BAC Information

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BAC

Clone NameB6Ng01-075A04
Chromosome1 (Build37)
Map Location 14,363,533 - 14,364,613
singlet/doubletsinglet
Overlap genenone
Upstream geneNcoa2, LOC665341, LOC100039812, EG621685, Tram1, Lactb2, Xkr9, LOC100039843, EG433273, LOC100039859, LOC100039869, Eya1
Downstream geneLOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075A04.bB6Ng01-075A04.g
ACCDH891695DH891696
length1,2411,065
definitionDH891695|Mus musculus domesticus DNA, BAC clone: B6Ng01-075A04, 5' end.DH891696|Mus musculus domesticus DNA, BAC clone: B6Ng01-075A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaaggcattgctgtt
ctattcaggaattttccccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaagagatagaaatggatcaattccc
attcttttacatgataattgccagttgtgccagcaccatttgttgaaaat
gctctcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtggattcatctctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagtttaagtccggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctcggttttttgttattccagatga
atctgccgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttgacaagatggccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttctttagagacttgaagttcttatcatac
agatctttcacttccttagttagagtcactgcaaggtattttatattatt
tgtgactattgagaagggtgttgtttccctaatttctcagcctgtttatc
ctttgtgtacaaaaggccattgacttgtttgagtattttatatcagctac
ttattgaaactgttttatcagcttagagttctcctggtgattttagggtc
acttatatatactttcatattcatctgcaaaagggaaattgacttcttct
ttcatgatccttgattcgttgtgttcatgctggcaggactcagatcagtt
gaataggtagggcagagtgggacatagctctggtctagttg
gaattctagacacttaaaatatttaataagattaaaataagtagtatggg
gaaggaagcatttccaggcttgaccaatgtcaatggtgtacagtggtttt
atgaaaacataacaactgtagtaatgcctggaatgtggaacatgttcatg
ggtggcaggaaaggagacccttacaagggctccagagactctggagtgaa
cactgcatatataggaacacagctaatattggttcagccctagatctggg
aagacagataacaggggaaactgatctctagctgcagcttatacagcaat
atgccaaaatgtgcacaaaagggctgaatctgtacagtgaggtttgcagc
aattctttatggatctgactgaggagagcgggtctcagagctagtatcca
gacagaagattctgaaaaagtgattaactagagcaggcaatgagtcgaat
tcaaatagctaggctcccatgaagcttcacggaccaggaaaggtcaggca
cctaaagaggggccagagaggggttctactaagttgctgaatcagttgag
cccacaaagcctagaatccacagagctcaatgtaagtaagactaaaacct
tttccacacataatataagatgttaccaagctgaaactagacccagaata
ttcacagctcttacccatactcaactgtcacaccccctacacacactctc
tattgaaatgcactgctcaaatctgtttgaataagttaatgagaagaatg
gaaacatgttattacaatacgatactaaatgctgaaattgtagttgaaga
ctatgaaagaagattggaaatacctctctgttgaacttcagtttcaagaa
gctatgcatctgttgggattctggtcatccagatggtatctcaagaacat
tttgaatgattttgacccattgtttataacattcacagtctccttcatgc
tttcatggagctacttagcttatcattcattctggtctaatgctgaaagt
agagctgtaaagcccatgctgtcatcatatactaagactttcagttctaa
catcttatcagtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14363533_14364613
seq2: B6Ng01-075A04.g_69_1133

seq1  GAATTCTAGACACTTAAAATATTTAATAAGATTAAAATAAGTAGTATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACACTTAAAATATTTAATAAGATTAAAATAAGTAGTATGGG  50

seq1  GAAGGAAGCATTTCCAGGCTTGACCAATGTCAATGGTGTACAGTGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGCATTTCCAGGCTTGACCAATGTCAATGGTGTACAGTGGTTTT  100

seq1  ATGAAAACATAACAACTGTAGTAATGCCTGGAATGTGGAACATGTTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACATAACAACTGTAGTAATGCCTGGAATGTGGAACATGTTCATG  150

seq1  GGTGGCAGGAAAGGAGACCCTTACAAGGGCTCCAGAGACTCTGGAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGGAAAGGAGACCCTTACAAGGGCTCCAGAGACTCTGGAGTGAA  200

