BAC Information

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BAC

Clone NameB6Ng01-075L10
Chromosome1 (Build37)
Map Location 25,768,442 - 25,897,284
singlet/doubletdoublet
Overlap geneBai3
Upstream geneLmbrd1, 4930472D16Rik, LOC669171, LOC665595
Downstream gene4931408C20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L10.bB6Ng01-075L10.g
ACCDH892197DH892198
length1,158528
definitionDH892197|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L10, 5' end.DH892198|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,896,133 - 25,897,284)(25,768,442 - 25,768,975)
sequence
gaattcatggagtgcacattagctatctaatgatgcagagcagataatcc
ccaaatatagcaattataaacaaatatttggtttcttttagtttttgtag
gttgggaatccaggatcatctatgttggatggcttggctccaagtctcct
ctctggctgcaacttagatattagacttgtggctgttttctcaagattta
tctcaggactacttctgagctactcgggggatcaccttataatcaaattt
agatatgcgtctctataggactgctaagctaacactagtcaatttagtca
agaaatgatctataagaaaggacttctttgcaagttagaaaatagttatt
tttgttgtggtgatttccaacccttttatactttaaacttgcaaatgacg
tcccattacttttgatacattatagctgacagaagccactttctaagttt
atcctacatacctgttattgctgatagaatgggattttactgtaaccaaa
aattggtctgaacaggagaggactaagaccagggaggactcccatgcagg
agtagatgagaataggtgtggaaagtcaagcttgaagaaatctgacattt
ttgggggaaatttgtagtggaagtgagagacatttgcagtatataagtgg
aatggttgcaattatatcactcagaaatttgccactcttctattctagtt
tccacttcttctaagatgctgatgtagcaattttctcaggtttgaaattg
aaatattcttttctgaaaggaggtgggagactcaggcattgaaagctatt
taagaggattcaaggagctcaggaaggggcaagaccctcatttgtatttc
tcttgtctttctgctcataagaagacttcaagcactttgcttgaatatga
atggagaatggagatgtccccgcctccagttttttgtttttgtttttgtt
ttgtacctggatatggtggcagtactgagaaatatccttacttagaataa
gaattggctataactttgacatgcagcctttcatgatgtagaaattgtgt
ttatgtaattcctagtctcctcaagcttttctccatggattgatgtagga
ttttgttctgccttttcatatttaatggctgataaaatggtatattttgg
tcctcttg
atacccagttatgtttcactgagggtaaatttatcctggaaaatggcacg
attttctctagctcagatactaaaagggaggcagtccacctgcatggaca
gctgctacttcagaaaacctttgccaggaggcactatttgatagagttgt
gtgggcattatgtgtgttgttttcccctgacaaaaggcaagatgagttgg
acctgagatttgtgccttgatttgttttcatgccctgaaacttactagga
aacaaggcttggtgctggcattttatttgattctttccagagcaatgtta
ggattctttgtgaattgtttatctccctctaataatgcttaacatgaaaa
atcagccttctatacgtttctaattagttcttaacaaattttagcctctt
ttaggaaaagatatattcagctaatgactcagatataatctacattcctt
ttaatctacattcctgagtcatatgacaattcttgtgggagaattctctc
tctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_25896133_25897284
seq2: B6Ng01-075L10.b_44_1201 (reverse)

seq1  CAAGAAGACCAAAAATTACCAATTTATCATACCAATAAATATGGAAAGGC  50
      ||||| ||||||||  ||||| |||||||  ||| |||||||| ||||||
seq2  CAAGAGGACCAAAATATACCATTTTATCA-GCCATTAAATATGAAAAGGC  49

seq1  AG-ACAAAATCCAACATCAATTCATGG-GAAAAGCCCTGAGGAGACTAAG  98
      || ||||||||| |||||||| ||||| |||||| | ||||||||||| |
seq2  AGAACAAAATCCTACATCAATCCATGGAGAAAAG-CTTGAGGAGACTAGG  98

seq1  AA-TACATAAACAC-ATTTCTACATCATG-AAGGCTGCATGTCAAAGTTA  145
      || ||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  AATTACATAAACACAATTTCTACATCATGAAAGGCTGCATGTCAAAGTTA  148

seq1  TAGCCAA-TCTTATCCTAAGTAAGGATATTTCTCAGTACTGCCA-CATAT  193
      ||||||| |||||| ||||||||||||||||||||||||||||| |||||
seq2  TAGCCAATTCTTATTCTAAGTAAGGATATTTCTCAGTACTGCCACCATAT  198

seq1  CCAGGTACAAAACAAAAACAAAAACAAAAAACTGGAGGCGGGGACATCTC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACAAAACAAAAACAAAAACAAAAAACTGGAGGCGGGGACATCTC  248

seq1  CATTCTCCATTCATATTC-AGCAAAGTGCTTGAAGTCTTCTTATGAGCAG  292
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATTCTCCATTCATATTCAAGCAAAGTGCTTGAAGTCTTCTTATGAGCAG  298

seq1  TAAGACAAGAGAAATACAAATGAGGGTCTTGCCCCTTCCTGAGCTCCTTG  342
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAGAGAAATACAAATGAGGGTCTTGCCCCTTCCTGAGCTCCTTG  348

seq1  AATCCTCTTAAATAGCTTTCAATGCCTGAGTCTCCCACCTCCTTTCAGAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTTAAATAGCTTTCAATGCCTGAGTCTCCCACCTCCTTTCAGAA  398

seq1  AAGGATATTTCAATTTCAAACCTGAGAAAATTGCTACATCAGCATCTTAG  442
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATTTCAATTTCAAACCTGAGAAAATTGCTACATCAGCATCTTAG  448

