BAC Information

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BAC

Clone NameB6Ng01-076K03
Chromosome1 (Build37)
Map Location 69,034,465 - 69,126,515
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076K03.bB6Ng01-076K03.g
ACCDH892845DH892846
length1,1681,046
definitionDH892845|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K03, 5' end.DH892846|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,034,465 - 69,035,649)(69,125,461 - 69,126,515)
sequence
gaattcacataaaaacaaatagtttctaagacccattgattcctatccag
aaatatactatcaaataccacatgatattccagatgatgggcaattgcat
gtttttaaatatgttaaaatgtactcagttgaaatttttcaaaaataatt
tgtcaaggcttagaaaacaaactaaattttaccaaattggcatatgatac
aaggaaataatttccactctttgtttttatcttaaaatatccatcttgtc
ttatctaaactttttatattatattatatttttagatattatatttggaa
gaaaggaaacctctctaagagtttatagttcaattactatttattattga
gtcaaaaggaaagataaatctgaaaatctttactaatacttgttcatgat
aaagtgtgtgatgtttatcagtgagaattttatcaatgtaagggctagtg
atcagaagtctcatcatttcttcatatttatagtaaagagaaatagttat
ctatatgagtaacttaagcactctattattcactaaatggagatttatgg
agcactcgctacattctagccatagtagcatgtgaaagaaaaaacagagc
tggttcctgcctgggaattttgtaggacagaaaagcaaaagatcaaattg
tgctgacagggcatatcacatcatgtcaaggcaatagtaggagttaaagg
ggccttgaacgtcctcagcataggaattacggacacttggacagaagtaa
atagcatgggagagaatctggctgtggacccaggcagggaaggtcatcat
gagaagagttgacccaacttggttagaaatagtactggacactaaggata
aaagtaacaagctataccactaaaacaatggaaacccttccctctaaaga
agagagctttctatttgtaagtaatggcacactttaaatactgagagcat
ggcagcgatgttatcctatttgcatgtatatactgatgatcattattgag
aagactgggaaaagaacgagccatttacatgtctactgcagtacgtgggt
agctacatacagagtagtgaagcttctagatacaggtagactttgggaga
acactgatggaagaattgctagcaatggatattgagaccaaattttactt
taaaattaaatgtttact
gaattcatagagcattcaaaagacctgcataaatgtaagccaagccaaac
aaaaaatgtaaaccaagcaaaatcccatctttaagaagcaaaagtggaca
cagagttccactccaaaccttgaagctatttgcaattggcaaatgagagc
agctgggagaggggagtaggttttcttcaatggagtgatactggatatat
caatcacaccccgaggcaaacaatatgctcagaaggagttaaaccacaca
gaacagagagtatagttctagttttagtttttgtgacatttgtatttttg
tttgatgtgtttgttgttgtttgtcttagagaaggaatatgaaattgact
aggggcagggaggatatgagaatagttgtggaaggggaaataatatgacc
aaaatatgaaaaacattaaaaacatattttaaaaggtgtgctttccttat
aacagtttcaatttcttattaaattgtaacactggaaatattgcaacgga
atcttacttaagaatgaggagggtcaaatgtagggtgacaagttcattca
aaccttagtcagctgactattttaagtgctttgaccctacctgtggctgt
ttctcctttgtgactgccttgtcaaaccagttcattacttctatatttta
gataaacacctagactgctgcacacttcagtttttgtttatattggaaaa
tagctatattagatttgtccaatccatcattctattaatctattagaatg
tagtagtcacataattatgttacttataaaaagtggttgtgcttttgtgt
aaagaggagtacaaagtgctctgtaagtaaccttacttagctatcacatt
taagactgtaatttattgtctgtaatttatagtaaaatataagacagctc
ttgctaaattcttacttactgagtatagtttgaagacacctaaatttata
aaccattattaagtatccattagcttctggcaaaagtatgaccttgtcgt
aggtgaacacttgaaacatatggcttacctccagagtttttccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69034465_69035649
seq2: B6Ng01-076K03.b_48_1215

seq1  GAATTCACATAAAAACAAATAGTTTCTAAGACCCATTGATTCCTATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAAAAACAAATAGTTTCTAAGACCCATTGATTCCTATCCAG  50

seq1  AAATATACTATCAAATACCACATGATATTCCAGATGATGGGCAATTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACTATCAAATACCACATGATATTCCAGATGATGGGCAATTGCAT  100

seq1  GTTTTTAAATATGTTAAAATGTACTCAGTTGAAATTTTTCAAAAATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAATATGTTAAAATGTACTCAGTTGAAATTTTTCAAAAATAATT  150

seq1  TGTCAAGGCTTAGAAAACAAACTAAATTTTACCAAATTGGCATATGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGGCTTAGAAAACAAACTAAATTTTACCAAATTGGCATATGATAC  200