seq1  CACTGCATATATAGGAACACAGCTAATATTGGTTCAGCCCTAGATCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATATATAGGAACACAGCTAATATTGGTTCAGCCCTAGATCTGGG  250

seq1  AAGACAGATAACAGGGGAAACTGATCTCTAGCTGCAGCTTATACAGCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATAACAGGGGAAACTGATCTCTAGCTGCAGCTTATACAGCAAT  300

seq1  ATGCCAAAATGTGCACAAAAGGGCTGAATCTGTACAGTGAGGTTTGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAAATGTGCACAAAAGGGCTGAATCTGTACAGTGAGGTTTGCAGC  350

seq1  AATTCTTTATGGATCTGACTGAGGAGAGCGGGTCTCAGAGCTAGTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTATGGATCTGACTGAGGAGAGCGGGTCTCAGAGCTAGTATCCA  400

seq1  GACAGAAGATTCTGAAAAAGTGATTAACTAGAGCAGGCAATGAGTCGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGATTCTGAAAAAGTGATTAACTAGAGCAGGCAATGAGTCGAAT  450

seq1  TCAAATAGCTAGGCTCCCATGAAGCTTCACGGACCAGGAAAGGTCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAGCTAGGCTCCCATGAAGCTTCACGGACCAGGAAAGGTCAGGCA  500

seq1  CCTAAAGAGGGGCCAGAGAGGGGTTCTACTAAGTTGCTGAATCAGTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGAGGGGCCAGAGAGGGGTTCTACTAAGTTGCTGAATCAGTTGAG  550

seq1  CCCACAAAGCCTAGAATCCACAGAGCTCAATGTAAGTAAGACTAAAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAAGCCTAGAATCCACAGAGCTCAATGTAAGTAAGACTAAAACCT  600

seq1  TTTCCACACATAATATAAGATGTTACCAAGCTGAAACTAGACCCAGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACACATAATATAAGATGTTACCAAGCTGAAACTAGACCCAGAATA  650

seq1  TTCACAGCTCTTACCCATACTCAACTGTCACACCCCCTACACACACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTCTTACCCATACTCAACTGTCACACCCCCTACACACACTCTC  700

seq1  TATTGAAATGCACTGCTCAAATCTGTTTGAATAAGTTAATGAGAAGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAATGCACTGCTCAAATCTGTTTGAATAAGTTAATGAGAAGAATG  750

seq1  GAAACATGTTATTACAATACGATACTAAATGCTGAAATTGTAGTTGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGTTATTACAATACGATACTAAATGCTGAAATTGTAGTTGAAGA  800

seq1  CTATGAAAGAAGATTGGAAATACCTCTCTGTTGAACTTCAGTTTCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAAGAAGATTGGAAATACCTCTCTGTTGAACTTCAGTTTCAAGAA  850

seq1  GCTATGCATCTGTTGGGATTCTGGTCATCCAGATGGTATCTCAAGAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTATGCATCTGTTGGGATTCTGGTCATCCAGATGGTATCTCAAG-AACA  899

seq1  TTTTGAATGATTTTGACCCATTGTTTATAAACATTCACAGTCTCCTTCAT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTGAATGATTTTGACCCATTGTTTAT-AACATTCACAGTCTCCTTCAT  948

seq1  GCTTTCATGGAGCTACTTAGCTTATCATTCATTCTGGTCTTAATGGCCTG  1000
      ||||||||||||||||||||||||||||||||||||||| |||||  |||
seq2  GCTTTCATGGAGCTACTTAGCTTATCATTCATTCTGGTC-TAATG--CTG  995

seq1  AAAGTAGAGCTGTAAAGCCCAATGGCCTGTTCCAATTCATATACTAAAGA  1050
      |||||||||||||||||||| |||  ||||  ||  ||||||||| ||||
seq2  AAAGTAGAGCTGTAAAGCCC-ATG--CTGT--CA--TCATATACT-AAGA  1037

seq1  CTTTCAGTTTCTAAACCATCTATTCAGTCAT  1081
      ||||||| ||||||  |||||  ||||||||
seq2  CTTTCAG-TTCTAA--CATCTTATCAGTCAT  1065