BAC Information

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BAC

Clone NameB6Ng01-074D23
Chromosome1 (Build37)
Map Location 176,775,175 - 176,934,457
singlet/doubletdoublet
Overlap geneGrem2
Upstream geneLOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
Downstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074D23.bB6Ng01-074D23.g
ACCDH891147DH891148
length1,0571,134
definitionDH891147|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D23, 5' end.DH891148|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(176,775,175 - 176,776,228)(176,933,339 - 176,934,457)
sequence
gaattcagacaaattggagggcaaatccaaggctctggaccaaagaaaac
aaacataatcagagacaaccaggagacttgaaacatgccaatggagatgg
agctatggaaaaactgaagaaaaaaagtgttgaaaacatattaaaaatga
ataccaagaggaaaatcactctccacttacaggccctcaatagggggcac
ttctgttaaagctgtgtgctaactcatccactggttcgtcattcgtaccc
tgtgtacctctataaggcttgatacatgaagggggttattggtatcctag
agcaagaaaagggttcctgtaaccatgagagtaggagaatatataattat
gtgattgagtttttgaagagagccatgaaatcaagctttctagactgaat
caagggcctatgggaagagaaaggaaggattttttttttaatgtagttgt
gttttaatagacccaagaataaggacaatggaaaaaaaaaactaggttat
ttgggtcagtcaattggatgttgtgagaggagctgactaacctcggagat
cagaaaagagcagttgcatggggacaggatgtctatatgcactaggaaag
aaaatgccaacagagatggattgtaggacgccaagctatagttgtgtctg
gctgtgtgagagcaggaagatggcttgtctgtaaagcacagtagagctgg
tatcttacccagagcctgtgggtgcaactctgggacaaacaagctttcca
gcacagtacagaaaggaaacccatgagggtgaccttgcaaaatcataaag
aacaaaggctgccagaagttagcggagacaacatctggaaagccttccct
caatggcgagcccaggaagctccagtggacagttctgaacccatgggccc
cagagaaggctctggttaaatccagtgggtcctaaaacagatcagaggca
tgaaaggtgaaaagacgtgtttagggaagtggtggcatggggtgacatga
gtaacgagggagctgagccaatgggtcagagtcgtatagaatgcattata
tgagtgc
gaattcatttcaaccagttatagtaggtgagtcactgaacagaaagatcc
tttggacttggaaattggcaggggaagactttctcctaaagatattttca
tccaatatttgaattacataagtgtcaaaatatgtcatttggaagatggt
attttcagctcacacaaaattacttttttgaaaataatatttatagaata
tagaatatgtcattaattatctttattttaaaattagaaaactaagacac
atgtgtgcatcatgctttgtttgccaaactttaattttataattaacttc
tgtgattgtaatttgtcttcattgttaatgataatttctataacattgta
gcaattgagtaaaaatttatcgttctttggtctgcttctagaaagaaaca
tccttatttttttttaaagattgtcacaaaaagtctaatttagcaataaa
gttttaacaggtgaaaagacatatggataaataaaaatgagacaaagaaa
atacattaaaatatccaccaaagaacatagagggcctgagtatttgttct
atgaatgtttattttacattttacttaactctaatttttgaagaactgtt
tttattggcaataagaaaaacatttataccacaaccccttctcctaaggc
tccaggatcattggagaagaaagagctgaaaaagaaagagcaagaagtgg
ccaatgaaatggagtttccaggacacagcagggcagccacacaggtgaac
ccacagtggttgtgactggatgcacaagacaagtcagaccaaatctcaga
atggagaagagagtgcgatatgaggttgcacccctagccaaggaggtatg
aacaactaggggagggagaagcagttttctcaaagagtgtagtttttggg
aaagtcagcctttgttcctaagttgcttttgggtcatgtttgtttttatc
atagaaatagaaacctaactcagatggaatgtgtacagtaccttgaaaaa
cattgtaccattttacatatacagcttaaacaatctaaggatttggatgt
tctattgctagttcttgcaagtaaaaatcaagtttcacttggtggaacta
ttgctccagcctctgtggctggatttactccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176775175_176776228
seq2: B6Ng01-074D23.b_44_1100

seq1  GAATTCAGACAAATTGGAGGGCAAATCCAAGGCTCTGGACCAAAGAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACAAATTGGAGGGCAAATCCAAGGCTCTGGACCAAAGAAAAC  50

seq1  AAACATAATCAGAGACAACCAGGAGACTTGAAACATGCCAATGGAGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAATCAGAGACAACCAGGAGACTTGAAACATGCCAATGGAGATGG  100

seq1  AGCTATGGAAAAACTGAAGAAAAAAAGTGTTGAAAACATATTAAAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGAAAAACTGAAGAAAAAAAGTGTTGAAAACATATTAAAAATGA  150

seq1  ATACCAAGAGGAAAATCACTCTCCACTTACAGGCCCTCAATAGGGGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGAGGAAAATCACTCTCCACTTACAGGCCCTCAATAGGGGGCAC  200

