BAC Information

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BAC

Clone NameB6Ng01-077C01
Chromosome1 (Build37)
Map Location 18,511,128 - 18,511,633
singlet/doubletsinglet
Overlap genenone
Upstream genePi15, Crispld1, LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17
Downstream geneLOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077C01.bB6Ng01-077C01.g
ACCDH893185DH893186
length500376
definitionDH893185|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C01, 5' end.DH893186|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tccttaatagggacggggtttcgttttctctctctcttgcttcttgctct
cttgcttcttacactcttgctcctgaagatgtaagaaataaagttttgcc
gcagaagattctggtctgtggtgttcttcctggccgggcgtgagaacgcg
tctaataacacagcctcataaaattaacataactcttaaaattcatacaa
tacaattttctactgccacttattttaagaattaaaatattctggaaaca
tataaacagctacctttatactgagtgaataggttatgtttaatatcata
ttttttttcagcagcaaccagtagaaaaaagaggatatgaatttgaagaa
gagtggaaaggtgtatataggaagactgtggaggcaaagggaaagggaga
aatggtcttattaaattataatattagaaaactaatattaaaaagttaaa
tatatttatgtgtgtattatgtatgtatgtatgtattgtattgtattgta


taggtagtgatatatggtcttgtcacttttggatggaaattctctttttg
gtttcactttccttctgtgtatttaggagaatgcagtgaatgtgagttgt
tttgtagaaaggacttctgagtccttgtcagttgtggtcactgggattcc
taggtagatcttgttcctaggtactgagagctgacaaatagatatcaagc
ggggctagatgggtaggtgttgtaagagtccatagaagtgattaaaaact
attccttttacaaggatctctggattccagagggaatggaagaagaaatg
gagacaagccccttaggtatttttctacaaacctggagataagactgggg
aattggggttagaggatggggaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_18511128_18511633
seq2: B6Ng01-077C01.b_48_553

seq1  GAATTCTCCTTAATAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAATAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCT  50

seq1  TGCTCTCTTGCTTCTTACACTCTTGCTCCTGAAGATGTAAGAAATAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTTGCTTCTTACACTCTTGCTCCTGAAGATGTAAGAAATAAAGT  100

seq1  TTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGGCGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGGCGTGAG  150

seq1  AACGCGTCTAATAACACAGCCTCATAAAATTAACATAACTCTTAAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCGTCTAATAACACAGCCTCATAAAATTAACATAACTCTTAAAATTC  200

seq1  ATACAATACAATTTTCTACTGCCACTTATTTTAAGAATTAAAATATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATACAATTTTCTACTGCCACTTATTTTAAGAATTAAAATATTCTG  250

seq1  GAAACATATAAACAGCTACCTTTATACTGAGTGAATAGGTTATGTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATATAAACAGCTACCTTTATACTGAGTGAATAGGTTATGTTTAAT  300

seq1  ATCATATTTTTTTTCAGCAGCAACCAGTAGAAAAAAGAGGATATGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTTTTTTTCAGCAGCAACCAGTAGAAAAAAGAGGATATGAATTT  350

seq1  GAAGAAGAGTGGAAAGGTGTATATAGGAAGACTGTGGAGGCAAAGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGTGGAAAGGTGTATATAGGAAGACTGTGGAGGCAAAGGGAAA  400

seq1  GGGAGAAATGGTCTTATTAAATTATAATATTAGAAAACTAATATTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAATGGTCTTATTAAATTATAATATTAGAAAACTAATATTAAAAA  450

seq1  GTTAAATATATTTATGTGTGTATTATGTATGTATGTATGTATTGTATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATATATTTATGTGTGTATTATGTATGTATGTATGTATTGTATTGT  500

seq1  ATTGTA  506
      ||||||
seq2  ATTGTA  506


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