BAC Information

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BAC

Clone NameB6Ng01-074H17
Chromosome1 (Build37)
Map Location 97,248,697 - 97,249,656
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666025, LOC100040685, LOC383603, Tmem157
Downstream geneLOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074H17.bB6Ng01-074H17.g
ACCDH891319DH891320
length9661,166
definitionDH891319|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H17, 5' end.DH891320|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctcttcattctcccaatgaaaacatagcattacagttcctat
tctttgattgagtaactccatgggactttctgtaatagtggaagctattt
tacaatcaaggataattgttatagagaagatcaacaccaaaataaaatgg
agttaatataggttgctgtgtcaggtgtagattccttcctatggcatggg
tcagtagttggaccaatcattggttggtcattcccacaatttctgtgtca
ccttttccccagaaaagcttatagggaggacattgtataggccaaatatt
ttgtggttgggttggtgacccaatccctccactggaagccttgcctgatg
acagaagaagctagtttaggtccatactcctcattgctggggtcttagct
agggtcaccctggtagattccggggagtttccattgtaccaagtcactaa
attgcccctgaaatgacctccataattctagtcttcttttccccttacct
cccccccacacacacctgtttcctcctgttcccatcactacccatcccaa
gtctacccatgaactattctgttctgccttcccagggagatccatgcatc
cttccttgagccttttttattatatggcttttccaggtctgtggattata
acatgataatcctttactgtacagctaatttccacttttaagtgagtaca
tatcatatttgtatttctgggttttagttacttcactcaggctgattttt
ttttcaagttcattccatttgcctgcaaatttaattttattctttttaac
agctgagtaattatccattgtgtaaatgtgccacattttctttatgcatc
cttcagttgaaaacatctggggatagggaattttccgaggggaaactagg
aaaggggatacatttgaaatttaaataaagtattgagagaagaagagaga
gagagagagagagaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatatcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtacccaaggagctaaagggatctgcaacccta
atagtggatcaacattatgactaaccagtacccgagctccttgactctag
ctgcaatgtatcaaaaagatggcttagtcgcatcactgaaagaagaggcc
cattgaaccatataaactttatatgctcagaacaggggaaatcgtctagg
ccaaaaaagggaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97248697_97249656
seq2: B6Ng01-074H17.b_39_1000 (reverse)

seq1  TCTCTCTCTCTCTCTCTCT--TTCTCTCAATACTTTATTTAAATTTCAAA  48
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTTCTTCTCTCAATACTTTATTTAAATTTCAAA  50

seq1  TGTTATCCCCTTTCCTAGTTTCCCCTCGGAAAATTCCCTATCCCCAGATG  98
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TATCCCCTTTCCTAGTTTCCCCTCGGAAAATTCCCTATCCCCAGATG  99

seq1  TTTTCAACTGAAGGATGCATAAAGAAAATGTGGCACATTTACACAATGGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTGAAGGATGCATAAAGAAAATGTGGCACATTTACACAATGGA  149

seq1  TAATTACTCAGCTGTTAAAAAGAATAAAATTAAATTTGCAGGCAAATGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTCAGCTGTTAAAAAGAATAAAATTAAATTTGCAGGCAAATGGA  199

seq1  ATGAACTTG-AAAAAAAATCAGCCTGAGTGAAGTAACTAAAACCCAGAAA  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTGAAAAAAAAATCAGCCTGAGTGAAGTAACTAAAACCCAGAAA  249

seq1  TACAAATATGATATGTACTCACTTAAAAGTGGAAATTAGCTGTACAGTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATATGATATGTACTCACTTAAAAGTGGAAATTAGCTGTACAGTAA  299

seq1  AGGATTATCATGTTATAATCCACAGACCTGGAAAAGCCATATAATAAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATCATGTTATAATCCACAGACCTGGAAAAGCCATATAATAAAAA  349

seq1  AGGCTCAAGGAAGGATGCATGGATCTCCCTGGGAAGGCAGAACAGAATAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAAGGAAGGATGCATGGATCTCCCTGGGAAGGCAGAACAGAATAG  399

seq1  TTCATGGGTAGACTTGGGATGGGTAGTGATGGGAACAGGAGGAAACAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGGTAGACTTGGGATGGGTAGTGATGGGAACAGGAGGAAACAGGT  449

seq1  GTGTGTGGGGGGGAGGTAAGGGGAAAAGAAGACTAGAATTATGGAGGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGGGGGGAGGTAAGGGGAAAAGAAGACTAGAATTATGGAGGTCA  499

seq1  TTTCAGGGGCAATTTAGTGACTTGGTACAATGGAAACTCCCCGGAATCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGGGCAATTTAGTGACTTGGTACAATGGAAACTCCCCGGAATCTA  549

seq1  CCAGGGTGACCCTAGCTAAGACCCCAGCAATGAGGAGTATGGACCTAAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGACCCTAGCTAAGACCCCAGCAATGAGGAGTATGGACCTAAAC  599

seq1  TAGCTTCTTCTGTCATCAGGCAAGGCTTCCAGTGGAGGGATTGGGTCACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTTCTGTCATCAGGCAAGGCTTCCAGTGGAGGGATTGGGTCACC  649

seq1  AACCCAACCACAAAATATTTGGCCTATACAATGTCCTCCCTATAAGCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACCACAAAATATTTGGCCTATACAATGTCCTCCCTATAAGCTTT  699

seq1  TCTGGGGAAAAGGTGACACAGAAATTGTGGGAATGACCAACCAATGATTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAAAAGGTGACACAGAAATTGTGGGAATGACCAACCAATGATTG  749

seq1  GTCCAACTACTGACCCATGCCATAGGAAGGAATCTACACCTGACACAGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACTACTGACCCATGCCATAGGAAGGAATCTACACCTGACACAGCA  799

seq1  ACCTATATTAACTCCATTTTATTTTGGTGTTGATCTTCTCTATAACAATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATTAACTCCATTTTATTTTGGTGTTGATCTTCTCTATAACAATT  849

seq1  ATCCTTGATTGTAAAATAGCTTCCACTATTACAGAAAGTCCCATGGAGTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGATTGTAAAATAGCTTCCACTATTACAGAAAGTCCCATGGAGTT  899

seq1  ACTCAATCAAAGAATAGGAACTGTAATGCTATGTTTTCATTGGGAGAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATCAAAGAATAGGAACTGTAATGCTATGTTTTCATTGGGAGAATG  949

seq1  AAGAGATGAATTC  960
      |||||||||||||
seq2  AAGAGATGAATTC  962