BAC Information

Click to search

BAC

Clone NameB6Ng01-075D08
Chromosome1 (Build37)
Map Location 8,130,468 - 8,131,365
singlet/doubletsinglet
Overlap genenone
Upstream genePcmtd1, LOC545302, LOC665063, LOC665069, LOC100039408
Downstream geneSntg1, LOC100039474, LOC620444, EG665007, LOC665103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075D08.bB6Ng01-075D08.g
ACCDH891829DH891830
length1,0241,223
definitionDH891829|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D08, 5' end.DH891830|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctacatgataaccaccagttcgtgccagcaccatttgttgaa
aatgctgtctttcttccactggatggttttagctcccttgtcgaagatca
agtgactataggtgagtgggttcatttctgggtcttcaattctattccac
tggtctatttacacaatggagtactactcacctattaaaaagaatgaatt
tatgaaattcctaggcaaatggatggacctggagggcatcatcctgagtg
aggtaacccaatcacaaaggaactcacacaatatgtactcactgataagt
ggatattagcccaaaacttaggatacccaagatataagatacaatttgct
aaacacatgaaactctagaagaatgaagatatatatatatttatatatag
tcttttaagaagtttttagtaattattgtgaatttcatatcatgcatccc
aatcccactcacttcatccccactctaaatctatccattgcccttgcacc
ctgccatacacaccaaaaataaatacataaataatgaaaaaaaaagtatt
gcagtggaagctgcagtgtgtcacatagtaaactccttcgcccaaacaga
tttgcttgcaaatattctctgccatgagtcttggtccggttcaaggcctt
tggattctgctatactatcaatactggattcctcttggaaattctattat
ttccctttgccatagagatgctgcagttttatttctacagggctggctct
ttcatgcactccagcagttattgtttgggtgggccacctcaaagcattgg
ttcctggcctgaatgctcagcccaaccactctcttgggccagtgtcccca
gaaccaactctcttgcttttgcccatgcaagaagcaagactaggtttctt
gcttttaaaccatcaaagccagctttcctgcacctatggcaccaggagca
gctctccagcactgccactgtgagggtggagctagctcacccaagtgcta
cagccagtaagaggcaggacagtt
gaattccaaatctaacaacaacaacaacaaaataattggaagcaacaatt
gcaacaattgcttttccttaatatagcttaatatcaatggatttaattcc
ccaataaaaagatatagactaacaaattggctatgtaaataggacccaac
aatttgctgcatacaggaaacctacttcagggacaaagaaatacattacc
tcagagtcaaaggctagaaaacaattttccaagcaagggatcctggaaac
aatctggagtagcctttctaatattgaataaaatcatctttcaatctaaa
gttatcaaaaaagataaggagagacacctcatactcatcaaatataaaac
ctgcaaagatgaaacctcaattctgaacatacatgttccaaatgcaagag
catccatattcataagagaaactttgctaaacctcaaagcacacattgca
ctgcatacaataatagtggcagaattcaacactgtgctctcactaatgga
cagatcctggaaacagaatctaaacagagacacagtgaaaccaacagaag
ttatgaaacaaatggatttaacagatatctacagaacatttcacactaaa
acaaaaggattcatattcttctcagcaccttatggtaccttctccaaaat
tgaccatataattggtcacaaaacaggcctccacagatacaaaatattga
aataatcccatgaatcctatcagatcaccacggactaaggctggtcttca
ataacaacatgaaagatataaagcccacatacatgtggaagctgaacaag
actctactcaatgatagctttttcatgatagaaataaagaaagaaattaa
agacgttttagagtttgatgaaaatgaagccacaacatacccaaacttat
gggacacaatgaaagcagttcttagaggaaaactcatagccctgagtgac
tccataaagaaactggagaaagcatacactagcagtttgacatacatctg
aaagttctagaacaaaaagaagcattttcacccagaggagtagatgtagc
aaataatcaaactcaagctgaattaccattgaaacaaaagtacttttcca
agatcaaccaacaaacaaacaccaacaaaactaaaaaaaaaaacggaacg
gtcttggaaaatagcgaatataacttagcctgacatacttcaggacaaca
cgagaaatggttttcttatgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8130468_8131365
seq2: B6Ng01-075D08.b_46_945

seq1  GAATTCTTCTACATGATAACCACCAGTT-GTGCCAGCACCATTTGTTGAA  49
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCTTCTACATGATAACCACCAGTTCGTGCCAGCACCATTTGTTGAA  50

seq1  AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA  100

seq1  AGTGACTATAGGTGAGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTATAGGTGAGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAC  150

seq1  TGGTCTATTTACACAATGGAGTACTACTCACCTATTAAAAAGAATGAATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTATTTACACAATGGAGTACTACTCACCTATTAAAAAGAATGAATT  200

seq1  TATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG  250

seq1  AGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGT  300

seq1  GGATATTAGCCCAAAACTTAGGATACCCAAGATATAAGATACAATTTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTAGCCCAAAACTTAGGATACCCAAGATATAAGATACAATTTGCT  350

seq1  AAACACATGAAACTCTAGAAGAATGAAGATATATATATATTTATATATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATGAAACTCTAGAAGAATGAAGATATATATATATTTATATATAG  400

seq1  TCTTTTAAGAAGTTTTTAGTAATTATTGTGAATTTCATATCATGCATCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAGAAGTTTTTAGTAATTATTGTGAATTTCATATCATGCATCCC  450

seq1  AATCCCACTCACTTCATCCCCACTCTAAATCTATCCATTGCCCTTGCACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCACTCACTTCATCCCCACTCTAAATCTATCCATTGCCCTTGCACC  500

seq1  CTGCCATACACACCAAAAATAAATACATAAATAATGAAAAAAAAAGTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATACACACCAAAAATAAATACATAAATAATGAAAAAAAAAGTATT  550

seq1  GCAGTGGAAGCTGCAGTGTGTCACATAGTAAACTCCTTCGCCCAAACAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGAAGCTGCAGTGTGTCACATAGTAAACTCCTTCGCCCAAACAGA  600

seq1  TTTGCTTGCAAATATTCTCTGCCATGAGTCTTGGTCCGGTTCAAGGCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGCAAATATTCTCTGCCATGAGTCTTGGTCCGGTTCAAGGCCTT  650

seq1  TGGATTCTGCTATACTATCAATACTGGATTCCTCTTGGAAATTCTATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCTGCTATACTATCAATACTGGATTCCTCTTGGAAATTCTATTAT  700

seq1  TTCCCTTTGCCATAGAGATGCTGCAGTTTTATTTCTACAGGGCTGGCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTGCCATAGAGATGCTGCAGTTTTATTTCTACAGGGCTGGCTCT  750

seq1  TTCATGCACTCCAGCAGTTATTGTTTGGGTGGGCCACCTCAAAGCATTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCACTCCAGCAGTTATTGTTTGGGTGGGCCACCTCAAAGCATTGG  800

seq1  TTCCTGGCCTGAATGCTCAGCCCAACCACTCTCTTGGGCCAGTGTCCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCCTGAATGCTCAGCCCAACCACTCTCTTGGGCCAGTGTCCCCA  850

seq1  GAACCAACTCTCTTGC-TTTGCCCATGCAAGAAGCAAGACTAGGTTTCTT  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAACCAACTCTCTTGCTTTTGCCCATGCAAGAAGCAAGACTAGGTTTCTT  900