BAC Information

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BAC

Clone NameB6Ng01-076B20
Chromosome1 (Build37)
Map Location 16,562,876 - 16,563,628
singlet/doubletsinglet
Overlap geneUbe2w
Upstream geneKcnb2, Ppia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2
Downstream geneTceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076B20.bB6Ng01-076B20.g
ACCDH892476DH892477
length1,183753
definitionDH892476|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B20, 5' end.DH892477|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccagagactaagaaagccagaagatcctgaacagatgttat
acagacactaagagaacacaaatgccagcacaggctactatacccagcaa
aactctcaattaccatagatggagaaaagaaagtattccatgacaaaacc
aaattcacacaatatctttccacgaacacagcccttcaaaggataataaa
gagaaaacattaacacaaatatggaaactacaccctagaaaaagcaacaa
agtaatcctttaacaaaactaaaagaagacagccacaagaacagattcct
aactttaacaacaaaaaatgacaggaagcaacaagtacttttttttttat
ttcccttaatatgaatgtactcaattccctaataaaatgacatagactaa
cagactggctacacaaacaggacccaacattttgctgcttacatgaaact
cacctcagggataaagacaacactacctcagagtaaaaggctagaaaaca
attttccaagcaaatggtctgaagaaacagctggagtagccattctaata
ttgaataaaatcggcttccaacccagagttatcaaaaaagacaaggaggg
gcacttcataatcatgaaaggtaaaatctaccaagatgaactctcaattc
tgaatatctatgctccaaatgcaagggcagccacattcattaaagaaact
ttagtaaagctcaaatcacacattgcatctaatacaataatagtgggaga
cttcaacaccccactcttaccaatgtacagatcctggaaacagaaactaa
acaaagacgcatggacactaacagaaattaagaaacaaatggatttaata
gataactacagaatattttattctaaaacaaaaggatataccttcttctc
agcacctcatggtacctcctccaaattaaccttataattgatcacaaaca
gccttaacagatacaaaatattgaaattatcccagccatcctatcagatc
acacgactaagctgatctcatacaacataaataatagaaagcacattcac
atgaaactgaacaacactctactcatgatacttggtcagagaaaataaga
ggaataagattttcaggtcatgaaatgagctacacatacccaactttatg
gacacatggaaagcaagtccttaaggagtaaac
gaattcaaactttaaaacttaatacatttccacaaaactcaagtgttcaa
ggcaggtacaaccatatcaacctaaatttattttaacatttgatctaaga
tgcagactgggatagaagaaagctttagggattttataatcattttatta
gcacattctacagaaacgtaccgcactgcaaaccttccagaatgaacaac
cattcataaaggtaaatttgtgctgccatctaaaacttatgaaatacaag
cttgtttttagtttactaaacaccatgcttgattgggtttagtaacttta
tgtaaattgtctgtgccactctaaagttcatctcaatacactggcatatg
gggtagagctcctcgccatactgtagcttatagatttaagtcggatgggt
tgtcgtgtttgtcttaaatatcttattgagatgacattcttataatccat
ctagtttggagggcattgtaggcagattgcaaacttgaggttggcctcga
aagtttagcaagagctatataagagtttatatatatttataagagtttat
aaattccccacttgtttttttcttcagtgtgttctttttcatttgaaggg
tttagtcatgccatttagcacttagaatttgaaggcaagaagatgaggag
ccagccctgtctacttagcaaggttgagagcagagtgagccacatgaacc
ctatctcagaatattgtcagattttggggtgtgtgtgtgtgtgtgtgtgt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_16562876_16563628
seq2: B6Ng01-076B20.g_68_820 (reverse)

seq1  CACACACACACACACACACACACACCCCAAAATCTGACAATATTCTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACCCCAAAATCTGACAATATTCTGAGA  50

seq1  TAGGGTTCATGTGGCTCACTCTGCTCTCAACCTTGCTAAGTAGACAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTCATGTGGCTCACTCTGCTCTCAACCTTGCTAAGTAGACAGGGC  100

seq1  TGGCTCCTCATCTTCTTGCCTTCAAATTCTAAGTGCTAAATGGCATGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCTCATCTTCTTGCCTTCAAATTCTAAGTGCTAAATGGCATGACT  150

seq1  AAACCCTTCAAATGAAAAAGAACACACTGAAGAAAAAAACAAGTGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTCAAATGAAAAAGAACACACTGAAGAAAAAAACAAGTGGGGAA  200

seq1  TTTATAAACTCTTATAAATATATATAAACTCTTATATAGCTCTTGCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAACTCTTATAAATATATATAAACTCTTATATAGCTCTTGCTAAA  250

seq1  CTTTCGAGGCCAACCTCAAGTTTGCAATCTGCCTACAATGCCCTCCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGAGGCCAACCTCAAGTTTGCAATCTGCCTACAATGCCCTCCAAAC  300

seq1  TAGATGGATTATAAGAATGTCATCTCAATAAGATATTTAAGACAAACACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGATTATAAGAATGTCATCTCAATAAGATATTTAAGACAAACACG  350

seq1  ACAACCCATCCGACTTAAATCTATAAGCTACAGTATGGCGAGGAGCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCATCCGACTTAAATCTATAAGCTACAGTATGGCGAGGAGCTCTA  400

seq1  CCCCATATGCCAGTGTATTGAGATGAACTTTAGAGTGGCACAGACAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATGCCAGTGTATTGAGATGAACTTTAGAGTGGCACAGACAATTT  450

seq1  ACATAAAGTTACTAAACCCAATCAAGCATGGTGTTTAGTAAACTAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGTTACTAAACCCAATCAAGCATGGTGTTTAGTAAACTAAAAAC  500

seq1  AAGCTTGTATTTCATAAGTTTTAGATGGCAGCACAAATTTACCTTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTATTTCATAAGTTTTAGATGGCAGCACAAATTTACCTTTATGA  550

seq1  ATGGTTGTTCATTCTGGAAGGTTTGCAGTGCGGTACGTTTCTGTAGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTTCATTCTGGAAGGTTTGCAGTGCGGTACGTTTCTGTAGAATG  600

seq1  TGCTAATAAAATGATTATAAAATCCCTAAAGCTTTCTTCTATCCCAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATAAAATGATTATAAAATCCCTAAAGCTTTCTTCTATCCCAGTCT  650

seq1  GCATCTTAGATCAAATGTTAAAATAAATTTAGGTTGATATGGTTGTACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTAGATCAAATGTTAAAATAAATTTAGGTTGATATGGTTGTACCT  700

seq1  GCCTTGAACACTTGAGTTTTGTGGAAATGTATTAAGTTTTAAAGTTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAACACTTGAGTTTTGTGGAAATGTATTAAGTTTTAAAGTTTGAA  750

seq1  TTC  753
      |||
seq2  TTC  753