seq1  AAGGAAATAATTTCCACTCTTTGTTTTTATCTTAAAATATCCATCTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATAATTTCCACTCTTTGTTTTTATCTTAAAATATCCATCTTGTC  250

seq1  TTATCTAAACTTTTTATATTATATTATATTTTTAGATATTATATTTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAAACTTTTTATATTATATTATATTTTTAGATATTATATTTGGAA  300

seq1  GAAAGGAAACCTCTCTAAGAGTTTATAGTTCAATTACTATTTATTATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAACCTCTCTAAGAGTTTATAGTTCAATTACTATTTATTATTGA  350

seq1  GTCAAAAGGAAAGATAAATCTGAAAATCTTTACTAATACTTGTTCATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGGAAAGATAAATCTGAAAATCTTTACTAATACTTGTTCATGAT  400

seq1  AAAGTGTGTGATGTTTATCAGTGAGAATTTTATCAATGTAAGGGCTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGTGATGTTTATCAGTGAGAATTTTATCAATGTAAGGGCTAGTG  450

seq1  ATCAGAAGTCTCATCATTTCTTCATATTTATAGTAAAGAGAAATAGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGTCTCATCATTTCTTCATATTTATAGTAAAGAGAAATAGTTAT  500

seq1  CTATATGAGTAACTTAAGCACTCTATTATTCACTAAATGGAGATTTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGAGTAACTTAAGCACTCTATTATTCACTAAATGGAGATTTATGG  550

seq1  AGCACTCGCTACATTCTAGCCATAGTAGCATGTGAAAGAAAAAACAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGCTACATTCTAGCCATAGTAGCATGTGAAAGAAAAAACAGAGC  600

seq1  TGGTTCCTGCCTGGGAATTTTGTAGGACAGAAAAGCAAAAGATCAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTGCCTGGGAATTTTGTAGGACAGAAAAGCAAAAGATCAAATTG  650

seq1  TGCTGACAGGGCATATCACATCATGTCAAGGCAATAGTAGGAGTTAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAGGGCATATCACATCATGTCAAGGCAATAGTAGGAGTTAAAGG  700

seq1  GGCCTTGAACGTCCTCAGCATAGGAATTACGGACACTTGGACAGAAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGAACGTCCTCAGCATAGGAATTACGGACACTTGGACAGAAGTAA  750

seq1  ATAGCATGGGAGAGAATCTGGCTGTGGACCCAGGCAGGGAAGGTCATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGGGAGAGAATCTGGCTGTGGACCCAGGCAGGGAAGGTCATCAT  800

seq1  GAGAAGAGTTGACCCAACTTGGTTAGAAATAGTACTGGACACTAAGGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGTTGACCCAACTTGGTTAGAAATAGTACTGGACACTAAGGATA  850

seq1  AAAGTAACAAGCTATACCACTAAAACAATGGAAACCCTTCCCTCTAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGTAACAAGCTATACCACTAAAACAATGGAAACCCTTCCCTCT-AAAG  899

seq1  AAGAGAGCTTTCTATTTGTAAGGTAATGGCAACACTTTAAATACTGAGAG  950
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  AAGAGAGCTTTCTATTTGTAA-GTAATGGC-ACACTTTAAATACTGAGAG  947

seq1  CATGGCAGCGATGTTATCCTATTTGCATGTAATATACTGATGATCATTAT  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATGGCAGCGATGTTATCCTATTTGCATGT-ATATACTGATGATCATTAT  996

seq1  TGAAGAAGACTGGGAAAAGAACGAGCCATTTAACATGTTCCTACTGCAGT  1050
      || |||||||||||||||||||||||||||| ||||||  ||||||||| 
seq2  TG-AGAAGACTGGGAAAAGAACGAGCCATTT-ACATGT--CTACTGCAG-  1041

seq1  TACGT-GGTAGCTACATACAGAGTAGGTGAAGCTCCTAGATACAGGGTAG  1099
      ||||| ||||||||||||||||||| |||||||| ||||||||| |||||
seq2  TACGTGGGTAGCTACATACAGAGTA-GTGAAGCTTCTAGATACA-GGTAG  1089

seq1  ACTTTGGGAG-ACACTGAATGGAAGAATTGCTAGCAATGGATATTTGAGA  1148
      |||||||||| |||||| ||||||||||||||||||||||||| ||||||
seq2  ACTTTGGGAGAACACTG-ATGGAAGAATTGCTAGCAATGGATA-TTGAGA  1137

seq1  CCCAAATTTTACTTTAAAAATATAAATGTGATTTACT  1185
       ||||||||||||||||||   ||||||   ||||||
seq2  -CCAAATTTTACTTTAAAA--TTAAATG---TTTACT  1168

seq1: chr1_69125461_69126515
seq2: B6Ng01-076K03.g_69_1114 (reverse)