seq1  TTCTGTTAAAGCTGTGTGCTAACTCATCCACTGGTTCGTCATTCGTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAAAGCTGTGTGCTAACTCATCCACTGGTTCGTCATTCGTACCC  250

seq1  TGTGTACCTCTATAAGGCTTGATACATGAAGGGGGTTATTGGTATCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCTCTATAAGGCTTGATACATGAAGGGGGTTATTGGTATCCTAG  300

seq1  AGCAAGAAAAGGGTTCCTGTAACCATGAGAGTAGGAGAATATATAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAAAAGGGTTCCTGTAACCATGAGAGTAGGAGAATATATAATTAT  350

seq1  GTGATTGAGTTTTTGAAGAGAGCCATGAAATCAAGCTTTCTAGACTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGAGTTTTTGAAGAGAGCCATGAAATCAAGCTTTCTAGACTGAAT  400

seq1  CAAGGGCCTATGGGAAGAGAAAGGAAGGATTTTTTTTTTAATGTAGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCTATGGGAAGAGAAAGGAAGGATTTTTTTTTTAATGTAGTTGT  450

seq1  GTTTTAATAGACCCAAGAATAAGGACAATGGAAAAAAAAAACTAGGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATAGACCCAAGAATAAGGACAATGGAAAAAAAAAACTAGGTTAT  500

seq1  TTGGGTCAGTCAATTGGATGTTGTGAGAGGAGCTGACTAACCTCGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCAGTCAATTGGATGTTGTGAGAGGAGCTGACTAACCTCGGAGAT  550

seq1  CAGAAAAGAGCAGTTGCATGGGGACAGGATGTCTATATGCACTAGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGAGCAGTTGCATGGGGACAGGATGTCTATATGCACTAGGAAAG  600

seq1  AAAATGCCAACAGAGATGGATTGTAGGACGCCAAGCTATAGTTGTGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCAACAGAGATGGATTGTAGGACGCCAAGCTATAGTTGTGTCTG  650

seq1  GCTGTGTGAGAGCAGGAAGATGGCTTGTCTGTAAAGCACAGTAGAGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGAGAGCAGGAAGATGGCTTGTCTGTAAAGCACAGTAGAGCTGG  700

seq1  TATCTTACCCAGAGCCTGTGGGTGCAACTCTGGGACAAACAAGCTTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTACCCAGAGCCTGTGGGTGCAACTCTGGGACAAACAAGCTTTCCA  750

seq1  GCACAGTACAGAAAGGAAACCCATGAGGGTGACCTTGCAAAATCATAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTACAGAAAGGAAACCCATGAGGGTGACCTTGCAAAATCATAAAG  800

seq1  AACAAAGGCTGCCAGAAGTTAGCGGAGACAACATCTGGAAAGCCTTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGCTGCCAGAAGTTAGCGGAGACAACATCTGGAAAGCCTTCCCT  850

seq1  CAATGGCGAGCCCAGGAAGCTCCAGTGGACAGTTCTGAACCCAT-GGCCC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAATGGCGAGCCCAGGAAGCTCCAGTGGACAGTTCTGAACCCATGGGCCC  900

seq1  CAGAGAAGGCTCTGGTTAAATCCAGTGGGTCCTAAAACAGATCAGAGGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGGCTCTGGTTAAATCCAGTGGGTCCTAAAACAGATCAGAGGCA  950

seq1  TG-AAGGTGAAAAAGAGGTGTTTAGGGAAGT-GTGGCAGGGGGTGACATG  997
      || |||||| |||||| |||||||||||||| |||||| |||||||||||
seq2  TGAAAGGTG-AAAAGACGTGTTTAGGGAAGTGGTGGCATGGGGTGACATG  999

seq1  AGTAAGGA-GGAGCTGAGCAATGGGGTCAGAGTCGTATAGAATGCATTAT  1046
      ||||| || |||||||||| |  |||||||||||||||||||||||||||
seq2  AGTAACGAGGGAGCTGAGCCAATGGGTCAGAGTCGTATAGAATGCATTAT  1049

seq1  ATGAGTGC  1054
      ||||||||
seq2  ATGAGTGC  1057

seq1: chr1_176933339_176934457
seq2: B6Ng01-074D23.g_66_1198 (reverse)

seq1  AAGGAGTAAAT-CAG-CACAGA-GCT-GAGC-ATAGTTCCA-CAAGTGAT  44
      ||||||||||| ||| |||||| ||| |||| ||||||||| ||||||| 
seq2  AAGGAGTAAATCCAGCCACAGAGGCTGGAGCAATAGTTCCACCAAGTGA-  49

seq1  AACTTGATTTTTACTTTGCAGGAACTAGC-ATAG-ACAT-CAAATCCTTA  91
      |||||||||||||| ||||| |||||||| |||| |||| ||||||||||
seq2  AACTTGATTTTTAC-TTGCAAGAACTAGCAATAGAACATCCAAATCCTTA  98

