BAC Information

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BAC

Clone NameB6Ng01-075B24
Chromosome1 (Build37)
Map Location 46,916,073 - 46,916,924
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855, Slc39a10
Downstream geneEG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075B24.g
ACCDH891771
length855
definitionDH891771|Mus musculus domesticus DNA, BAC clone: B6Ng01-075B24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttcctggaaattaaatgtaagcaactaatatggaatcaggcaa
gactaggttgggattgaaaaaatatgcccgaaaagatttaaagcgaaatt
cattattctgccttagaaaaacagcccaacgttgagggatagataaaatc
tcaagcaggactttgagtttctgttatatgcaagcgactgcattaagtag
ttgggataccagggtggacaaaatgattttctggcccttaaatagcttat
ggtctggtggaggaggtaattaaggaggtaattatagcatacaggggcaa
atgctaggctagagagaggtatggttgctatggcagcagaggtaaaaatg
ggttatactcaggctttagcaacatctgacatttgacttaagggtgagtg
aggagagccaggtaaaaacacggggtcatgagatgatgcacgccgatgag
tggtaccagtgaaagcatggttttcacttagggaactggaagggagccaa
acaatgctctctgtctctctgtcattctgtgtctctatgtgagtctgtcg
gtctctctgtgtcactctgtttctctatgtgtctatctgtgtgtgtgtgt
ctctgtctgtatgggtgggggcagtatttcattttgcatgaaggattagg
agatatgagacagacctggtaagcagggcctttgtgtaccatactaaggc
atctgactcccagaatgtaccatgatgcgcgggacaattttaagcaagtt
ggtactttttatcacaggcagtattcgaatatataacgctgttagcacaa
tacatttactctcctcccaaagatgcccttcttataactcacggacctgc
atata
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46916073_46916924
seq2: B6Ng01-075B24.g_65_919

seq1  GAATTCCTTCCTGGAAATTAAATGTAAGCAACTAATATGGAATCAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTGGAAATTAAATGTAAGCAACTAATATGGAATCAGGCAA  50

seq1  GACTAGGTTGGGATTGAAAAAATATGCCCGAAAAGATTTAAAGCGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGTTGGGATTGAAAAAATATGCCCGAAAAGATTTAAAGCGAAATT  100

seq1  CATTATTCTGCCTTAGAAAAACAGCCCAGCGTTGAGGGATAGATAAAATC  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATTATTCTGCCTTAGAAAAACAGCCCAACGTTGAGGGATAGATAAAATC  150

seq1  TCAAGCAGGACTTTGAGTTTCTGTTATATGCAAGCGACTGCATTAAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAGGACTTTGAGTTTCTGTTATATGCAAGCGACTGCATTAAGTAG  200

seq1  TTGGGATACCAGGGTGGACAAAATGATTTTCTGGCCCTTAAATAGCTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATACCAGGGTGGACAAAATGATTTTCTGGCCCTTAAATAGCTTAT  250

seq1  GGTCTGGTGGAGGAGGTAATTAAGGAGGTAATTATAGCATACAGTGGCAA  300
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTCTGGTGGAGGAGGTAATTAAGGAGGTAATTATAGCATACAGGGGCAA  300

seq1  ATGCTAGGCTAGAGAGAGGTATGGTTGCTATGGCAGCAGAGGTAAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGGCTAGAGAGAGGTATGGTTGCTATGGCAGCAGAGGTAAAAATG  350

seq1  GGTTATACTCAGGCTTTAGCAACATCTGACATTTGACTTAAGGGTGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATACTCAGGCTTTAGCAACATCTGACATTTGACTTAAGGGTGAGTG  400

seq1  AGGAGAGCCAGGTAAAAACACGGGGTCATGAGATGATGCACGCCGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGCCAGGTAAAAACACGGGGTCATGAGATGATGCACGCCGATGAG  450

seq1  TGGTACGAGTGAAAGCATGGTTTTCAGTTAGGGAACTGGAAGGGAGCCAA  500
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGTACCAGTGAAAGCATGGTTTTCACTTAGGGAACTGGAAGGGAGCCAA  500

seq1  ACAATGCTCTCTGTCTCTCTGTCTTTCTGTGTCTCTATGTGAGTCTGTCG  550
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAATGCTCTCTGTCTCTCTGTCATTCTGTGTCTCTATGTGAGTCTGTCG  550

seq1  GTCTCTCTGTGTCTCTCTGTTTCTCTATGTGTCTATCTGTGTGTGTGTGT  600
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTGTGTCACTCTGTTTCTCTATGTGTCTATCTGTGTGTGTGTGT  600

seq1  CTCTGTCTGTTTGGGTGGGGGCAGTATTTCATTTTGCATGAAGGATTAGG  650
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTGTATGGGTGGGGGCAGTATTTCATTTTGCATGAAGGATTAGG  650

seq1  AGAGATGAGACAGGACTGGTAAGCAGGGCCTTTGTGTACCAGGTTAAGGC  700
      ||| |||||||||  ||||||||||||||||||||||||||   ||||||
seq2  AGATATGAGACAGACCTGGTAAGCAGGGCCTTTGTGTACCATACTAAGGC  700

seq1  ATCTGAATACCAGAGTATATTAGGAGCCGCAGGAGAATTTTAAGCAGGCA  750
      |||||| | ||||| | ||  | ||  ||| ||| ||||||||||| |  
seq2  ATCTGACTCCCAGAATGTACCATGATGCGCGGGACAATTTTAAGCAAGTT  750

seq1  GGTGC-TATGAGCACAGGCAGTA-AGGAAGAT-TAGTGTGGTAGGCAGAA  797
      ||| | | | | |||||||||||   ||| || ||  |  ||  ||| ||
seq2  GGTACTTTTTATCACAGGCAGTATTCGAATATATAACGCTGTTAGCACAA  800

seq1  -GCAATTTGTCTCCTCCCCAAAGATGCCCTTCTTGTAATCCACGGACCTG  846
        || ||  |||||| |||||||||||||||||| |||  ||||||||||
seq2  TACATTTACTCTCCT-CCCAAAGATGCCCTTCTTATAACTCACGGACCTG  849

seq1  CATATA  852
      ||||||
seq2  CATATA  855