTCCTTACAGCAAATTCTTGCTAGT--ATGTGCA-A  1097
      |||||||||||  ||||||| ||||||| ||||||||||  ||| ||| |
seq2  ACAGCTATATCCTGGTCCTT-CAGCAAA-TCTTGCTAGTTGATG-GCATA  1096

seq1  TGGTGTCAGCGTTTGGAAGCTAATTATGGGATGGATCCCTGGATATGGCA  1147
       |||||||||| ||||||||||  |||||||||||  ||| ||||| |||
seq2  GGGTGTCAGCG-TTGGAAGCTA--TATGGGATGGAATCCT-GATAT-GCA  1141

seq1  ATCAC  1152
      |||||
seq2  ATCAC  1146

seq1: chr1_124960592_124960880
seq2: B6Ng01-074C03.g_73_361 (reverse)

seq1  CACACACACACACACACACACACACTCATATTTTCCCACCCTTTCTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACTCATATTTTCCCACCCTTTCTCTGT  50

seq1  CTCTGTGGGTCTTGTATCACTTACTCATCAAGTATCTCCTGAGCCTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGGTCTTGTATCACTTACTCATCAAGTATCTCCTGAGCCTCTAC  100

seq1  TATGTTCATGCCTCTAAATTTATCATTGTATAACTGATAGTTTTAGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCATGCCTCTAAATTTATCATTGTATAACTGATAGTTTTAGCTCT  150

seq1  CAAAAATAAGCAAAATTCATTGATAGAGTTTAGGAATGGCAATTACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAGCAAAATTCATTGATAGAGTTTAGGAATGGCAATTACATAC  200

seq1  TGTAGAGACATCATCTTTCTTTCAGTGTGGTAAGAGCACTCATGAAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGACATCATCTTTCTTTCAGTGTGGTAAGAGCACTCATGAAGGCT  250

seq1  TATAGCAAAGAGGTGGCATTTAACCAAGTATGAAAATGT  289
      |||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAAAGAGGTGGCATTTAACCAAGTATGAAAATGT  289