seq1  TATGGAAAAACTCTTGAGCGTAAAGTCAATTGTTTTCCATGTATTCACTT  50
      |||||||||||||| ||| || ||| ||  |||||  || || ||||| |
seq2  TATGGAAAAACTCTGGAG-GT-AAGCCATATGTTT--CAAGTGTTCACCT  46

seq1  ACGACATAGGTCATACTTTTTGCCAGAGCTTATTGGATACTTAATAAATG  100
      |||||| ||||||||| ||||||||||   || |||||||||||| ||||
seq2  ACGACA-AGGTCATAC-TTTTGCCAGAAGCTAATGGATACTTAAT-AATG  93

seq1  GTTTATTAAATCTAGGTGTCTTCAAACTATACTCAGTAAGTAAGAATTTA  150
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTTA-TAAATTTAGGTGTCTTCAAACTATACTCAGTAAGTAAGAATTTA  142

seq1  GCAATGAGCTGTCTTAATATTTTACTATAAATTACAGACAATAAATTACA  200
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCAA-GAGCTGTCTT-ATATTTTACTATAAATTACAGACAATAAATTACA  190

seq1  GTCTTAAATGTGATAGCTAAGTAAGGTTACTTACAGAGCACTTTGTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAATGTGATAGCTAAGTAAGGTTACTTACAGAGCACTTTGTACTC  240

seq1  CTCTTTACACAAAAGCACAACCACTTTTTATAAGTAACATAATTATGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTACACAAAAGCACAACCACTTTTTATAAGTAACATAATTATGTGA  290

seq1  CTACTACATTCTAATAGATTAATAGAATGATGGATTGGACAAATCTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACATTCTAATAGATTAATAGAATGATGGATTGGACAAATCTAATA  340

seq1  TAGCTATTTTCCAATATAAAC-AAAACTGAAGTGTGCAGCAGTCTAGGTG  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAGCTATTTTCCAATATAAACAAAAACTGAAGTGTGCAGCAGTCTAGGTG  390

seq1  TTTATCTAAAATATAGAAGTAATGAACTGGTTTGACAAGGCAGTCACAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTAAAATATAGAAGTAATGAACTGGTTTGACAAGGCAGTCACAAA  440

seq1  GGAGAAACAGCCACAGGTAGGGTCAAAGCACTTAAAATAGTCAGCTGACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACAGCCACAGGTAGGGTCAAAGCACTTAAAATAGTCAGCTGACT  490

seq1  AAGGTTTGAATGAACTTGTCACCCTACATTTGACCCTCCTCATTCTTAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAATGAACTTGTCACCCTACATTTGACCCTCCTCATTCTTAAG  540

seq1  TAAGATTCCGTTGCAATATTTCCAGTGTTACAATTTAATAAGAAATTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCCGTTGCAATATTTCCAGTGTTACAATTTAATAAGAAATTGAA  590

seq1  ACTGTTATAAGGAAAGCACACCTTTTAAAATATGTTTTTAATGTTTTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATAAGGAAAGCACACCTTTTAAAATATGTTTTTAATGTTTTTCA  640

seq1  TATTTTGGTCATATTATTTCCCCTTCCACAACTATTCTCATATCCTCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGTCATATTATTTCCCCTTCCACAACTATTCTCATATCCTCCCT  690

seq1  GCCCCTAGTCAATTTCATATTCCTTCTCTAAGACAAACAACAACAAACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTAGTCAATTTCATATTCCTTCTCTAAGACAAACAACAACAAACAC  740

seq1  ATCAAACAAAAATACAAATGTCACAAAAACTAAAACTAGAACTATACTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACAAAAATACAAATGTCACAAAAACTAAAACTAGAACTATACTCT  790

seq1  CTGTTCTGTGTGGTTTAACTCCTTCTGAGCATATTGTTTGCCTCGGGGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTGTGGTTTAACTCCTTCTGAGCATATTGTTTGCCTCGGGGTG  840

seq1  TGATTGATATATCCAGTATCACTCCATTGAAGAAAACCTACTCCCCTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATATATCCAGTATCACTCCATTGAAGAAAACCTACTCCCCTCTC  890

seq1  CCAGCTGCTCTCATTTGCCAATTGCAAATAGCTTCAAGGTTTGGAGTGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCTCTCATTTGCCAATTGCAAATAGCTTCAAGGTTTGGAGTGGA  940

seq1  ACTCTGTGTCCACTTTTGCTTCTTAAAGATGGGATTTTGCTTGGTTTACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTGTCCACTTTTGCTTCTTAAAGATGGGATTTTGCTTGGTTTACA  990

seq1  TTTTTTGTTTGGCTTGGCTTACATTTATGCAGGTCTTTTGAATGCTCTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGGCTTGGCTTACATTTATGCAGGTCTTTTGAATGCTCTAT  1040

seq1  GAATTC  1055
      ||||||
seq2  GAATTC  1046