BAC Information

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BAC

Clone NameB6Ng01-077A18
Chromosome1 (Build37)
Map Location 97,293,326 - 97,294,040
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666025, LOC100040685, LOC383603, Tmem157
Downstream geneLOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077A18.bB6Ng01-077A18.g
ACCDH893126DH893127
length7581,142
definitionDH893126|Mus musculus domesticus DNA, BAC clone: B6Ng01-077A18, 5' end.DH893127|Mus musculus domesticus DNA, BAC clone: B6Ng01-077A18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccagcaactgatgggagcagattgatagtcctacagccaaac
attgggcagaggaaccagataggttaggcacacaccagaatatggcccac
agaatcaactgaactggactcatgggagctctcagagaacagggagcctg
tagagatctgacctaggtcctctgaatgtatgttacggctgagtagcttg
gtattttgtggaactccgaacagtaggatctggggctatctctgactgtt
ttgcctacttgtggaaccctttgattcctgccgggttgcctcgttcagcc
ttgaaataagagtgtgtgcctggtctgattgtagcttgtaatgccatatt
tggttgttgtctctgggaggcctgttttttgtttgtttgtttgtctgttt
tggttttgtttttaagagaaagaggtgggtggatcagggggagaggacag
gtggaggggagaaacttgggaaaggaagcaaggtcaaactgaagtcaaga
tgagagaatttttaaaaataaaacaataatttattatcagcagaaagata
ttatatcacatctcttttttttttcttttttaggcattttctaaggtcct
caataggagcaggagtttgatcactttgttaccagttggtggcgctgtta
agaaaggttgatccgagggtcctcccttggttatgggagtctaacaggga
acagagggagagtttccaagctttccacactcccaggtttgtgcttctct
gcttcatg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggtctagcaagc
atagaagtggatgctcacagtcgctattggatggatcacatggccccaat
gagagctagagaagtatctaagagctaaagggatctgcacactatagtgg
acacatatgactacagtacccgagctctgactctagctgccaatgcatca
agatgctagtcggccatcactgaagagaggcccatggacacgctaacttt
atgtccagatcaggggtcgtcagcttaagggaatgtgtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97293326_97294040
seq2: B6Ng01-077A18.b_86_803

seq1  ACAGCCAAACATTGGGCAGAGGAACCAGATAGGTTAGGCACACACCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAAACATTGGGCAGAGGAACCAGATAGGTTAGGCACACACCAGAA  50

seq1  TATGGCCCACAGAATCAACTGAACTGGACTCATGGGAGCTCTCAGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCCACAGAATCAACTGAACTGGACTCATGGGAGCTCTCAGAGAAC  100

seq1  AGGGAGCCTGTAGAGATCTGACCTAGGTCCTCTGAATGTATGTTACGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCCTGTAGAGATCTGACCTAGGTCCTCTGAATGTATGTTACGGCT  150

seq1  GAGTAGCTTGGTATTTTGTGGAACTCCGAACAGTAGGATCTGGGGCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCTTGGTATTTTGTGGAACTCCGAACAGTAGGATCTGGGGCTATC  200

seq1  TCTGACTGTTTTGCCTACTTGTGGAACCCTTTGATTCCTGCCGGGTTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTTTTGCCTACTTGTGGAACCCTTTGATTCCTGCCGGGTTGCC  250

seq1  TCGTTCAGCCTTGAAATAAGAGTGTGTGCCTGGTCTGATTGTAGCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCAGCCTTGAAATAAGAGTGTGTGCCTGGTCTGATTGTAGCTTGTA  300

seq1  ATGCCATATTTGGTTGTTGTCTCTGGGAGGCCTGTTTTTTGTTTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATATTTGGTTGTTGTCTCTGGGAGGCCTGTTTTTTGTTTGTTTGT  350

seq1  TTGTCTGTTTTGGTTTTGTTTTTAAGAGAAAGAGGTGGGTGGATCAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTTTGGTTTTGTTTTTAAGAGAAAGAGGTGGGTGGATCAGGGG  400

seq1  GAGAGGACAGGTGGAGGGGAGAAACTTGGGAAAGGAAGCAAGGTCAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACAGGTGGAGGGGAGAAACTTGGGAAAGGAAGCAAGGTCAAACT  450

seq1  GAAGTCAAGATGAGAGAATTTTTAAAAATAAAACAATAATTTATTATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAAGATGAGAGAATTTTTAAAAATAAAACAATAATTTATTATCAG  500

seq1  CAGAAAGATATTATATCACACCTCTTTTTTTTTTTCTTTTTTA-GCATTT  549
      |||||||||||||||||||| ||| |||||||||||||||||| ||||||
seq2  CAGAAAGATATTATATCACATCTC-TTTTTTTTTTCTTTTTTAGGCATTT  549

seq1  TCTAAGGTCCTCAATAGGAGCAGGAGTTTGATCACTTTGTTACCAGTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTCCTCAATAGGAGCAGGAGTTTGATCACTTTGTTACCAGTTGG  599

seq1  TGGCGCTGTTAAGAAAGGTTGATCCGA-GGTCCAGCCTTGGTTATGGGAG  648
      ||||||||||||||||||||||||||| |||||  |||||||||||||||
seq2  TGGCGCTGTTAAGAAAGGTTGATCCGAGGGTCCTCCCTTGGTTATGGGAG  649

seq1  TCTAACAGGGAACAGAGGGAGAG-TTCCAAGCCTTTCCACACTCCCA-GT  696
      ||||||||||||||||||||||| ||||||| ||||||||||||||| ||
seq2  TCTAACAGGGAACAGAGGGAGAGTTTCCAAG-CTTTCCACACTCCCAGGT  698

seq1  TTGTGC-TCTCTGCTTCATG  715
      |||||| |||||||||||||
seq2  TTGTGCTTCTCTGCTTCATG  718