seq1  AAGAAGTGGAAACTAGAATAGAAGAGTGGCAAATTTCTGAGTGATATAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGGAAACTAGAATAGAAGAGTGGCAAATTTCTGAGTGATATAAT  498

seq1  TGCAACCATTCCACTTATATACTGCAAATGTCTCTCACTTCCACTACAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCATTCCACTTATATACTGCAAATGTCTCTCACTTCCACTACAAA  548

seq1  TTTCCCCCAAAAATGTCAGATTTCTTCAAGCTTGACTTTCCACACCTATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCAAAAATGTCAGATTTCTTCAAGCTTGACTTTCCACACCTATT  598

seq1  CTCATCTACTCCTGCATGGGAGTCCTCCCTGGTCTTAGTCCTCTCCTGTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTACTCCTGCATGGGAGTCCTCCCTGGTCTTAGTCCTCTCCTGTT  648

seq1  CAGACCAATTTTTGGTTACAGTAAAATCCCATTCTATCAGCAATAACAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAATTTTTGGTTACAGTAAAATCCCATTCTATCAGCAATAACAGG  698

seq1  TATGTAGGATAAACTTAGAAAGTGGCTTCTGTCAGCTATAATGTATCAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGATAAACTTAGAAAGTGGCTTCTGTCAGCTATAATGTATCAAA  748

seq1  AGTAATGGGACGTCATTTGCAAGTTTAAAGTATAAAAGGGTTGGAAATCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGGACGTCATTTGCAAGTTTAAAGTATAAAAGGGTTGGAAATCA  798

seq1  CCACAACAAAAATAACTATTTTCTAACTTGCAAAGAAGTCCTTTCTTATA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACAAAAATAACTATTTTCTAACTTGCAAAGAAGTCCTTTCTTATA  848

seq1  GATCATTTCTTGACTAAATTGACTAGTGTTAGCTTAGCAGTCCTATAGAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTCTTGACTAAATTGACTAGTGTTAGCTTAGCAGTCCTATAGAG  898

seq1  ACGCATATCTAAATTTGATTATAAGGTGATCCCCCGAGTAGCTCAGAAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATATCTAAATTTGATTATAAGGTGATCCCCCGAGTAGCTCAGAAGT  948

seq1  AGTCCTGAGATAAATCTTGAGAAAACAGCCACAAGTCTAATATCTAAGTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGAGATAAATCTTGAGAAAACAGCCACAAGTCTAATATCTAAGTT  998

seq1  GCAGCCAGAGAGGAGACTTGGAGCCAAGCCATCCAACATAGATGATCCTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGAGAGGAGACTTGGAGCCAAGCCATCCAACATAGATGATCCTG  1048

seq1  GATTCCCAACCTACAAAAACTAAAAGAAACCAAATATTTGTTTATAATTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCAACCTACAAAAACTAAAAGAAACCAAATATTTGTTTATAATTG  1098

seq1  CTATATTTGGGGATTATCTGCTCTGCATCATTAGATAGCTAATGTGCACT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTGGGGATTATCTGCTCTGCATCATTAGATAGCTAATGTGCACT  1148

seq1  CCATGAATTC  1152
      ||||||||||
seq2  CCATGAATTC  1158

seq1: chr1_25768442_25768975
seq2: B6Ng01-075L10.g_69_602

seq1  GAATTCATACCCAGTTATGTTTCACTGAGGGTAAATTTATCCTGGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCCAGTTATGTTTCACTGAGGGTAAATTTATCCTGGAAAAT  50

seq1  GGCACGATTTTCTCTAGCTCAGATACTAAAAGGGAGGCAGTCCACCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGATTTTCTCTAGCTCAGATACTAAAAGGGAGGCAGTCCACCTGCA  100

seq1  TGGACAGCTGCTACTTCAGAAAACCTTTGCCAGGAGGCACTATTTGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCTGCTACTTCAGAAAACCTTTGCCAGGAGGCACTATTTGATAG  150

seq1  AGTTGTGTGGGCATTATGTGTGTTGTTTTCCCCTGACAAAAGGCAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTGGGCATTATGTGTGTTGTTTTCCCCTGACAAAAGGCAAGATG  200

seq1  AGTTGGACCTGAGATTTGTGCCTTGATTTGTTTTCATGCCCTGAAACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGACCTGAGATTTGTGCCTTGATTTGTTTTCATGCCCTGAAACTTA  250

seq1  CTAGGAAACAAGGCTTGGTGCTGGCATTTTATTTGATTCTTTCCAGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAACAAGGCTTGGTGCTGGCATTTTATTTGATTCTTTCCAGAGCA  300

seq1  ATGTTAGGATTCTTTGTGAATTGTTTATCTCCCTCTAATAATGCTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGATTCTTTGTGAATTGTTTATCTCCCTCTAATAATGCTTAACA  350

seq1  TGAAAAATCAGCCTTCTATACGTTTCTAATTAGTTCTTAACAAATTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATCAGCCTTCTATACGTTTCTAATTAGTTCTTAACAAATTTTAG  400

seq1  CCTCTTTTAGGAAAAGATATATTCAGCTAATGACTCAGATATAATCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTAGGAAAAGATATATTCAGCTAATGACTCAGATATAATCTACA  450

seq1  TTCCTTTTAATCTACATTCCTGAGTCATATGACAATTCTTGTGGGAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTAATCTACATTCCTGAGTCATATGACAATTCTTGTGGGAGAAT  500

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  534
      ||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  534