seq1  GA-TGTTTAAGCTGTATATGTAAAATGGTACAATGTTTT--CAGGTACTG  138
      || ||||||||||||||||||||||||||||||||||||   ||||||||
seq2  GATTGTTTAAGCTGTATATGTAAAATGGTACAATGTTTTTCAAGGTACTG  148

seq1  TACACATTCCATCTGAGTTAGGTTTCTATTTCTATGATAAAA--CAACAT  186
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TACACATTCCATCTGAGTTAGGTTTCTATTTCTATGATAAAAACAAACAT  198

seq1  GA-CCAAAAGCAACTTAGGAACAAAGGCTGACTTT-CCAAAAACTACACT  234
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACCCAAAAGCAACTTAGGAACAAAGGCTGACTTTCCCAAAAACTACACT  248

seq1  CTTTGAGAAAACTGCTTCTCCCTCCCCTAGTTGTTCATACCTCCTTGGCT  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAAAACTGCTTCTCCCTCCCCTAGTTGTTCATACCTCCTTGGCT  298

seq1  AGGGGTGCAACCTCATATCGCACTCTCTTCTCCATTCTGAGATTTGGTCT  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCAACCTCATATCGCACTCTCTTCTCCATTCTGAGATTTGGTCT  348

seq1  GACTTGTCTTGTGCATCCAGTCACAACCACTGTGGGTTCACCTGTGTGGC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTCTTGTGCATCCAGTCACAACCACTGTGGGTTCACCTGTGTGGC  398

seq1  TGCCCTGCTGTGTCCTGGAAACTCCATTTCATTGGCCACTTCTTGCTCTT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCTGTGTCCTGGAAACTCCATTTCATTGGCCACTTCTTGCTCTT  448

seq1  TCTTTTTCAGCTCTTTCTTCTCCAATGATCCTGGAGCCTTAGGAGAAGGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCAGCTCTTTCTTCTCCAATGATCCTGGAGCCTTAGGAGAAGGG  498

seq1  GTTGTGGTATAAATGTTTTTCTTATTGCCAATAAAAACAGTTCTTCAAAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGTATAAATGTTTTTCTTATTGCCAATAAAAACAGTTCTTCAAAA  548

seq1  ATTAGAGTTAAGTAAAATGTAAAATAAACATTCATAGAACAAATACTCAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGTTAAGTAAAATGTAAAATAAACATTCATAGAACAAATACTCAG  598

seq1  GCCCTCTATGTTCTTTGGTGGATATTTTAATGTATTTTCTTTGTCTCATT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTATGTTCTTTGGTGGATATTTTAATGTATTTTCTTTGTCTCATT  648

seq1  TTTATTTATCCATATGTCTTTTCACCTGTTAAAACTTTATTGCTAAATTA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATCCATATGTCTTTTCACCTGTTAAAACTTTATTGCTAAATTA  698

seq1  GACTTTTTGTGACAATCTTTAAAAAAAAATAAGGATGTTTCTTTCTAGAA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTGTGACAATCTTTAAAAAAAAATAAGGATGTTTCTTTCTAGAA  748

seq1  GCAGACCAAAGAACGATAAATTTTTACTCAATTGCTACAATGTTATAGAA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCAAAGAACGATAAATTTTTACTCAATTGCTACAATGTTATAGAA  798

seq1  ATTATCATTAACAATGAAGACAAATTACAATCACAGAAGTTAATTATAAA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTAACAATGAAGACAAATTACAATCACAGAAGTTAATTATAAA  848

seq1  ATTAAAGTTTGGCAAACAAAGCATGATGCACACATGTGTCTTAGTTTTCT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTTTGGCAAACAAAGCATGATGCACACATGTGTCTTAGTTTTCT  898

seq1  AATTTTAAAATAAAGATAATTAATGACATATTCTATATTCTATAAATATT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAATAAAGATAATTAATGACATATTCTATATTCTATAAATATT  948

seq1  ATTTTCAAAAAAGTAATTTTGTGTGAGCTGAAAATACCATCTTCCAAATG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAAAAAGTAATTTTGTGTGAGCTGAAAATACCATCTTCCAAATG  998

seq1  ACATATTTTGACACTTATGTAATTCAAATATTGGATGAAAATATCTTTAG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTGACACTTATGTAATTCAAATATTGGATGAAAATATCTTTAG  1048

seq1  GAGAAAGTCTTCCCCTGCCAATTTCCAAGTCCAAAGGATCTTTCTGTTCA  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTCTTCCCCTGCCAATTTCCAAGTCCAAAGGATCTTTCTGTTCA  1098

seq1  GTGACTCACCTACTATAACTGGTTGAAATGAATTC  1119
      |||||||||||||||||||||||||||||||||||
seq2  GTGACTCACCTACTATAACTGGTTGAAATGAATTC  1133